CuGenDBv2

Gene ID	CmaCh05G006560
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Genome location	Cma_Chr05:3353968..3354788
RNA-Seq Expression	CmaCh05G006560
Synteny	CmaCh05G006560
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6598839.1 Pleiotropic drug resistance protein 1, partial [Cucurbita argyrosperma subsp. sororia]

3.8e-69

97.79

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Query:  MAMS-TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMS TTCCLNNLNPPPRLLPKSTTPTTNQLLPRN NGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMS-TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM
        PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFS+
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM

XP_022929729.1 uncharacterized protein LOC111436227 [Cucurbita moschata]

2.2e-69

97.79

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Query:  MAMS-TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMS TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVA+ALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMS-TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM
        PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFS+
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM

XP_022997474.1 uncharacterized protein LOC111492380 [Cucurbita maxima]

1.4e-71

100

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Query:  MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLP
        MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLP
Subjt:  MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLP

Query:  RPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM
        RPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM
Subjt:  RPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM

XP_023521869.1 uncharacterized protein LOC111785720 [Cucurbita pepo subsp. pepo]

1.9e-68

97.06

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Query:  MAMS-TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMS TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVA+ALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMS-TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM
        PRPAARRRWEPAALPRTAPQLRTIH S LSTRCFSM
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM

XP_023547232.1 uncharacterized protein LOC111806106 [Cucurbita pepo subsp. pepo]

1.7e-69

98.53

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Query:  MAMS-TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMS TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMS-TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM
        PRPAARRRWEPAALPRTAPQLRTIH SSLSTRCFSM
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLU6 Uncharacterized protein

1.6e-52

78.1

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Query:  MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLP
        M M+TTCCLNNLNPPPRL   ST  T   LLP NGNGE W+KRCVLG  GV  AL M GES GVEM ++NFVDSRKWSEERMCPQWRLNSLETIVPENLP
Subjt:  MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLP

Query:  RPAARRRWEPAALPRT--APQLRTIHTSSLSTRCFSM
        RPAARRRW+PAALP+T  APQLRT +T+SLSTRCFSM
Subjt:  RPAARRRWEPAALPRT--APQLRTIHTSSLSTRCFSM

A0A1S3BBI5 uncharacterized protein LOC103488267

2.2e-51

78.57

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Query:  MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGER-WQKRCVLGVVGVAMALQMVGESGGVEMGDVN-FVD-SRKWSEERMCPQWRLNSLETIVPE
        MAM+TTCC+NNLNPPPRL   ST  T N LLP NG+G++ W+KRCVLGV GV  AL M GESGGVEMG+VN FVD SRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGER-WQKRCVLGVVGVAMALQMVGESGGVEMGDVN-FVD-SRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWEPAALPRT--APQLRTIHTSSLSTRCFSM
        NLPRPAARRRW+PAALP T  APQLRT +T+SLSTRCFSM
Subjt:  NLPRPAARRRWEPAALPRT--APQLRTIHTSSLSTRCFSM

A0A5A7VGF0 Uncharacterized protein

8.5e-51

77.86

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Query:  MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGER-WQKRCVLGVVGVAMALQMVGESGGVEMGDVN-FVD-SRKWSEERMCPQWRLNSLETIVPE
        MAM+TTCC+NNLNPPPRL   ST  T N LLP NG+G++ W+KRCVLGV GV  AL M GESGGVEMG+VN FVD SRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGER-WQKRCVLGVVGVAMALQMVGESGGVEMGDVN-FVD-SRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWEPAALPRT--APQLRTIHTSSLSTRCFSM
        NLPRPAARRRW+PAALP T  APQLRT + +SLSTRCFSM
Subjt:  NLPRPAARRRWEPAALPRT--APQLRTIHTSSLSTRCFSM

A0A6J1EPL8 uncharacterized protein LOC111436227

1.1e-69

97.79

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Query:  MAMS-TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
        MAMS TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVA+ALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL
Subjt:  MAMS-TTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENL

Query:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM
        PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFS+
Subjt:  PRPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM

A0A6J1KBE7 uncharacterized protein LOC111492380

6.7e-72

100

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Query:  MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLP
        MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLP
Subjt:  MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLP

Query:  RPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM
        RPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM
Subjt:  RPAARRRWEPAALPRTAPQLRTIHTSSLSTRCFSM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G25625.1 unknown protein

