CuGenDBv2

Gene ID	CmaCh04G028450
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	thylakoid membrane protein slr0575
Genome location	Cma_Chr04:18992230..18996600
RNA-Seq Expression	CmaCh04G028450
Synteny	CmaCh04G028450
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021275 - Protein of unknown function DUF2854

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004141498.1 uncharacterized protein LOC101213350 [Cucumis sativus]

1.5e-134

85.62

Show/hide

Query:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS
        ++ ISP   L  CSHD+FTL NRLSLVSL FSRP    SLPGG N   R N FVH E    L KP RLAF+FS RAAD+TQPS+VSASP KAVVTDDEFS
Subjt:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE

Query:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FEAKALTLSDFEKRQAKFASFFGPGI AEVGKG+NDLYEVRL SNTIPGASP
Subjt:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP

XP_022134099.1 uncharacterized protein LOC111006453 [Momordica charantia]

5.5e-134

85.91

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Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        M GISP A LCS D+F+L NRL + SL   R   A S P GGN NG A F VHLEPR  +QK QRL FTFSARAAD+TQPSSVSASPD+AVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIRYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCL L+FEAKAL LSDFE+RQAKFASFFGPGI AEVGKG+N+LYEVRLISNTIP ASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

XP_022956448.1 uncharacterized protein LOC111458174 [Cucurbita moschata]

1.5e-160

99.31

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Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVH EPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

XP_022989929.1 uncharacterized protein LOC111486968 [Cucurbita maxima]

1.8e-161

100

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Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

XP_023524489.1 uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo]

2.9e-159

98.28

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Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGN NGRANFFVH EPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFN+LPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDV+RYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVX1 Uncharacterized protein

7.0e-135

85.62

Show/hide

Query:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS
        ++ ISP   L  CSHD+FTL NRLSLVSL FSRP    SLPGG N   R N FVH E    L KP RLAF+FS RAAD+TQPS+VSASP KAVVTDDEFS
Subjt:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE

Query:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FEAKALTLSDFEKRQAKFASFFGPGI AEVGKG+NDLYEVRL SNTIPGASP
Subjt:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP

A0A5A7TDN5 Thylakoid membrane protein

4.6e-134

84.93

Show/hide

Query:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS
        ++ ISP   L   SH +FTL NRLSL+SL FSRP    SLPGGGN   R N FVH E +  L KP RLAFTFS RAAD+TQPS+VSASPDKAVVTDDEFS
Subjt:  MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDE

Query:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP
        ALKRIFQ+GLAGGIPRRSAPIL+SIREEVTEDGKYCLVL+FEAKALTLSDFE+RQAKFASFFGPGI AEVGKG+NDLYEVRLISN+IPGASP
Subjt:  ALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASP

A0A6J1BXU7 uncharacterized protein LOC111006453

2.7e-134

85.91

Show/hide

Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        M GISP A LCS D+F+L NRL + SL   R   A S P GGN NG A F VHLEPR  +QK QRL FTFSARAAD+TQPSSVSASPD+AVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIRYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCL L+FEAKAL LSDFE+RQAKFASFFGPGI AEVGKG+N+LYEVRLISNTIP ASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

A0A6J1GWV5 uncharacterized protein LOC111458174

7.5e-161

99.31

Show/hide

Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVH EPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

A0A6J1JQQ4 uncharacterized protein LOC111486968

8.8e-162

100

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Query:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
        MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA
Subjt:  MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLA

Query:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
        KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL
Subjt:  KVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEAL

Query:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
        KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS
Subjt:  KRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

SwissProt top hits

e value

%identity

Alignment

Q55403 Thylakoid membrane protein slr0575

4.9e-24

40.86

Show/hide

Query:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL--TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHL
        L K+S   +GL VG  L   GF AY   L  +  +     YG PL + G+ALK AELKP+P    T  +   LR   ATP   Q+R DV RYRYG E HL
Subjt:  LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL--TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHL

Query:  DEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLIS
        DE+L+R+   GL+     R  P+L S+ E+  E GKY L L F +  ++L  ++++Q K A FFGP +   V + +  +  V LIS
Subjt:  DEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLIS

Arabidopsis top hits

e value

%identity

Alignment

AT5G38660.1 acclimation of photosynthesis to environment

1.0e-93

77.13

Show/hide

Query:  KPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL
        K + L      RAAD+T  S   AS D+ ++ DDEF+LAK+SFGVIGLG+G+SLLSYGFGAYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL
Subjt:  KPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL

Query:  TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFG
        +Y +A KLRESCATPIL QVR+DV RYRYGDEQHL+EALKRIFQ+GL GGIPRRSAPILQ IREEV  DG+YC+VL+FEAKALTLSDFEKRQAKF SFFG
Subjt:  TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFG

Query:  PGIAAEVGKGDND-LYEVRLISN
        P I AEVGKG+++ LYEVRLISN
Subjt:  PGIAAEVGKGDND-LYEVRLISN

AT5G38660.2 acclimation of photosynthesis to environment

2.4e-87

77.29

Show/hide

Query:  KPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL
        K + L      RAAD+T  S   AS D+ ++ DDEF+LAK+SFGVIGLG+G+SLLSYGFGAYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL
Subjt:  KPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCL

Query:  TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFG
        +Y +A KLRESCATPIL QVR+DV RYRYGDEQHL+EALKRIFQ+GL GGIPRRSAPILQ IREEV  DG+YC+VL+FEAKALTLSDFEKRQAKF SFFG
Subjt:  TYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFG

