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CmaCh05G006140 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh05G006140
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionendo-1,4-beta-xylanase B-like
Genome locationCma_Chr05:3080339..3082844
RNA-Seq ExpressionCmaCh05G006140
SyntenyCmaCh05G006140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5695550.1 hypothetical protein BaRGS_033972 [Batillaria attramentaria]3.6e-1750.36Show/hide
Query:  DLTRQAIT-SVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGD
        DLT   IT +VDLT   IT+  DLT   IT+  DLT   IT+  DLT   IT+  DLT   IT+  DLT   IT+  DLT   IT+  DLT   IT+T D
Subjt:  DLTRQAIT-SVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGD

Query:  LTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTHS
        LT   IT+T DLT   IT+T DLT   IT+T DLT S
Subjt:  LTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTHS

OWF53202.1 hypothetical protein KP79_PYT11525 [Mizuhopecten yessoensis]6.0e-2041.62Show/hide
Query:  TRQAITVVLTRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQAITSV-DLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQ
        T + IT  L+R + TV  DL++ + T+ SDL+R + TV  DL+R + TS  DL+R + TV  DL+R +  V  DL+R + T+  DL+R + TV  DL+R 
Subjt:  TRQAITVVLTRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQAITSV-DLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQ

Query:  AITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTHSQSSPGNYSRPNLTRQAITVV
        + TV  DL+R +  V  DL+R + T+  DL+R + TVT DL+R + TVT DL+R +  VT DL+R +  VT DL    S   N    +L+R + TV+
Subjt:  AITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTHSQSSPGNYSRPNLTRQAITVV

OWF54871.1 hypothetical protein KP79_PYT12492 [Mizuhopecten yessoensis]4.4e-1529.37Show/hide
Query:  DLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGD
        D+T   + + GD+T   + + GD+T   + + GD+T   + + GD+T   + + GD+T   + + GD+T   + + GD+T   + + GD+T   + + GD
Subjt:  DLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGD

Query:  LTRQAITVTGDLTRQAITVTGDLTHS
        +T   + + GD+T   + + GD+THS
Subjt:  LTRQAITVTGDLTRQAITVTGDLTHS

RUS90523.1 hypothetical protein EGW08_001700, partial [Elysia chlorotica]2.9e-1437.65Show/hide
Query:  VRSDLTRQAITVRSDLTRQAITVRSDLTRQ-AITSVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITV
        V+ DLT     V+ DLT     V+ DLT    I   DLT     + GDLT     + GDLT     + GDLT     + GDLT     + GDLT     +
Subjt:  VRSDLTRQAITVRSDLTRQAITVRSDLTRQ-AITSVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITV

Query:  RGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTHS
         GDLT     + GDLT     + GDLT     + GDLT     + GDLT     + GDLT S
Subjt:  RGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTHS

XP_014040186.1 PREDICTED: endo-1,4-beta-xylanase B-like [Salmo salar]1.2e-1527.89Show/hide
Query:  TRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQA-----ITSVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTR----QAITVRGDLTRQA
        +R+++ +  D +RQ+  +  D +R+++ +  D +RQ+     +   D +R+++ + GD +R+++ + GD  R+++ + GD +R    Q++ V GD++R++
Subjt:  TRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQA-----ITSVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTR----QAITVRGDLTRQA

Query:  ITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTR----QAITVTGDLTRQAITVTGDLTRQAITVTGD-LTHSQSSPGNYSR
        + + GD +R+++ + GD +R+++ + GD  R+++ + GD +R    Q++ V GD++R+++ + GD +R+++ + GD  T S   PG+ SR
Subjt:  ITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTR----QAITVTGDLTRQAITVTGDLTRQAITVTGD-LTHSQSSPGNYSR

TrEMBL top hitse value%identityAlignment
A0A1S3QJL1 endo-1,4-beta-xylanase B-like5.6e-1627.89Show/hide
Query:  TRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQA-----ITSVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTR----QAITVRGDLTRQA
        +R+++ +  D +RQ+  +  D +R+++ +  D +RQ+     +   D +R+++ + GD +R+++ + GD  R+++ + GD +R    Q++ V GD++R++
Subjt:  TRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQA-----ITSVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTR----QAITVRGDLTRQA

Query:  ITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTR----QAITVTGDLTRQAITVTGDLTRQAITVTGD-LTHSQSSPGNYSR
        + + GD +R+++ + GD +R+++ + GD  R+++ + GD +R    Q++ V GD++R+++ + GD +R+++ + GD  T S   PG+ SR
Subjt:  ITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTR----QAITVTGDLTRQAITVTGDLTRQAITVTGD-LTHSQSSPGNYSR

A0A210QX10 Uncharacterized protein2.9e-2041.62Show/hide
Query:  TRQAITVVLTRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQAITSV-DLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQ
        T + IT  L+R + TV  DL++ + T+ SDL+R + TV  DL+R + TS  DL+R + TV  DL+R +  V  DL+R + T+  DL+R + TV  DL+R 
Subjt:  TRQAITVVLTRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQAITSV-DLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQ

Query:  AITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTHSQSSPGNYSRPNLTRQAITVV
        + TV  DL+R +  V  DL+R + T+  DL+R + TVT DL+R + TVT DL+R +  VT DL+R +  VT DL    S   N    +L+R + TV+
Subjt:  AITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTHSQSSPGNYSRPNLTRQAITVV

A0A210R1V5 Uncharacterized protein2.1e-1529.37Show/hide
Query:  DLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGD
        D+T   + + GD+T   + + GD+T   + + GD+T   + + GD+T   + + GD+T   + + GD+T   + + GD+T   + + GD+T   + + GD
Subjt:  DLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGD

Query:  LTRQAITVTGDLTRQAITVTGDLTHS
        +T   + + GD+T   + + GD+THS
Subjt:  LTRQAITVTGDLTRQAITVTGDLTHS

A0A3S1BKQ5 Uncharacterized protein (Fragment)1.4e-1437.65Show/hide
Query:  VRSDLTRQAITVRSDLTRQAITVRSDLTRQ-AITSVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITV
        V+ DLT     V+ DLT     V+ DLT    I   DLT     + GDLT     + GDLT     + GDLT     + GDLT     + GDLT     +
Subjt:  VRSDLTRQAITVRSDLTRQAITVRSDLTRQ-AITSVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITV

Query:  RGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTHS
         GDLT     + GDLT     + GDLT     + GDLT     + GDLT     + GDLT S
Subjt:  RGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTHS

A0A6Q2XBC3 Uncharacterized protein3.6e-1535.78Show/hide
Query:  RQTITVDLTRQAITVV--LTRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQAIT-SVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQA
        R T++   TR+ +TV    TR+ +TV    TRQ +TV    TRQ +TV     R+ +T S   TR+ +TV    TR+ +TV    TR+ +TV    TR+ 
Subjt:  RQTITVDLTRQAITVV--LTRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQAIT-SVDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQA

Query:  ITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDL--THSQSSPGNYSRPN
        +TV    TR+ +TV    TR+ +TV    TR     R   TR+ +TV+   TR+ +TV+   TR+ +TV+   TR+ +TV        SQS PG   R +
Subjt:  ITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTGDL--THSQSSPGNYSRPN

Query:  LTRQ
           Q
Subjt:  LTRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGACAGATTTAGGAAACAGCCTATGCATAGTTGCGATGATGTTAACCACCAATGGTTAGTCTTGTTTGTGAAGGCTTTTCAATTTGGAAAACAAGAACCT
TTTGAGACTGTCGATTTGACTCGTCAGACAATTACAGTCGATCTGACTCGCCAAGCAATTACAGTCGTCCTGACTCGCCAAGCAATTACAGTCAGAAGTGACTTA
ACTCGCCAGGCAATTACAGTCAGAAGTGACTTAACTCGCCAGGCAATTACAGTCAGAAGTGACTTAACTCGCCAGGCAATTACATCAGTCGATCTGACTCGCCAG
GCAATTACAGTCAGAGGTGACTTAACTCGCCAGGCAATTACAGTCAGAGGTGACTTAACTCGCCAGGCAATTACAGTCAGAGGTGACTTAACTCGCCAGGCAATT
ACAGTCAGAGGTGACTTAACTCGCCAGGCAATTACAGTCAGAGGTGACTTAACTCGCCAGGCAATTACAGTCAGAGGTGACTTAACTCGCCAGGCAATTACAGTC
AGAGGTGACTTAACTCGCCAGGCAATTACAGTCACAGGTGACTTAACTCGCCAGGCAATTACAGTCACAGGTGACTTAACTCGCCAGGCAATTACAGTCACAGGT
GACTTAACTCGCCAGGCAATTACAGTCACAGGTGACTTAACTCACAGTCAGTCCTCGCCAGGCAATTACAGTCGTCCTAACTTAACTCGCCAGGCAATTACAGTC
GTCCTAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGACAGATTTAGGAAACAGCCTATGCATAGTTGCGATGATGTTAACCACCAATGGTTAGTCTTGTTTGTGAAGGCTTTTCAATTTGGAAAACAAGAACCT
TTTGAGACTGTCGATTTGACTCGTCAGACAATTACAGTCGATCTGACTCGCCAAGCAATTACAGTCGTCCTGACTCGCCAAGCAATTACAGTCAGAAGTGACTTA
ACTCGCCAGGCAATTACAGTCAGAAGTGACTTAACTCGCCAGGCAATTACAGTCAGAAGTGACTTAACTCGCCAGGCAATTACATCAGTCGATCTGACTCGCCAG
GCAATTACAGTCAGAGGTGACTTAACTCGCCAGGCAATTACAGTCAGAGGTGACTTAACTCGCCAGGCAATTACAGTCAGAGGTGACTTAACTCGCCAGGCAATT
ACAGTCAGAGGTGACTTAACTCGCCAGGCAATTACAGTCAGAGGTGACTTAACTCGCCAGGCAATTACAGTCAGAGGTGACTTAACTCGCCAGGCAATTACAGTC
AGAGGTGACTTAACTCGCCAGGCAATTACAGTCACAGGTGACTTAACTCGCCAGGCAATTACAGTCACAGGTGACTTAACTCGCCAGGCAATTACAGTCACAGGT
GACTTAACTCGCCAGGCAATTACAGTCACAGGTGACTTAACTCACAGTCAGTCCTCGCCAGGCAATTACAGTCGTCCTAACTTAACTCGCCAGGCAATTACAGTC
GTCCTAACTTAA
Protein sequenceShow/hide protein sequence
MFDRFRKQPMHSCDDVNHQWLVLFVKAFQFGKQEPFETVDLTRQTITVDLTRQAITVVLTRQAITVRSDLTRQAITVRSDLTRQAITVRSDLTRQAITSVDLTRQ
AITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVRGDLTRQAITVTGDLTRQAITVTGDLTRQAITVTG
DLTRQAITVTGDLTHSQSSPGNYSRPNLTRQAITVVLT