1.7e-11

35.26

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Query:  MAMSTTCCLN--NLNPPPRLLPKSTTPTTNQL-LPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDS-----------------RKWSEE
        MA   +CCLN   L+        S   TT+++   R  N    +K     V+GVA  + +    GG+++ DV  V++                 R+WS++
Subjt:  MAMSTTCCLN--NLNPPPRLLPKSTTPTTNQL-LPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDS-----------------RKWSEE

Query:  RMCPQWRLNSLETIVPENLPRPAARRRWEPAALPR-TAPQLRTIHTSSLSTRCFSM
        R CP W  NSLETIVPENLPRP+A RR E A L +  AP +  + T      CFS+
Subjt:  RMCPQWRLNSLETIVPENLPRPAARRRWEPAALPR-TAPQLRTIHTSSLSTRCFSM

AT2G25625.2 unknown protein

1.6e-12

35.48

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Query:  MAMSTTCCLN--NLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDS-----------------RKWSEER
        MA   +CCLN   L+        S   TT+++  R  N    +K     V+GVA  + +    GG+++ DV  V++                 R+WS++R
Subjt:  MAMSTTCCLN--NLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDS-----------------RKWSEER

Query:  MCPQWRLNSLETIVPENLPRPAARRRWEPAALPR-TAPQLRTIHTSSLSTRCFSM
         CP W  NSLETIVPENLPRP+A RR E A L +  AP +  + T      CFS+
Subjt:  MCPQWRLNSLETIVPENLPRPAARRRWEPAALPR-TAPQLRTIHTSSLSTRCFSM

Sequences

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CDS sequence

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ATGGCTATGTCCACCACCTGTTGCCTGAACAACCTCAATCCGCCGCCGCGGCTGCTCCCAAAGTCCACCACACCCACCACCAATCAACTCCTTCCACGGAATGGA
AATGGAGAACGGTGGCAAAAGCGGTGCGTTTTGGGGGTGGTCGGAGTGGCAATGGCTCTGCAAATGGTCGGAGAAAGTGGTGGCGTAGAAATGGGAGATGTCAAT
TTTGTTGATTCCAGAAAATGGAGCGAAGAAAGAATGTGCCCTCAGTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCAAGGCCAGCCGCCCGC
CGGAGATGGGAGCCCGCCGCCCTTCCTCGCACAGCGCCTCAACTCCGAACCATACATACATCTTCCCTCTCTACTCGCTGCTTCTCTATGTAA

mRNA sequence

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CCCTTGCCGTCGTTCTCATTTCTCAACTACCGTGAGCTGACCAACAAGCTCCCACGCCACCTCCTCATCCTTCTCCTTCTTTTTAACTTCTTCATTTCCCATCTC
CTTCTCTCCCAAATTCCACAGTTCCATAAACACTCCAACAGACAAATTCATCAAAAAAAAAATGGCTATGTCCACCACCTGTTGCCTGAACAACCTCAATCCGCC
GCCGCGGCTGCTCCCAAAGTCCACCACACCCACCACCAATCAACTCCTTCCACGGAATGGAAATGGAGAACGGTGGCAAAAGCGGTGCGTTTTGGGGGTGGTCGG
AGTGGCAATGGCTCTGCAAATGGTCGGAGAAAGTGGTGGCGTAGAAATGGGAGATGTCAATTTTGTTGATTCCAGAAAATGGAGCGAAGAAAGAATGTGCCCTCA
GTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCAAGGCCAGCCGCCCGCCGGAGATGGGAGCCCGCCGCCCTTCCTCGCACAGCGCCTCAACT
CCGAACCATACATACATCTTCCCTCTCTACTCGCTGCTTCTCTATGTAATTTCCAAATCCCTAAATATCAATTTACCAATTCTTCAATACCATTTTACAATATTA
CAATATTACCATTTCAATGTAATTTAATATTCTTAATTTTTCTAATAATCTTATAAATATATTTAGATTATGAC

Protein sequence

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MAMSTTCCLNNLNPPPRLLPKSTTPTTNQLLPRNGNGERWQKRCVLGVVGVAMALQMVGESGGVEMGDVNFVDSRKWSEERMCPQWRLNSLETIVPENLPRPAAR
RRWEPAALPRTAPQLRTIHTSSLSTRCFSM

CmaCh05G006560 (gene) of Cucurbita maxima (Rimu) v1.1 genome