CuGenDBv2

Gene ID	CmaCh04G028760
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	HIG1 domain-containing protein
Genome location	Cma_Chr04:19113524..19114228
RNA-Seq Expression	CmaCh04G028760
Synteny	CmaCh04G028760
Gene Ontology terms	GO:0033617 - mitochondrial respiratory chain complex IV assembly (biological process) GO:0005746 - mitochondrial respirasome (cellular component) GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
InterPro domains	IPR007667 - Hypoxia induced protein, domain IPR040153 - Respiratory supercomplex factor 2, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6578469.1 hypothetical protein SDJN03_22917, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-29

81.61

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Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPG
        MEAIQAW+S+HKLTSIGALWASGIGASL YTRS TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE +  GV      SA  VPG
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPG

KAG6602595.1 hypothetical protein SDJN03_07828, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-29

97.22

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Query:  GALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK
        GALWASGIGASLVYT+SRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRT+VSASAVPGK
Subjt:  GALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK

KAG7016034.1 BTB/POZ domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.2e-29

83.53

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Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAV
        MEAIQAW+S+HKLTSIGALWASGIGASL YTRS TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE +  GV  R+E   SAV
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAV

KAG7033273.1 hypothetical protein SDJN02_07327, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-38

97.73

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Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK
        MEAIQAWISEHKLTSIGALWASGIGASLVYT+SRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRT+VSASAVPGK
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK

XP_004138401.1 uncharacterized protein LOC101218681 [Cucumis sativus]

1.4e-27

79.55

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Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK
        MEAIQAW+SEHKLT+IGALWASGIGASL YTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY  + K   DR+E    +  GK
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK

TrEMBL top hits

e value

%identity

Alignment

A0A067JNW4 HIG1 domain-containing protein

2.8e-26

77.33

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Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVA
        ME +Q+W+S+HKLTSIGALWA+ +G SL YTR+RTPLKPSLRLIHARMHAQA+TLAVLSGAA+YHYYEK+++ VA
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVA

A0A0A0K7T4 HIG1 domain-containing protein

6.6e-28

79.55

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Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK
        MEAIQAW+SEHKLT+IGALWASGIGASL YTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY  + K   DR+E    +  GK
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK

A0A5A7UEZ1 Respiratory supercomplex factor 2-like protein

1.5e-27

78.41

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Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK
        MEAIQAW+SEHKLT+IGALWASG+GASL YTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYY  + K   DR+E    +  GK
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK

A0A5J5AU49 HIG1 domain-containing protein

1.8e-25

85.51

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Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEK
        MEA+Q+W+SEHKLTSIG LWAS IGASL Y+R++TPLKPSLRLIHARMHAQALTLAVLSGAA YHYYEK
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEK

A0A7J7I509 HIG1 domain-containing protein

1.2e-26

88.41

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Query:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEK
        MEA+Q+W+SEHKLTSIG LWASGIGASL Y+R++TPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEK
Subjt:  MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G05550.1 Hypoxia-responsive family protein

1.5e-16

55.22

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Query:  EAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE
        E I+ W+S+HKL ++G LW SGI  S+ Y  S+  +K S+++IHAR+HAQALTLA L+GAAV  YY+
Subjt:  EAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYE

AT5G27760.1 Hypoxia-responsive family protein

4.0e-17

55.41

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Query:  IQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADR
        I+ WI EHKL ++G LW SGI  S+ Y  S+  +K S+R+IHAR+HAQALTLA L+GAA   YY+  K G  DR
Subjt:  IQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGCCATTCAAGCTTGGATTTCTGAACACAAACTCACCAGCATTGGAGCTCTGTGGGCGTCTGGGATTGGAGCCTCGCTGGTGTACACAAGATCAAGAACT
CCCCTGAAGCCAAGTCTCCGGCTTATCCATGCCAGGATGCATGCTCAGGCTTTGACATTGGCGGTTCTTTCCGGCGCCGCCGTCTACCACTACTACGAGAAGGAG
AAGAAAGGCGTTGCCGACCGAACCGAGGTTTCCGCTTCCGCCGTGCCGGGGAAGTAG

mRNA sequence

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CTTAGCTCAGTGATAAACACAGTAAAAAACATCAACAATGGAAGCCATTCAAGCTTGGATTTCTGAACACAAACTCACCAGCATTGGAGCTCTGTGGGCGTCTGG
GATTGGAGCCTCGCTGGTGTACACAAGATCAAGAACTCCCCTGAAGCCAAGTCTCCGGCTTATCCATGCCAGGATGCATGCTCAGGCTTTGACATTGGCGGTTCT
TTCCGGCGCCGCCGTCTACCACTACTACGAGAAGGAGAAGAAAGGCGTTGCCGACCGAACCGAGGTTTCCGCTTCCGCCGTGCCGGGGAAGTAGGATTGCCGGTG
TACGGGGACGGAAAGGGAATGGATTAGCTGATGACGTCGGGTTCTTAGGGGATCAAATCAGTTTGTGTAAATGAAATGAAGGATATTAAATTTGATCCTTTTAAT
TGATGTGTCTGTAGCCATGAGTGGCAAAGCTTTAAGCTCGGTGTCGGCGAATTGTTAATCCTTCAATAAAATAAAAGAATGAGTTTAGATAACTCTTTTAATTTT
TATAAATAAAATACAAGG

Protein sequence

Show/hide protein sequence

MEAIQAWISEHKLTSIGALWASGIGASLVYTRSRTPLKPSLRLIHARMHAQALTLAVLSGAAVYHYYEKEKKGVADRTEVSASAVPGK

CmaCh04G028760 (gene) of Cucurbita maxima (Rimu) v1.1 genome