; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh05G007770 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh05G007770
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPhotosystem I reaction center subunit IV
Genome locationCma_Chr05:4628925..4630106
RNA-Seq ExpressionCmaCh05G007770
SyntenyCmaCh05G007770
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009538 - photosystem I reaction center (cellular component)
InterPro domainsIPR003375 - Photosystem I PsaE, reaction centre subunit IV
IPR008990 - Electron transport accessory-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598956.1 Photosystem I reaction center subunit IV, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5791.43Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS
        MAASNLSCIASGVLIPSPPTISSSSS R SSFAIFPN+SRSSRFVIRA ADE      AAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKD+GS
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS

Query:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        VVTVDQDPNTRYPVVVRFNKVNYA+VSTNNYALDEIKEVA
Subjt:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

XP_008441802.1 PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo]9.1e-5084.14Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNH----SRSSRFVIRAAA-DEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWY
        MAASNLSCIASGV+IPS  TI SSSSSRLSS A FP +    SRSSR VIRAAA DEAAPP PAA   AA  EEPKPKP PIGPKRGAKVKILRKESYWY
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNH----SRSSRFVIRAAA-DEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWY

Query:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        KDVGSVVTVDQDPNTRYPVVVRFNKVNYA+VSTNNYALDEI+EVA
Subjt:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

XP_022929705.1 photosystem I reaction center subunit IV, chloroplastic-like [Cucurbita moschata]1.9e-6397.14Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS
        MAASNLSCIASGVLIPSPPTISSSSS RLSSFAIFPN+SRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKES+WYKDVGS
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS

Query:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        VVTVDQDPNTRYPVVVRFNKVNYA+VSTNNYALDEIKEVA
Subjt:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

XP_022997580.1 photosystem I reaction center subunit IV, chloroplastic-like [Cucurbita maxima]5.3e-66100Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS
        MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS

Query:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
Subjt:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

XP_023546723.1 photosystem I reaction center subunit IV, chloroplastic-like [Cucurbita pepo subsp. pepo]1.9e-6092.86Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS
        MAASNLSCIASGVLIPSPPTISSSSS RLSSFAIFPN+SRSSRFVIRA  DEA+PPTPAAP TAAATEEPKPKPPPIGPKRGAKVKILRKESYW+KDVG 
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS

Query:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        VVTVDQDPNTRYPVVVRF+KVNYA+VSTNNYALDEIKEVA
Subjt:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

TrEMBL top hitse value%identityAlignment
A0A0A0LJQ1 Uncharacterized protein3.7e-4983.33Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNH----SRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGV+IPS  TI SSSSSRLSS A FP +    SRSSR VIR A+DEAAPP  A   TAA TEEPKPKP PIGPKRGAKVKILRKESYWYK
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNH----SRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYA+VSTNNYALDEI+EVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

A0A1S3B3T3 photosystem I reaction center subunit IV, chloroplastic-like4.4e-5084.14Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNH----SRSSRFVIRAAA-DEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWY
        MAASNLSCIASGV+IPS  TI SSSSSRLSS A FP +    SRSSR VIRAAA DEAAPP PAA   AA  EEPKPKP PIGPKRGAKVKILRKESYWY
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNH----SRSSRFVIRAAA-DEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWY

Query:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        KDVGSVVTVDQDPNTRYPVVVRFNKVNYA+VSTNNYALDEI+EVA
Subjt:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

A0A6J1EV28 photosystem I reaction center subunit IV, chloroplastic-like9.1e-6497.14Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS
        MAASNLSCIASGVLIPSPPTISSSSS RLSSFAIFPN+SRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKES+WYKDVGS
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS

Query:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        VVTVDQDPNTRYPVVVRFNKVNYA+VSTNNYALDEIKEVA
Subjt:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

