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CmaCh04G028190 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G028190
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCCHC-type domain-containing protein
Genome locationCma_Chr04:18873444..18873821
RNA-Seq ExpressionCmaCh04G028190
SyntenyCmaCh04G028190
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR025314 - Domain of unknown function DUF4219


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023729348.1 uncharacterized protein LOC111877030 [Lactuca sativa]6.9e-4980.49Show/hide
Query:  MGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKK
        MGD Q+V GIKKLNN NY TW TCM  Y+QGQDLWE+VGG ET PP+ED NGALRKW+IKAGK MF+LKTTI EEMLEHI D+ TPKEAWDTF+MLFSKK
Subjt:  MGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKK

Query:  NDTRLQLLENE-LSTSQRDMTIA
        NDTRLQLLENE LS SQRDMTIA
Subjt:  NDTRLQLLENE-LSTSQRDMTIA

XP_023746410.1 uncharacterized protein LOC111894574 [Lactuca sativa]4.0e-4982.11Show/hide
Query:  MGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKK
        MGD Q+V GIKKLNN NY TW TCM  YLQGQDLWE+VGG ET PP+ED NGALRKW+IKAGK MFALKTTI EEMLEHI D+ TPKEAWDTFV LFSKK
Subjt:  MGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKK

Query:  NDTRLQLLENE-LSTSQRDMTIA
        NDTRLQLLENE LS SQRDMTIA
Subjt:  NDTRLQLLENE-LSTSQRDMTIA

XP_023749568.1 uncharacterized protein LOC111897860 [Lactuca sativa]4.0e-4982.11Show/hide
Query:  MGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKK
        MGD Q+V GIKKLNN NY TW TCM  YLQGQDLWE+VGG ET PP+ED NGALRKW+IKAGK MFALKTTI EEMLEHI D+ TPKEAWDTFV LFSKK
Subjt:  MGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKK

Query:  NDTRLQLLENE-LSTSQRDMTIA
        NDTRLQLLENE LS SQRDMTIA
Subjt:  NDTRLQLLENE-LSTSQRDMTIA

XP_023758851.1 uncharacterized protein LOC111907314 [Lactuca sativa]4.0e-4982.11Show/hide
Query:  MGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKK
        MGD Q+V GIKKLNN NY TW TCM  YLQGQDLWE+VGG ET PP+ED NGALRKW+IKAGK MFALKTTI EEMLEHI D+ TPKEAWDTFV LFSKK
Subjt:  MGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKK

Query:  NDTRLQLLENE-LSTSQRDMTIA
        NDTRLQLLENE LS SQRDMTIA
Subjt:  NDTRLQLLENE-LSTSQRDMTIA

XP_023761520.1 uncharacterized protein LOC111909959 [Lactuca sativa]1.5e-4881.3Show/hide
Query:  MGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKK
        MGD Q++ GIKKLNN NY TW TCM  YLQGQDLWE+VGG ET PP+ED NGALRKW+IKAGK MFALKTTI EEMLEHI D+ T KEAWDTFVMLFSKK
Subjt:  MGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKK

Query:  NDTRLQLLENE-LSTSQRDMTIA
        NDTRLQLLENE LS SQRDMTIA
Subjt:  NDTRLQLLENE-LSTSQRDMTIA

TrEMBL top hitse value%identityAlignment
A0A2N9EU58 L-ascorbate oxidase5.3e-4777.34Show/hide
Query:  MANTMGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCE-TMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVM
        + +TMGD Q+V GIKKLNNKNY TWATC+  YLQGQDLWE+VGG E T P  ED++G LRKW+IKAGK MFALKTTI EEMLEHI D KTPKEAWDTF  
Subjt:  MANTMGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCE-TMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVM

Query:  LFSKKNDTRLQLLENE-LSTSQRDMTIA
        LFSKKNDTRLQLLENE LS +QRDMTIA
Subjt:  LFSKKNDTRLQLLENE-LSTSQRDMTIA

A0A2N9EVT7 CCHC-type domain-containing protein1.8e-4778.12Show/hide
Query:  MANTMGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCE-TMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVM
        + +TMGD Q+V GIKKLNNKNY TWATC+  YLQGQDLWE+VGG E T P  ED++G LRKW+IKAGK MFALKTTI EEMLEHI D KTPKEAWDTFV 
Subjt:  MANTMGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCE-TMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVM

