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CmaCh05G001380 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh05G001380
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionMitochondrial GTPase 1
Genome locationCma_Chr05:607917..608645
RNA-Seq ExpressionCmaCh05G001380
SyntenyCmaCh05G001380
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029304.1 DAR GTPase 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4078.23Show/hide
Query:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL
        M AATLMRKIGSAINEAAIGSRI+SGWYD HMAAASRAVVERIPLVDFVLEVRDAR                     IPKTSEYELMKNY  SSKRIIIL
Subjt:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL

Query:  NKTDLADRSQTEVRNFCNFRDYRS
        NKTDLADRSQTEVRNFCNFRD+RS
Subjt:  NKTDLADRSQTEVRNFCNFRDYRS

XP_022997354.1 DAR GTPase 2, mitochondrial isoform X1 [Cucurbita maxima]2.1e-3781.25Show/hide
Query:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL
        MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDAR                     IPKTSEYELMKNYLPSSKRIIIL
Subjt:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL

Query:  NKTDLADRSQTE
        NKTDLADRSQTE
Subjt:  NKTDLADRSQTE

XP_022997355.1 DAR GTPase 2, mitochondrial isoform X2 [Cucurbita maxima]5.4e-3877.5Show/hide
Query:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL
        MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDAR                     IPKTSEYELMKNYLPSSKRIIIL
Subjt:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL

Query:  NKTDLADRSQTEVRNFCNFR
        NKTDLADRSQTE   F   R
Subjt:  NKTDLADRSQTEVRNFCNFR

XP_023546448.1 DAR GTPase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]3.3e-3578.57Show/hide
Query:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL
        M AATLMRKIGSAINEAAIGSRI+SGWYDPHMAAASRAVVERIPLVDFVLEVRDARV                     PKTSEYELMKNY PSSKRIIIL
Subjt:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL

Query:  NKTDLADRSQTE
        NKTDLADRSQTE
Subjt:  NKTDLADRSQTE

XP_023546449.1 DAR GTPase 2, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]1.1e-3575Show/hide
Query:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL
        M AATLMRKIGSAINEAAIGSRI+SGWYDPHMAAASRAVVERIPLVDFVLEVRDARV                     PKTSEYELMKNY PSSKRIIIL
Subjt:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL

Query:  NKTDLADRSQTEVRNFCNFR
        NKTDLADRSQTE   F   R
Subjt:  NKTDLADRSQTEVRNFCNFR

TrEMBL top hitse value%identityAlignment
A0A1S3BAJ4 DAR GTPase 2, mitochondrial isoform X21.7e-2967.26Show/hide
Query:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL
        M AATLMRKIG+AINE A G+RI+SGWYD HMAAASRAV ERIPLVDFVLEVRDAR                     IP +SEYE+MKN+ PSSKRII+L
Subjt:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL

Query:  NKTDLADRSQTEV
        NKTDLAD+ QTEV
Subjt:  NKTDLADRSQTEV

A0A6J1HE44 DAR GTPase 2, mitochondrial isoform X13.9e-3476.79Show/hide
Query:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL
        M AATLMRKIGSAINEAA+GSRI+SGWYDPHMAAASRAVVERIPLVDFVLEVRDAR                     IPKTSEYELMKNY  SSKRIIIL
Subjt:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL

Query:  NKTDLADRSQTE
        NKTDLADRSQTE
Subjt:  NKTDLADRSQTE

A0A6J1HGD6 DAR GTPase 2, mitochondrial isoform X21.0e-3473.33Show/hide
Query:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL
        M AATLMRKIGSAINEAA+GSRI+SGWYDPHMAAASRAVVERIPLVDFVLEVRDAR                     IPKTSEYELMKNY  SSKRIIIL
Subjt:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL

Query:  NKTDLADRSQTEVRNFCNFR
        NKTDLADRSQTE   F   R
Subjt:  NKTDLADRSQTEVRNFCNFR

A0A6J1K9C8 Mitochondrial GTPase 12.6e-3877.5Show/hide
Query:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL
        MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDAR                     IPKTSEYELMKNYLPSSKRIIIL
Subjt:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL

Query:  NKTDLADRSQTEVRNFCNFR
        NKTDLADRSQTE   F   R
Subjt:  NKTDLADRSQTEVRNFCNFR

A0A6J1KB62 DAR GTPase 2, mitochondrial isoform X11.0e-3781.25Show/hide
Query:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL
        MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDAR                     IPKTSEYELMKNYLPSSKRIIIL
Subjt:  MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIIL

Query:  NKTDLADRSQTE
        NKTDLADRSQTE
Subjt:  NKTDLADRSQTE

SwissProt top hitse value%identityAlignment
B7GGD6 Ribosome biogenesis GTPase A2.2e-0533.33Show/hide
Query:  ITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLADRSQTE
        +T  W+  HMA A R V E++ L+D V E+ DAR                     IP +S   L+   + +  RII+LNK D+AD   T+
Subjt:  ITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLADRSQTE

C5D8U8 Ribosome biogenesis GTPase A7.5e-0633.33Show/hide
Query:  ITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLADRSQTE
        +T  W+  HMA A R V E++ L+D V E+ DAR                     IP +S   ++   L +  RI++LNK D+AD + TE
Subjt:  ITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLADRSQTE

O82497 DAR GTPase 2, mitochondrial8.8e-1547.57Show/hide
Query:  LMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLP-SSKRIIILNKTD
        + R+IG A+ +A+        WY PHMAAA RA+ ERIPLVDFVLE+RDAR                     IP +SEYEL++ + P  SKRII+LNK +
Subjt:  LMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLP-SSKRIIILNKTD

Query:  LAD
        LAD
Subjt:  LAD

Q65JP4 Ribosome biogenesis GTPase A3.7e-0533.72Show/hide
Query:  WYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLADRSQTE
        W+  HMA A R V E++ L+D V E+ DAR                     IP +S   ++++ L +  RI++LNK D AD S T+
Subjt:  WYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLADRSQTE

Q8L607 Short integuments 2, mitochondrial4.4e-0638.27Show/hide
Query:  WYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLAD
        W+  HMAAA+RA+  R+ L D V+EVRDAR                     IP +S  E +++ + + +RII LNK DLA+
Subjt:  WYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLAD

Arabidopsis top hitse value%identityAlignment
AT2G41670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein3.1e-0738.27Show/hide
Query:  WYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLAD
        W+  HMAAA+RA+  R+ L D V+EVRDAR                     IP +S  E +++ + + +RII LNK DLA+
Subjt:  WYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLAD

AT4G02790.1 GTP-binding family protein9.3e-0429.11Show/hide
Query:  WYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDL
        WY  H+    + + E++ L+D V+EVRDAR                     IP ++ +  M  +L + KRI++LN+ D+
Subjt:  WYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDL

AT4G10650.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein6.2e-1647.57Show/hide
Query:  LMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLP-SSKRIIILNKTD
        + R+IG A+ +A+        WY PHMAAA RA+ ERIPLVDFVLE+RDAR                     IP +SEYEL++ + P  SKRII+LNK +
Subjt:  LMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLP-SSKRIIILNKTD

Query:  LAD
        LAD
Subjt:  LAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCGGCAACGTTGATGAGAAAAATAGGTTCGGCTATTAACGAAGCGGCTATCGGAAGCCGCATCACCAGCGGATGGTACGATCCTCACATGGCGGCTGCTTCTCG
CGCTGTCGTCGAACGAATTCCACTAGTCGATTTTGTTCTCGAAGTTAGAGATGCTAGGGTTCAATCCTTTCGGAAACCTGGATTTGTTTATTCCTATATGTGGCGTTTCG
GTTCGTCTTCGATTCCGAAGACGTCTGAATATGAACTCATGAAAAATTATCTACCGTCATCAAAACGAATCATTATATTGAACAAGACGGACCTGGCGGATCGATCACAG
ACAGAGGTTCGGAACTTCTGTAACTTCCGTGATTATCGGTCATTTTAG
mRNA sequenceShow/hide mRNA sequence
AACTCGGTCGTAGAGGATCTCTCTTTCGACCCGCGAAAGACCAAATAACCTTTCGAGTCTACACGTCGATTTTGAAGTTTTGGAGCCTAAATGGACGCGGCAACGTTGAT
GAGAAAAATAGGTTCGGCTATTAACGAAGCGGCTATCGGAAGCCGCATCACCAGCGGATGGTACGATCCTCACATGGCGGCTGCTTCTCGCGCTGTCGTCGAACGAATTC
CACTAGTCGATTTTGTTCTCGAAGTTAGAGATGCTAGGGTTCAATCCTTTCGGAAACCTGGATTTGTTTATTCCTATATGTGGCGTTTCGGTTCGTCTTCGATTCCGAAG
ACGTCTGAATATGAACTCATGAAAAATTATCTACCGTCATCAAAACGAATCATTATATTGAACAAGACGGACCTGGCGGATCGATCACAGACAGAGGTTCGGAACTTCTG
TAACTTCCGTGATTATCGGTCATTTTAG
Protein sequenceShow/hide protein sequence
MDAATLMRKIGSAINEAAIGSRITSGWYDPHMAAASRAVVERIPLVDFVLEVRDARVQSFRKPGFVYSYMWRFGSSSIPKTSEYELMKNYLPSSKRIIILNKTDLADRSQ
TEVRNFCNFRDYRSF