Query:  PGIAAEV
        P I AEV
Subjt:  PGIAAEV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGTGGAATATCGCCTCCTGCTGCTCTCTGTTCTCATGACAAATTCACTCTCCCCAATCGCCTCTCCCTTGTTTCTCTGCGTTTCTCTCGTCCCTACTGCGCAACCTC
TCTGCCAGGCGGCGGCAACCGAAACGGTAGAGCCAACTTTTTCGTCCATCTCGAACCGAGAGCTCCTCTGCAGAAGCCTCAACGTTTAGCTTTCACATTCTCGGCTAGAG
CTGCTGATACTACTCAGCCGTCTTCTGTTTCAGCCTCGCCGGACAAAGCAGTAGTTACCGATGATGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTTATTGGCTTAGGT
GTTGGAATTTCTTTGTTGTCGTATGGATTCGGTGCATACTTTAATATCCTCCCAGGATCCGAGTGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCAATTATTGG
CATGGCTCTGAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATATTTAGAAGCTCAAAAGCTGAGGGAATCATGCGCCACCCCTATTCTCAAGCAGGTAAGAGATG
ATGTGATAAGGTACCGCTATGGGGATGAACAACATTTGGATGAGGCATTGAAACGGATTTTCCAGTTTGGTCTGGCTGGGGGAATTCCTCGAAGGAGTGCACCTATTTTG
CAAAGTATTCGTGAAGAAGTTACAGAAGACGGAAAATATTGCCTGGTCTTGATGTTTGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGAAAAGACAGGCAAAATTTGC
TTCTTTCTTTGGACCAGGGATCGCTGCTGAAGTTGGGAAGGGAGACAATGATCTGTATGAAGTCCGGCTTATTTCTAACACTATTCCTGGTGCTTCACCATCATAA

mRNA sequence

Show/hide mRNA sequence

ATTCTCGTTAACCACCGGAGCTTCATTTTCTTCTCCGTTCTTCAGAGTTTCAGAGACAGGTAGAAAGAAAGATAGTCGATTTCGATGAGTGGAATATCGCCTCCTGCTGC
TCTCTGTTCTCATGACAAATTCACTCTCCCCAATCGCCTCTCCCTTGTTTCTCTGCGTTTCTCTCGTCCCTACTGCGCAACCTCTCTGCCAGGCGGCGGCAACCGAAACG
GTAGAGCCAACTTTTTCGTCCATCTCGAACCGAGAGCTCCTCTGCAGAAGCCTCAACGTTTAGCTTTCACATTCTCGGCTAGAGCTGCTGATACTACTCAGCCGTCTTCT
GTTTCAGCCTCGCCGGACAAAGCAGTAGTTACCGATGATGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTTATTGGCTTAGGTGTTGGAATTTCTTTGTTGTCGTATGG
ATTCGGTGCATACTTTAATATCCTCCCAGGATCCGAGTGGTCTGCCATTATGCTAACATATGGCTTCCCTCTTGCAATTATTGGCATGGCTCTGAAGTATGCTGAACTCA
AACCAGTGCCATGCTTGACATATTTAGAAGCTCAAAAGCTGAGGGAATCATGCGCCACCCCTATTCTCAAGCAGGTAAGAGATGATGTGATAAGGTACCGCTATGGGGAT
GAACAACATTTGGATGAGGCATTGAAACGGATTTTCCAGTTTGGTCTGGCTGGGGGAATTCCTCGAAGGAGTGCACCTATTTTGCAAAGTATTCGTGAAGAAGTTACAGA
AGACGGAAAATATTGCCTGGTCTTGATGTTTGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGAAAAGACAGGCAAAATTTGCTTCTTTCTTTGGACCAGGGATCGCTG
CTGAAGTTGGGAAGGGAGACAATGATCTGTATGAAGTCCGGCTTATTTCTAACACTATTCCTGGTGCTTCACCATCATAAAATATACGGTTTTAATCGAATTCTACATAT
AATTGTTTCATTTACAAACTGCTGTTCACTAGTGAAGTTCTGGTAAGTATATATTTCTTTGGAAACACTGCACTCAAAATCATCCGATCTCTAATGTTTATAAAAAGTGA
AACATACATAAAAAAAAAATATTTAGAAAGAGAAAAATCTGACATCCAAGATGGTTTCCTTCCTGAATTTAGAATGGCATCTCCAAAAGACCATGAAGAAGATGATGTAA
AAACAGTTCGTTCTTAATATAGGACATTCTAGCTTACCTATACCTATTCCGGAACTACTTCACATGATGCACACTTGGTTATTTGATTAATGAAATTACCCTTAGTATAG
TCACAGAAATAAGAAATGTATCCTAGCAAACTACAAGCTACAGTCTAGAAGGCACCCAATGCGGTACACATGCCCATAAACATGTGCATTATTGGCTTGCGTATGCCAAT
GCCAATATTGATTATAGCTTTACCTCAACTTAGTGAAGTAGAATAGCCTC

Protein sequence

Show/hide protein sequence

MSGISPPAALCSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRAPLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLG
VGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPILKQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPIL
QSIREEVTEDGKYCLVLMFEAKALTLSDFEKRQAKFASFFGPGIAAEVGKGDNDLYEVRLISNTIPGASPS

CmaCh04G028450 (gene) of Cucurbita maxima (Rimu) v1.1 genome