A0A6J1HLT8 photosystem I reaction center subunit IV, chloroplastic-like1.6e-4780.69Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNH----SRSSRFVIRAAADEAAPPTPAAPATA-AATEEPKPKPPPIGPKRGAKVKILRKESYWY
        MAASNLSCIASGV+IPS PTI  SSSSR SS A FP +    SRS R V+RAAADEAA P PAA ATA A  E PKPKP PIGPKRG KVKILR+ESYWY
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNH----SRSSRFVIRAAADEAAPPTPAAPATA-AATEEPKPKPPPIGPKRGAKVKILRKESYWY

Query:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        KDVGSVVTVDQDPNTRYPVVVRFNKVNYA+VSTNNYALDEI+EVA
Subjt:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

A0A6J1KA35 photosystem I reaction center subunit IV, chloroplastic-like2.6e-66100Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS
        MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGS

Query:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
Subjt:  VVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

SwissProt top hitse value%identityAlignment
P12354 Photosystem I reaction center subunit IV, chloroplastic2.3e-3264.8Show/hide
Query:  TISSSSSSRLSSFAIFPNHS----RSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV
        +I+SS + RL    + PN +    RS+R V+RAA + AA P  A+P   A   +   KPPPIGPKRG+KV+I+RKESYWYK VGSVV VDQDP TRYPVV
Subjt:  TISSSSSSRLSSFAIFPNHS----RSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVV

Query:  VRFNKVNYANVSTNNYALDEIKEVA
        VRFNKVNYANVSTNNYALDEI+EVA
Subjt:  VRFNKVNYANVSTNNYALDEIKEVA

Q41228 Photosystem I reaction center subunit IV A, chloroplastic2.8e-3359.29Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSS-FAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVG
        MA+ N++  AS  L+ +P   S++++SR +  F    N+  ++  ++  AA+EAAPP  AA A  A       KPPPIGPKRG KV+ILRKESYWYK  G
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSS-FAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVG

Query:  SVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEV
        SVV  DQDPNTRYPVVVRFNKVNYANVSTNNYALDEI+EV
Subjt:  SVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEV

Q41229 Photosystem I reaction center subunit IV B, chloroplastic7.2e-3459.44Show/hide
Query:  MAASNLSCIASGVLIPSPPTISSSSSSRLSS--FAIFPNHSRSS--RFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYK
        MA+S+++  ASG ++ +P   +S+++ R S   F+   N++ ++  R V+R AA+EAAPP   A A   A      KPPPIGPKRG KV++LRKESYWYK
Subjt:  MAASNLSCIASGVLIPSPPTISSSSSSRLSS--FAIFPNHSRSS--RFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEV
         VGSVV VDQDPNTRYPVVVRFNKVNYANVSTNNYALDE++EV
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEV

Q9S714 Photosystem I reaction center subunit IV B, chloroplastic8.3e-3056.25Show/hide
Query:  LSCIASGVLIPS--PPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPA--------APATAAATEEPKPKPPPIGPKRGAKVKILRKESYWY
        ++  A+G ++ +  P  I   SS   +  +  P  S  SR V+RAA D   PP  A        A A  A     K KPPPIGPKRG+KVKILRKESYWY
Subjt:  LSCIASGVLIPS--PPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPA--------APATAAATEEPKPKPPPIGPKRGAKVKILRKESYWY

Query:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEV
        K+VGSVV VDQDP TRYPVVVRF KVNYAN+STNNYALDE++EV
Subjt:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEV

Q9S831 Photosystem I reaction center subunit IV A, chloroplastic1.0e-3260.74Show/hide
Query:  LIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEA--------APPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGSVVTVD
        ++P+  T  + +SS  SS +  P  +  SR V+RAA D A        +P   AAP  A AT   KPKPPPIGPKRG+KVKILR+ESYW+K+VGSVV VD
Subjt:  LIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEA--------APPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGSVVTVD

Query:  QDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        QDP TRYPVVVRF KVNYAN+STNNYALDE++EVA
Subjt:  QDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA

Arabidopsis top hitse value%identityAlignment
AT2G20260.1 photosystem I subunit E-25.9e-3156.25Show/hide
Query:  LSCIASGVLIPS--PPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPA--------APATAAATEEPKPKPPPIGPKRGAKVKILRKESYWY
        ++  A+G ++ +  P  I   SS   +  +  P  S  SR V+RAA D   PP  A        A A  A     K KPPPIGPKRG+KVKILRKESYWY
Subjt:  LSCIASGVLIPS--PPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPA--------APATAAATEEPKPKPPPIGPKRGAKVKILRKESYWY

