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CmaCh05G001070 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh05G001070
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionArabinogalactan peptide
Genome locationCma_Chr05:460870..462424
RNA-Seq ExpressionCmaCh05G001070
SyntenyCmaCh05G001070
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585732.1 CXXC motif containing zinc binding protein, partial [Cucurbita argyrosperma subsp. sororia]7.1e-1083.64Show/hide
Query:  SLVALIAIIFAVASVAATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI
        SL+ALIA+I AVASVAA EAPAPSPASPA+SIAPSFVSAC A FVAL  GSTLRI
Subjt:  SLVALIAIIFAVASVAATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI

KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0655.41Show/hide
Query:  NHPNKQISESMAGVSQASLVALIAIIFAVASVA---ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLR
        NH   +I  +MA VS+ S +AL+A++F V SVA   + E+PAP+PASPATS+ PS   ACV AFVAL FGS L+
Subjt:  NHPNKQISESMAGVSQASLVALIAIIFAVASVA---ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLR

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]3.4e-5293.28Show/hide
Query:  FRCCFSSSQVSAVGKEIPVKNPKPEKKSAAESKGAPIDGSYHSHLSSLNLFRSLSSSPSSRRNHPNKQISESMAGVSQASLVALIAIIFAVASVAATEAP
        FRCCFSSSQVSAVGKEIPVKNPKPEKKSAAE KGAPIDG      SSLNLFRSLSSSPSSRRNHPN+QISESMAGVSQASLVALIAI+FAVASVAATEAP
Subjt:  FRCCFSSSQVSAVGKEIPVKNPKPEKKSAAESKGAPIDGSYHSHLSSLNLFRSLSSSPSSRRNHPNKQISESMAGVSQASLVALIAIIFAVASVAATEAP

Query:  APSPASPATSIAPSFVSACVAAFVALAFGSTLRI
        APSPASPATSIAPSFVSACVAAFVALAFGSTLRI
Subjt:  APSPASPATSIAPSFVSACVAAFVALAFGSTLRI

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-0656.52Show/hide
Query:  QISESMAGVSQASLVALIAIIFAVASVA---ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLR
        +I  +MA VS+ S +AL+A++F V SVA   + E+PAP+PASPATS+ PS   ACV AFVAL FGS L+
Subjt:  QISESMAGVSQASLVALIAIIFAVASVA---ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLR

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]4.4e-1267.95Show/hide
Query:  SPSSRRNHPNKQISESMAGVSQASLVALIAIIFAVASVAATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI
        SP+S        +   MA +S+ SL+ALIA+IFA++SVAA EAPAPSPASPATSIAPS VSAC+AAF+ALAFGSTLRI
Subjt:  SPSSRRNHPNKQISESMAGVSQASLVALIAIIFAVASVAATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein2.1e-1267.95Show/hide
Query:  SPSSRRNHPNKQISESMAGVSQASLVALIAIIFAVASVAATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI
        SP+S        +   MA +S+ SL+ALIA+IFA++SVAA EAPAPSPASPATSIAPS VSAC+AAF+ALAFGSTLRI
Subjt:  SPSSRRNHPNKQISESMAGVSQASLVALIAIIFAVASVAATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI

A0A2P5DTQ4 Arabinogalactan peptide3.9e-0660Show/hide
Query:  AGVSQASLVALIAIIFAVASVA----ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI
        A  S ASL+ L+A+I  V SV     A EAPAPSPASPA++I+PSF+SAC+AA VAL FGS +R+
Subjt:  AGVSQASLVALIAIIFAVASVA----ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI

A0A2P5EL16 Arabinogalactan peptide6.7e-0661.29Show/hide
Query:  SQASLVALIAIIFAVASVA----ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI
        S ASL+ L+A+I  V SV     A EAPAPSPASPA++I+PSF+SAC+AA VAL FGS +R+
Subjt:  SQASLVALIAIIFAVASVA----ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI

A0A2Z6NC77 Uncharacterized protein1.9e-0567.27Show/hide
Query:  LVALIAIIFAVASVA-ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI
        L+A +A+IF+V S+A A +APAPSPASPATS++PSFV+  VAA  ALAFGS LRI
Subjt:  LVALIAIIFAVASVA-ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI

Q96504 CRG161.9e-0557.81Show/hide
Query:  MAGVSQASLVALIAIIFAVASVA---ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLR
        MA VS+ S +AL+A++FAV SVA   + E+PAP PASPA S+ PS   ACV AF+AL FGS L+
Subjt:  MAGVSQASLVALIAIIFAVASVA---ATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLR

SwissProt top hitse value%identityAlignment
Q9LYF6 Arabinogalactan protein 151.1e-0555.93Show/hide
Query:  VSQASLVALIAIIFAVASVAATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI
        +S+AS+V L+ +I +V + A +EAPAPSP S +++I+ SFVSA VAA  AL FGS LRI
Subjt:  VSQASLVALIAIIFAVASVAATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI

Arabidopsis top hitse value%identityAlignment
AT5G11740.1 arabinogalactan protein 157.8e-0755.93Show/hide
Query:  VSQASLVALIAIIFAVASVAATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI
        +S+AS+V L+ +I +V + A +EAPAPSP S +++I+ SFVSA VAA  AL FGS LRI
Subjt:  VSQASLVALIAIIFAVASVAATEAPAPSPASPATSIAPSFVSACVAAFVALAFGSTLRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTCTTCTCTCGAAAGTTCCGCTGTTGCTTCTCCTCATCCCAAGTCTCCGCCGTCGGGAAGGAGATTCCGGTTAAGAATCCAAAACCGGAGAAGAAATCGGCGGC
GGAGAGCAAGGGAGCTCCGATTGACGGTTCCTATCATTCTCACTTGTCTTCTCTCAATCTCTTTCGATCCCTCTCTTCGTCTCCTTCCTCTCGCCGGAACCACCCTAACA
AGCAAATATCTGAATCAATGGCCGGCGTTTCCCAAGCTTCTCTCGTGGCTCTCATTGCCATCATCTTCGCCGTCGCCTCCGTCGCTGCTACTGAGGCTCCCGCCCCCAGC
CCTGCCTCCCCTGCTACCTCCATTGCTCCGTCATTCGTCTCCGCTTGCGTCGCTGCCTTCGTTGCTCTCGCCTTCGGATCTACTCTCAGGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGATTCTTCTCTCGAAAGTTCCGCTGTTGCTTCTCCTCATCCCAAGTCTCCGCCGTCGGGAAGGAGATTCCGGTTAAGAATCCAAAACCGGAGAAGAAATCGGCGGC
GGAGAGCAAGGGAGCTCCGATTGACGGTTCCTATCATTCTCACTTGTCTTCTCTCAATCTCTTTCGATCCCTCTCTTCGTCTCCTTCCTCTCGCCGGAACCACCCTAACA
AGCAAATATCTGAATCAATGGCCGGCGTTTCCCAAGCTTCTCTCGTGGCTCTCATTGCCATCATCTTCGCCGTCGCCTCCGTCGCTGCTACTGAGGCTCCCGCCCCCAGC
CCTGCCTCCCCTGCTACCTCCATTGCTCCGTCATTCGTCTCCGCTTGCGTCGCTGCCTTCGTTGCTCTCGCCTTCGGATCTACTCTCAGGATCTGA
Protein sequenceShow/hide protein sequence
MRFFSRKFRCCFSSSQVSAVGKEIPVKNPKPEKKSAAESKGAPIDGSYHSHLSSLNLFRSLSSSPSSRRNHPNKQISESMAGVSQASLVALIAIIFAVASVAATEAPAPS
PASPATSIAPSFVSACVAAFVALAFGSTLRI