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CmaCh05G003680 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh05G003680
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionFlotillin-like
Genome locationCma_Chr05:1639943..1640431
RNA-Seq ExpressionCmaCh05G003680
SyntenyCmaCh05G003680
Gene Ontology termsGO:0009877 - nodulation (biological process)
GO:0016324 - apical plasma membrane (cellular component)
GO:0044853 - plasma membrane raft (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2627773.1 unnamed protein product [Spirodela intermedia]1.0e-0442.5Show/hide
Query:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNA-------KFSIEDETRVI
        ++ + K  W++       F+++ VNYTF+V+AM AEK    LP +FTI P S+DM+SLLK A       K S   ETRV+
Subjt:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNA-------KFSIEDETRVI

KAF3328004.1 flotillin-like protein 3 [Carex littledalei]6.1e-0547.62Show/hide
Query:  NVSIPKNKWV------ITFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        ++ + K  W+      + F++T VNYTF+V+AM AEK    LP +FTI P +EDMD+LLK AK
Subjt:  NVSIPKNKWV------ITFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

KGN62970.1 hypothetical protein Csa_022496 [Cucumis sativus]4.7e-0546.27Show/hide
Query:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        +   ++ + K  WV+       F+++ VNYTF+V+AM AEK    LP +FTI P S+DMDSLLK AK
Subjt:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

XP_011649835.2 LOW QUALITY PROTEIN: flotillin-like protein 4 [Cucumis sativus]4.7e-0546.27Show/hide
Query:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        +   ++ + K  WV+       F+++ VNYTF+V+AM AEK    LP +FTI P S+DMDSLLK AK
Subjt:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

XP_027907078.1 flotillin-like protein 4 [Vigna unguiculata]1.4e-0446.27Show/hide
Query:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        +  K++ + K  WV+       F+L+ VNYTF+V+AM AEK    LP +FTI P  +D DSLLK AK
Subjt:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

TrEMBL top hitse value%identityAlignment
A0A0A0LM23 Flotillin-like2.3e-0546.27Show/hide
Query:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        +   ++ + K  WV+       F+++ VNYTF+V+AM AEK    LP +FTI P S+DMDSLLK AK
Subjt:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

A0A2N9J9D0 Flotillin-like1.5e-0444.78Show/hide
Query:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        +  K++ + K  WV+       F+++ VNYTF+V+AM AEK    LP +FTI P  +D DSLLK AK
Subjt:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

A0A392R0J7 Flotillin-like (Fragment)1.1e-0443.28Show/hide
Query:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        +  K++ + K  W++       F+L+ VNYTF+V+AM AEK    LP +FTI P ++D +SLLK AK
Subjt:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

A0A7I8JAA5 Flotillin-like5.1e-0542.5Show/hide
Query:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNA-------KFSIEDETRVI
        ++ + K  W++       F+++ VNYTF+V+AM AEK    LP +FTI P S+DM+SLLK A       K S   ETRV+
Subjt:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNA-------KFSIEDETRVI

A0A7I8L280 Flotillin-like8.6e-0546.03Show/hide
Query:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        ++ + K  W++       F+++ VNYTF+V+AM AEK    LP +FTI P S+DM+SLLK AK
Subjt:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

SwissProt top hitse value%identityAlignment
D2XNQ8 Flotillin-like protein 15.8e-0646.03Show/hide
Query:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        +V + K  W+        F+L+ VNYTF+V+AM AEK    LP +FTI P  +D +SLLK AK
Subjt:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

D2XNQ9 Flotillin-like protein 27.5e-0643.75Show/hide
Query:  KNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        K++ + K  W+         +L+ VNYTF+V+AM AEK    LP +FTI P  +D +SLLK AK
Subjt:  KNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

D2XNR0 Flotillin-like protein 35.8e-0644.44Show/hide
Query:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        ++ + K  W+        F+L+ VNYTF+V+AM AEK    LP +FTI P  +D +SLLK AK
Subjt:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

D2XNR1 Flotillin-like protein 45.2e-0744.78Show/hide
Query:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        I  K++ + K  W++       F+L+ VNYTF+V+AM AEK    LP +FTI P  +D +SLLK AK
Subjt:  INSKNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

D2XNR2 Flotillin-like protein 65.8e-0643.75Show/hide
Query:  KNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        K++ + K  W++        +L+ VNYTF+V+AM AEK    LP +FTI P  +D +SLLK AK
Subjt:  KNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

Arabidopsis top hitse value%identityAlignment
AT5G25250.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family5.9e-0640.62Show/hide
Query:  KNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        +++ + K  WV        F+++ VNYTFKV+AM AEK    LP +FTI P  +D D+L+  A+
Subjt:  KNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

AT5G25260.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family1.0e-0539.06Show/hide
Query:  KNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK
        +++ + K  WV        F+++ VNYTFKV+AM AEK    LP +FTI P  +D ++L+  A+
Subjt:  KNVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEK----LPTIFTIDPCSEDMDSLLKNAK

AT5G64870.1 SPFH/Band 7/PHB domain-containing membrane-associated protein family2.5e-0438.98Show/hide
Query:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEKL----PTIFTIDPCSEDMDSLL
        ++ + K  WV        F+++ VNYTF+V+AM +EKL    P +FTI P  +D  +LL
Subjt:  NVSIPKNKWVI------TFNLTLVNYTFKVEAMRAEKL----PTIFTIDPCSEDMDSLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTACTTGTTTTGGTGTATCAATTCAAAAAATGTGTCGATTCCAAAGAATAAATGGGTAATTACCTTCAATCTCACTTTGGTCAACTACACCTTCAAAGTT
GAAGCCATGAGAGCCGAGAAGCTCCCCACCATCTTCACCATCGACCCCTGCTCTGAAGACATGGATAGCCTCCTCAAGAATGCCAAGTTCTCTATTGAGGACGAG
ACCCGAGTGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTACTTGTTTTGGTGTATCAATTCAAAAAATGTGTCGATTCCAAAGAATAAATGGGTAATTACCTTCAATCTCACTTTGGTCAACTACACCTTCAAAGTT
GAAGCCATGAGAGCCGAGAAGCTCCCCACCATCTTCACCATCGACCCCTGCTCTGAAGACATGGATAGCCTCCTCAAGAATGCCAAGTTCTCTATTGAGGACGAG
ACCCGAGTGATTTAG
Protein sequenceShow/hide protein sequence
MGYLFWCINSKNVSIPKNKWVITFNLTLVNYTFKVEAMRAEKLPTIFTIDPCSEDMDSLLKNAKFSIEDETRVI