Query:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEV
        K+VGSVV VDQDP TRYPVVVRF KVNYAN+STNNYALDE++EV
Subjt:  KDVGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEV

AT4G28750.1 Photosystem I reaction centre subunit IV / PsaE protein7.4e-3460.74Show/hide
Query:  LIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEA--------APPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGSVVTVD
        ++P+  T  + +SS  SS +  P  +  SR V+RAA D A        +P   AAP  A AT   KPKPPPIGPKRG+KVKILR+ESYW+K+VGSVV VD
Subjt:  LIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEA--------APPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGSVVTVD

Query:  QDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA
        QDP TRYPVVVRF KVNYAN+STNNYALDE++EVA
Subjt:  QDPNTRYPVVVRFNKVNYANVSTNNYALDEIKEVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCTAACCTTTCATGCATAGCTTCTGGAGTGCTCATTCCATCTCCACCCACCATATCATCATCCTCCTCTTCTAGGTTATCTTCTTTCGCCATCTTCCCTAA
CCATTCTAGATCATCTAGATTCGTTATCCGTGCCGCCGCCGACGAAGCTGCTCCCCCAACCCCTGCTGCTCCCGCCACCGCCGCGGCCACTGAAGAACCCAAGCCTAAGC
CTCCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTAAAGATTCTAAGGAAAGAATCCTACTGGTACAAAGATGTTGGATCGGTTGTAACAGTTGACCAGGACCCGAATACT
CGATATCCCGTTGTAGTTAGATTTAACAAAGTAAATTATGCAAATGTATCAACAAACAACTATGCACTTGATGAGATTAAGGAAGTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
CTCCTTCAATCTGTGATGTTATCATTATTCAAAGCATTGATACTCAAACCCCAAAGCTGCTTTGAGCCAGACAAAGGCCATGGCTGCCTCTAACCTTTCATGCATAGCTT
CTGGAGTGCTCATTCCATCTCCACCCACCATATCATCATCCTCCTCTTCTAGGTTATCTTCTTTCGCCATCTTCCCTAACCATTCTAGATCATCTAGATTCGTTATCCGT
GCCGCCGCCGACGAAGCTGCTCCCCCAACCCCTGCTGCTCCCGCCACCGCCGCGGCCACTGAAGAACCCAAGCCTAAGCCTCCCCCTATTGGTCCCAAAAGAGGTGCCAA
GGTAAAGATTCTAAGGAAAGAATCCTACTGGTACAAAGATGTTGGATCGGTTGTAACAGTTGACCAGGACCCGAATACTCGATATCCCGTTGTAGTTAGATTTAACAAAG
TAAATTATGCAAATGTATCAACAAACAACTATGCACTTGATGAGATTAAGGAAGTTGCTTAAGCTTTGAATGTGCTTGTGTATTTTTTGAGTTAAATGTTTGTATAATAC
TTTCAATTTCAATCTATTTCTCCTCTCCCCATGAGTGTGTTTCCACCCATAATTTCTCATCCTTAGATTTTTTTATGCTTAGTTAGGGAGTTGAAGTGTGTATGGATTGG
TTAAAGAAATCTTTTAGACCAAAATTTGGGGTTAGTTAAGCCGGTGACCAGATCAATCCAAATAAAGTTATCCGACCCAACCCTCTATTTTTAGGTTGGATTGAGTTGAG
TTGTCAGAGTTTTTTTTCAATTATTTAAAGAAAAATCTACATATCTAC
Protein sequenceShow/hide protein sequence
MAASNLSCIASGVLIPSPPTISSSSSSRLSSFAIFPNHSRSSRFVIRAAADEAAPPTPAAPATAAATEEPKPKPPPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNT
RYPVVVRFNKVNYANVSTNNYALDEIKEVA