Query:  LFSKKNDTRLQLLENE-LSTSQRDMTIA
        LFSKKNDTRLQLLENE LS +QRDMTIA
Subjt:  LFSKKNDTRLQLLENE-LSTSQRDMTIA

A0A2N9EYD8 Uncharacterized protein1.8e-4778.12Show/hide
Query:  MANTMGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCE-TMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVM
        + +TMGD Q+V GIKKLNNKNY TWATC+  YLQGQDLWE+VGG E T P  ED++G LRKW+IKAGK MFALKTTI EEMLEHI D KTPKEAWDTFV 
Subjt:  MANTMGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCE-TMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVM

Query:  LFSKKNDTRLQLLENE-LSTSQRDMTIA
        LFSKKNDTRLQLLENE LS +QRDMTIA
Subjt:  LFSKKNDTRLQLLENE-LSTSQRDMTIA

A0A2N9HXV3 Uncharacterized protein1.8e-4778.12Show/hide
Query:  MANTMGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCE-TMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVM
        + +TMGD Q+V GIKKLNNKNY TWATC+  YLQGQDLWE+VGG E T P  ED++G LRKW+IKAGK MFALKTTI EEMLEHI D KTPKEAWDTFV 
Subjt:  MANTMGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCE-TMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVM

Query:  LFSKKNDTRLQLLENE-LSTSQRDMTIA
        LFSKKNDTRLQLLENE LS +QRDMTIA
Subjt:  LFSKKNDTRLQLLENE-LSTSQRDMTIA

A0A2N9I986 CCHC-type domain-containing protein1.8e-4778.12Show/hide
Query:  MANTMGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCE-TMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVM
        + +TMGD Q+V GIKKLNNKNY TWATC+  YLQGQDLWE+VGG E T P  ED++G LRKW+IKAGK MFALKTTI EEMLEHI D KTPKEAWDTFV 
Subjt:  MANTMGDFQIVRGIKKLNNKNY-TWATCMMPYLQGQDLWEIVGGCE-TMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVM

Query:  LFSKKNDTRLQLLENE-LSTSQRDMTIA
        LFSKKNDTRLQLLENE LS +QRDMTIA
Subjt:  LFSKKNDTRLQLLENE-LSTSQRDMTIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACACGATGGGTGATTTCCAAATCGTTAGAGGAATCAAGAAACTCAACAATAAAAACTACACGTGGGCAACATGCATGATGCCCTATTTACAAGGACAAGATCT
TTGGGAGATCGTTGGCGGGTGTGAAACTATGCCGCCAAAGGAGGATTCTAACGGCGCCTTGCGTAAATGGAGAATCAAAGCAGGCAAAACAATGTTTGCCTTGAAGACCA
CAATCGGAGAAGAGATGTTAGAACATATTTGGGATGACAAGACACCGAAAGAAGCATGGGACACATTCGTGATGTTGTTCTCAAAGAAGAACGATACAAGGCTACAACTC
CTGGAGAATGAGTTGTCAACTTCACAACGTGACATGACAATTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACACGATGGGTGATTTCCAAATCGTTAGAGGAATCAAGAAACTCAACAATAAAAACTACACGTGGGCAACATGCATGATGCCCTATTTACAAGGACAAGATCT
TTGGGAGATCGTTGGCGGGTGTGAAACTATGCCGCCAAAGGAGGATTCTAACGGCGCCTTGCGTAAATGGAGAATCAAAGCAGGCAAAACAATGTTTGCCTTGAAGACCA
CAATCGGAGAAGAGATGTTAGAACATATTTGGGATGACAAGACACCGAAAGAAGCATGGGACACATTCGTGATGTTGTTCTCAAAGAAGAACGATACAAGGCTACAACTC
CTGGAGAATGAGTTGTCAACTTCACAACGTGACATGACAATTGCTTAG
Protein sequenceShow/hide protein sequence
MANTMGDFQIVRGIKKLNNKNYTWATCMMPYLQGQDLWEIVGGCETMPPKEDSNGALRKWRIKAGKTMFALKTTIGEEMLEHIWDDKTPKEAWDTFVMLFSKKNDTRLQL
LENELSTSQRDMTIA