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CmaCh04G030360 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G030360
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic
Genome locationCma_Chr04:19824932..19825501
RNA-Seq ExpressionCmaCh04G030360
SyntenyCmaCh04G030360
Gene Ontology termsNA
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033428.1 hypothetical protein SDJN02_07484 [Cucurbita argyrosperma subsp. argyrosperma]4.9e-6298.23Show/hide
Query:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
        MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNK RSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDC GCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
Subjt:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC

Query:  GKGGLTPEQRGER
        GKGGLTPEQRGER
Subjt:  GKGGLTPEQRGER

XP_022152486.1 uncharacterized protein LOC111020203 [Momordica charantia]1.5e-3973.21Show/hide
Query:  SSVSKSNNSTFPFPF----PPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCG
        S  S + N+ FPFPF    PPH   I P NK + + SNI F AA  FSLPKRCQ CGGKGAIDC GCKGTG+NKKNGNIFERWKCFECQGFGLKSCP+CG
Subjt:  SSVSKSNNSTFPFPF----PPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCG

Query:  KGGLTPEQRGER
         GGLTPEQRGER
Subjt:  KGGLTPEQRGER

XP_022963874.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita moschata]4.1e-6197.35Show/hide
Query:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
        MAWCGSSVSKSNNST PFPFPPHGFAILPQNK RSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDC GCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
Subjt:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC

Query:  GKGGLTPEQRGER
        GKGGLTPEQRGER
Subjt:  GKGGLTPEQRGER

XP_022990183.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita maxima]2.6e-63100Show/hide
Query:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
        MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
Subjt:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC

Query:  GKGGLTPEQRGER
        GKGGLTPEQRGER
Subjt:  GKGGLTPEQRGER

XP_023521952.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like [Cucurbita pepo subsp. pepo]1.3e-6299.12Show/hide
Query:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
        MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDC GCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
Subjt:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC

Query:  GKGGLTPEQRGER
        GKGGLTPEQRGER
Subjt:  GKGGLTPEQRGER

TrEMBL top hitse value%identityAlignment
A0A0A0LIM5 Uncharacterized protein6.1e-3473.74Show/hide
Query:  FPFPPHGFAILPQNKSRSKPSNI--PFAAAPKFS-LPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCGKGGLTPEQRGER
        FPFP +    + ++K +S P++I  PFAA P  + LPKRCQ CGGKGAIDC GCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGGLTPEQRGER
Subjt:  FPFPPHGFAILPQNKSRSKPSNI--PFAAAPKFS-LPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCGKGGLTPEQRGER

A0A1S3C9W1 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic2.1e-3466.97Show/hide
Query:  SVSKSNNSTFPFPFPPHGFAILPQNKSRSKPS-NIPFAAAPKFS-LPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCGKGG
        + + ++ S   FPFP +    + ++K++S P+  +PFAA P  + LPKRCQ CGGKGAIDC GCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGG
Subjt:  SVSKSNNSTFPFPFPPHGFAILPQNKSRSKPS-NIPFAAAPKFS-LPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCGKGG

Query:  LTPEQRGER
        LTPEQRGER
Subjt:  LTPEQRGER

A0A6J1DHW0 uncharacterized protein LOC1110202037.4e-4073.21Show/hide
Query:  SSVSKSNNSTFPFPF----PPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCG
        S  S + N+ FPFPF    PPH   I P NK + + SNI F AA  FSLPKRCQ CGGKGAIDC GCKGTG+NKKNGNIFERWKCFECQGFGLKSCP+CG
Subjt:  SSVSKSNNSTFPFPF----PPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCG

Query:  KGGLTPEQRGER
         GGLTPEQRGER
Subjt:  KGGLTPEQRGER

A0A6J1HLG5 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic2.0e-6197.35Show/hide
Query:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
        MAWCGSSVSKSNNST PFPFPPHGFAILPQNK RSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDC GCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
Subjt:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC

Query:  GKGGLTPEQRGER
        GKGGLTPEQRGER
Subjt:  GKGGLTPEQRGER

A0A6J1JSI3 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic1.3e-63100Show/hide
Query:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
        MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC
Subjt:  MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDC

Query:  GKGGLTPEQRGER
        GKGGLTPEQRGER
Subjt:  GKGGLTPEQRGER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22630.1 unknown protein1.8e-3081.54Show/hide
Query:  SLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCGKGGLTPEQRGER
        S+ K C+TCG KGAI+C GCKGTG+NKKNGN+FERWKCF+CQGFG+KSCP CGKGGLTPEQRGER
Subjt:  SLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCGKGGLTPEQRGER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGGTGTGGCAGCTCTGTCTCAAAGAGCAACAACAGCACCTTCCCGTTCCCATTCCCACCCCATGGATTCGCCATACTGCCACAAAATAAAAGTAGAAGT
AAACCATCCAACATCCCCTTCGCTGCAGCGCCAAAATTTTCGCTGCCCAAAAGGTGCCAAACGTGTGGAGGTAAAGGGGCTATCGATTGTACCGGATGCAAGGGG
ACTGGGAGAAACAAGAAAAACGGAAACATCTTCGAGCGTTGGAAATGTTTCGAGTGCCAAGGATTTGGATTAAAGAGCTGCCCTGACTGTGGAAAAGGAGGACTC
ACCCCCGAACAAAGGGGAGAAAGATAA
mRNA sequenceShow/hide mRNA sequence
AGGAGAATTGACAACAGTAAAGCCCAAAGAAAGGAAGATGGCGTGGTGTGGCAGCTCTGTCTCAAAGAGCAACAACAGCACCTTCCCGTTCCCATTCCCACCCCA
TGGATTCGCCATACTGCCACAAAATAAAAGTAGAAGTAAACCATCCAACATCCCCTTCGCTGCAGCGCCAAAATTTTCGCTGCCCAAAAGGTGCCAAACGTGTGG
AGGTAAAGGGGCTATCGATTGTACCGGATGCAAGGGGACTGGGAGAAACAAGAAAAACGGAAACATCTTCGAGCGTTGGAAATGTTTCGAGTGCCAAGGATTTGG
ATTAAAGAGCTGCCCTGACTGTGGAAAAGGAGGACTCACCCCCGAACAAAGGGGAGAAAGATAA
Protein sequenceShow/hide protein sequence
MAWCGSSVSKSNNSTFPFPFPPHGFAILPQNKSRSKPSNIPFAAAPKFSLPKRCQTCGGKGAIDCTGCKGTGRNKKNGNIFERWKCFECQGFGLKSCPDCGKGGL
TPEQRGER