; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh05G005140 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh05G005140
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRibonuclease H-like domain-containing protein
Genome locationCma_Chr05:2450747..2452555
RNA-Seq ExpressionCmaCh05G005140
SyntenyCmaCh05G005140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598704.1 hypothetical protein SDJN03_08482, partial [Cucurbita argyrosperma subsp. sororia]8.1e-9589.52Show/hide
Query:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS
        MSI+SVS  SA+LRS V SRRHGSNLNLSHLLH+A SLP PRTIPKNR THITTYRDMAVY   G GGGLGSPLP PPPPPPLTPWPLWVAGAVLSAILS
Subjt:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS

Query:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG
        IWKTTKYW PFLMLKQRVEKVVHVAEDVVDMVETAA+EVDKV+E I DHLPKDSILQKTAVLVENTAETVAKDANLAA+IIGKVEKFDDGL+SLIKKKGG
Subjt:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG

Query:  SKEGDAKPKP
        SKEGDAKPKP
Subjt:  SKEGDAKPKP

KAG7029646.1 hypothetical protein SDJN02_07986, partial [Cucurbita argyrosperma subsp. argyrosperma]7.4e-9690Show/hide
Query:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS
        MSI+SVS  SA+LRS V SRRHGSNLNLSHLLH+A SLP PRTIPKNR THITTYRDMAVY   G GGGLGSPLP PPPPPPLTPWPLWVAGAVLSAILS
Subjt:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS

Query:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG
        IWKTTKYW PFLMLKQRVEKVVHVAEDVVDMVETAA+EVDKV+EEI DHLPKDSILQKTAVLVENTAETVAKDANLAA+IIGKVEKFDDGL+SLIKKKGG
Subjt:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG

Query:  SKEGDAKPKP
        SKEGDAKPKP
Subjt:  SKEGDAKPKP

XP_022962246.1 uncharacterized protein LOC111462754 [Cucurbita moschata]1.3e-9590Show/hide
Query:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS
        MSI+SVS  SA+LRS V SRRHGSNLNLSHLLH+A SLP PRTIPKNR THITTYRDMAVY   G GGGLGSPLP PPPPPPLTPWPLWVAGAVLSAILS
Subjt:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS

Query:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG
        IWKTTKYW PFLMLKQRVEKVVHVAEDVVDMVETAA+EVDKV+EEI DHLPKDSILQKTAVLVENTAETVAKDANLAA+IIGKVEKFDDGL+SLIKKKGG
Subjt:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG

Query:  SKEGDAKPKP
        SKEGDAKPKP
Subjt:  SKEGDAKPKP

XP_022997266.1 uncharacterized protein LOC111492223 [Cucurbita maxima]3.4e-109100Show/hide
Query:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS
        MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS
Subjt:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS

Query:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG
        IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG
Subjt:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG

Query:  SKEGDAKPKP
        SKEGDAKPKP
Subjt:  SKEGDAKPKP

XP_023546969.1 uncharacterized protein LOC111805911 [Cucurbita pepo subsp. pepo]1.5e-9691.43Show/hide
Query:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS
        MSIVSVS  SASLRST +SR HGSNLNLSHLLHKA SLPFPRTIPKNR THITTYRDMAVY   G GGGLGSPLP PPPPPPLTPWPLWVAGAVLSAILS
Subjt:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS

Query:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG
        IWKTTKYW PFLMLKQRVEKVVHVAEDVVDMVETAA+EVDKV+EEI DHLPKDSILQKTAVLVEN AETVAKDANLAAEIIGKVEKFDDGL+SLIKKKGG
Subjt:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG

Query:  SKEGDAKPKP
        SKEGDAKPKP
Subjt:  SKEGDAKPKP

TrEMBL top hitse value%identityAlignment
A0A1S3BDR2 uncharacterized protein LOC1034885524.3e-2546.81Show/hide
Query:  MSIVSVSYSSASLRS-TVQS---RRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLS
        M I+S+S SS    S T++S    R GS+LNL   LH   SL  P T P   + + T  R MA++     G      LP P  P   TP  LW+AG VLS
Subjt:  MSIVSVSYSSASLRS-TVQS---RRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLS

Query:  AILSIWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKV
        AILSIWKT  YW PFLMLK++V+ VV  AE+  +M ET A  VDK +E+I +HLP  S LQKTA  V++ A+ + KDA+LA +   KV
Subjt:  AILSIWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKV

A0A5A7VBX0 Uncharacterized protein4.3e-2546.81Show/hide
Query:  MSIVSVSYSSASLRS-TVQS---RRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLS
        M I+S+S SS    S T++S    R GS+LNL   LH   SL  P T P   + + T  R MA++     G      LP P  P   TP  LW+AG VLS
Subjt:  MSIVSVSYSSASLRS-TVQS---RRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLS

Query:  AILSIWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKV
        AILSIWKT  YW PFLMLK++V+ VV  AE+  +M ET A  VDK +E+I +HLP  S LQKTA  V++ A+ + KDA+LA +   KV
Subjt:  AILSIWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKV

A0A6J1BVN6 uncharacterized protein LOC1110051388.7e-2644.24Show/hide
Query:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRT---IPKNRVTHIT---TYRD-MAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGA
        MSIVSV  S  S        RHGS +NLS    K   LPF  T   + K    H+T    YR  MA+Y G G G       P  P  P   PWPLW+ G 
Subjt:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRT---IPKNRVTHIT---TYRD-MAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGA

