CuGenDBv2

Gene ID	CmaCh05G000180
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	cytochrome b-c1 complex subunit 8-like
Genome location	Cma_Chr05:89191..91415
RNA-Seq Expression	CmaCh05G000180
Synteny	CmaCh05G000180
Gene Ontology terms	GO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process) GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domains	IPR020101 - Cytochrome b-c1 complex subunit 8, plants IPR036642 - Cytochrome b-c1 complex subunit 8 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8652039.1 hypothetical protein Csa_018553 [Cucumis sativus]

1.3e-23

63.92

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQSWRQTRPNYGWVSSFCEFRLKYCLH-IHVRTAVQGE
        MGKQPVRMKAV+YALSPFQQK MSGLWNDL+GKIHHKISENWISA LLITPVVG+YT  ++        +  +  F     +   H   VRTAVQGE
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQSWRQTRPNYGWVSSFCEFRLKYCLH-IHVRTAVQGE

TQD81377.1 hypothetical protein C1H46_033095 [Malus baccata]

1.9e-22

54.35

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQSWRQTRPNYGWVSSFCEFRLKYCLHIHVRTA
        MGK PV+M+AV+YALSPFQQK M GLW D TGKIHHK+SENW+SATLL+TP+V TY+ +     Q +  + W+   C+F+L   L + + +A
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQSWRQTRPNYGWVSSFCEFRLKYCLHIHVRTA

XP_008444338.1 PREDICTED: cytochrome b-c1 complex subunit 8-like [Cucumis melo]

1.9e-22

88.52

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ
        MGKQPVRMKAVIYALSPFQQK MSGLWNDL+GKIHHKISENWISA LLITPVVG+YT + Q
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ

XP_022951208.1 cytochrome b-c1 complex subunit 8-like [Cucurbita moschata]

1.3e-23

93.44

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ
        MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISA LLITPVVGTYT   Q
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ

XP_022961649.1 cytochrome b-c1 complex subunit 8-like [Cucurbita moschata]

3.4e-24

95.08

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ
        MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYT   Q
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UYV6 Cytochrome b-c1 complex subunit 8-like

9.1e-23

88.52

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ
        MGKQPVRMKAVIYALSPFQQK MSGLWNDL+GKIHHKISENWISA LLITPVVG+YT + Q
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ

A0A6J1GH36 cytochrome b-c1 complex subunit 8-like

6.3e-24

93.44

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ
        MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISA LLITPVVGTYT   Q
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ

A0A6J1HEN4 cytochrome b-c1 complex subunit 8-like

1.7e-24

95.08

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ
        MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYT   Q
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ

A0A6J1K5M6 cytochrome b-c1 complex subunit 8-like

1.7e-24

95.08

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ
        MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYT   Q
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ

A0A6J1KUK4 cytochrome b-c1 complex subunit 8-like

6.3e-24

93.44

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ
        MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISA LLITPVVGTYT   Q
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQ

SwissProt top hits

e value

%identity

Alignment

P46269 Cytochrome b-c1 complex subunit 8

2.8e-21

74.58

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCI
        MGKQPV++KAV+YA+SPFQQK M GLW DL GKIHHK+SENWISATLL+ P+VGTY+ +
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCI

Q9FLB7 Cytochrome b-c1 complex subunit 8-2, mitochondrial

3.1e-20

75.44

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYT
        MGKQPV++KAV+YALSPFQQK M+GLW DL  KIHHK+SENWIS  LL+ PVVGTY+
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYT

Q9SG91 Cytochrome b-c1 complex subunit 8-1, mitochondrial

5.7e-22

82.14

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTY
        MGKQPV++KAV+YALSPFQQK M+GLW DL  KIHHK+SENWISATLL+TPVVGTY
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTY

Arabidopsis top hits

e value

%identity

Alignment

AT3G10860.1 Cytochrome b-c1 complex, subunit 8 protein

4.0e-23

82.14

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTY
        MGKQPV++KAV+YALSPFQQK M+GLW DL  KIHHK+SENWISATLL+TPVVGTY
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTY

AT5G05370.1 Cytochrome b-c1 complex, subunit 8 protein

2.2e-21

75.44

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Query:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYT
        MGKQPV++KAV+YALSPFQQK M+GLW DL  KIHHK+SENWIS  LL+ PVVGTY+
Subjt:  MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGAAGCAACCTGTTCGGATGAAGGCTGTGATCTATGCCTTATCGCCGTTCCAGCAGAAGACCATGTCAGGGTTATGGAACGACTTGACCGGCAAGATTCAC
CATAAGATCTCCGAGAACTGGATCAGTGCCACCCTTCTAATCACCCCCGTCGTCGGAACCTACACATGTATTATGCAGTCTTGGCGTCAGACGAGACCAAATTAT
GGATGGGTCTCGAGTTTTTGTGAATTTCGATTGAAGTATTGTTTGCATATACATGTACGCACAGCAGTACAAGGAGAATGA

mRNA sequence

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ATGGAATTGAAACTAAAATTCTTTCCATTTAATTTTTATTCATACAGCTTTCTCGAGCCGATTTTAGAAAATAAAAAAGGGGAAAAAAAAACGCAATACGATTTC
TCAAGCGTCCGATAGGTAGAAAATCCAACGGTGAGTGTTAGTTTGAAGTACGCAGTTTCTCGAAGAGTCTGGCTTAGATTTGAGAGCAAGAACCCAACCCCTTTC
GACCCAAAAGCCGCCATCTTCATCGTAATCTCCTGAGGCATTCGATAGCCGCGTTTGAAGAAGAGTTAGGATCGCCATGGGGAAGCAACCTGTTCGGATGAAGGC
TGTGATCTATGCCTTATCGCCGTTCCAGCAGAAGACCATGTCAGGGTTATGGAACGACTTGACCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGC
CACCCTTCTAATCACCCCCGTCGTCGGAACCTACACATGTATTATGCAGTCTTGGCGTCAGACGAGACCAAATTATGGATGGGTCTCGAGTTTTTGTGAATTTCG
ATTGAAGTATTGTTTGCATATACATGTACGCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGGTACTGAAAGCGCCTGGACCTTGAAGAAGTCAAAATGG
AGCTCTGATTTCTTAGGCTATGAGGATGTGCTTTTATTTTGAGGAACATTTTCTCACTTGTTTGTTGGAATAAATTACTACATTTTTTTTTGTCGATCAGTGTTA
CACGCATTGGAATGATGCGAACTGATGCGTAATCGCCACCCTCTGCAGACTTCTCAATACCAACCGAACTTCTAAGACTCCGATTAGATTCCATGATATCAAAGT
ATCAACCATTTTTTTTTCTCCATTTTCTCCTCCTCTTTACATTAATTACACCTCCATCCTCCCTATTATGCTCCTGATTCGTTAAATCACCAAAATTCAGTACTA
TGTTAGTGTGATACACCTTTTTTTAATTTAAAATTGTAATTGAAAAATGATGTGGGATCCAATGAAATGTTCTAGAAGAGAAAAATCAGCGATGCAATGGTGGTA
CTCCCATGGGCAGTGACTCGAAAAATGGCCCAAG

Protein sequence

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MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTCIMQSWRQTRPNYGWVSSFCEFRLKYCLHIHVRTAVQGE

CmaCh05G000180 (gene) of Cucurbita maxima (Rimu) v1.1 genome