Query:  VLSAILSIWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSS
        ++SAIL  +   K W PFL+L Q V+KVV   E+V +MVETAA+ V+KV+EE+ +HLP+   LQK A+ +EN A+T++KDA++A +I+ K+E+ +D + S
Subjt:  VLSAILSIWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSS

Query:  LIKKKGGSK-EGDAKPK
          KK G +K E DA+ K
Subjt:  LIKKKGGSK-EGDAKPK

A0A6J1HCK6 uncharacterized protein LOC1114627546.1e-9690Show/hide
Query:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS
        MSI+SVS  SA+LRS V SRRHGSNLNLSHLLH+A SLP PRTIPKNR THITTYRDMAVY   G GGGLGSPLP PPPPPPLTPWPLWVAGAVLSAILS
Subjt:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS

Query:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG
        IWKTTKYW PFLMLKQRVEKVVHVAEDVVDMVETAA+EVDKV+EEI DHLPKDSILQKTAVLVENTAETVAKDANLAA+IIGKVEKFDDGL+SLIKKKGG
Subjt:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG

Query:  SKEGDAKPKP
        SKEGDAKPKP
Subjt:  SKEGDAKPKP

A0A6J1K717 uncharacterized protein LOC1114922231.6e-109100Show/hide
Query:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS
        MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS
Subjt:  MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILS

Query:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG
        IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG
Subjt:  IWKTTKYWGPFLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGG

Query:  SKEGDAKPKP
        SKEGDAKPKP
Subjt:  SKEGDAKPKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCGTTTCGGTTTCTTACTCTTCAGCCAGCCTTCGTTCCACCGTCCAGTCCCGCCGCCATGGATCAAACCTTAACCTCAGCCATCTCCTTCACAAAGCCAACAG
TTTGCCGTTCCCACGCACAATTCCCAAAAACAGAGTCACCCATATCACGACTTACAGAGACATGGCGGTTTACGGCGGCGGCGGCGGCGGCGGCGGCCTTGGATCTCCCC
TTCCTCAGCCGCCTCCTCCTCCCCCTTTGACTCCTTGGCCATTGTGGGTAGCTGGGGCGGTGCTATCGGCAATTCTATCCATTTGGAAGACGACCAAATATTGGGGGCCT
TTTCTTATGTTGAAGCAGAGAGTGGAGAAGGTGGTGCATGTGGCGGAGGACGTGGTAGATATGGTGGAGACGGCGGCGAAGGAAGTGGATAAGGTGTCGGAAGAGATTGT
CGATCATCTCCCCAAAGACAGCATACTCCAAAAAACGGCAGTTTTAGTGGAAAATACAGCTGAAACCGTTGCTAAGGACGCCAATTTGGCGGCGGAAATTATCGGCAAGG
TGGAGAAATTTGACGACGGGTTGAGCTCATTAATTAAGAAGAAAGGAGGAAGTAAAGAAGGCGACGCAAAACCCAAACCCTAG
mRNA sequenceShow/hide mRNA sequence
TCCCATTCCTTCACAAATGTCGATCGTTTCGGTTTCTTACTCTTCAGCCAGCCTTCGTTCCACCGTCCAGTCCCGCCGCCATGGATCAAACCTTAACCTCAGCCATCTCC
TTCACAAAGCCAACAGTTTGCCGTTCCCACGCACAATTCCCAAAAACAGAGTCACCCATATCACGACTTACAGAGACATGGCGGTTTACGGCGGCGGCGGCGGCGGCGGC
GGCCTTGGATCTCCCCTTCCTCAGCCGCCTCCTCCTCCCCCTTTGACTCCTTGGCCATTGTGGGTAGCTGGGGCGGTGCTATCGGCAATTCTATCCATTTGGAAGACGAC
CAAATATTGGGGGCCTTTTCTTATGTTGAAGCAGAGAGTGGAGAAGGTGGTGCATGTGGCGGAGGACGTGGTAGATATGGTGGAGACGGCGGCGAAGGAAGTGGATAAGG
TGTCGGAAGAGATTGTCGATCATCTCCCCAAAGACAGCATACTCCAAAAAACGGCAGTTTTAGTGGAAAATACAGCTGAAACCGTTGCTAAGGACGCCAATTTGGCGGCG
GAAATTATCGGCAAGGTGGAGAAATTTGACGACGGGTTGAGCTCATTAATTAAGAAGAAAGGAGGAAGTAAAGAAGGCGACGCAAAACCCAAACCCTAGACCAACCTCTT
CAATCAAATATTCAAATATTATATTTATAATAATATACTAATTATTATTTTAAATATGAATCCAATTATGAAATAATCCAAATAAAT
Protein sequenceShow/hide protein sequence
MSIVSVSYSSASLRSTVQSRRHGSNLNLSHLLHKANSLPFPRTIPKNRVTHITTYRDMAVYGGGGGGGGLGSPLPQPPPPPPLTPWPLWVAGAVLSAILSIWKTTKYWGP
FLMLKQRVEKVVHVAEDVVDMVETAAKEVDKVSEEIVDHLPKDSILQKTAVLVENTAETVAKDANLAAEIIGKVEKFDDGLSSLIKKKGGSKEGDAKPKP