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CmaCh05G008100 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh05G008100
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr05:5333147..5333464
RNA-Seq ExpressionCmaCh05G008100
SyntenyCmaCh05G008100
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RWR86369.1 hypothetical protein CKAN_01526400 [Cinnamomum micranthum f. kanehirae]3.9e-4188.66Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        MDSSMCSSAPDPEMWIIQGTLAWRT P    EDRW DSGEIQCRSNFLFTRGIRAVRGGPP LLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
RWR98273.1 hypothetical protein CKAN_02780200 [Cinnamomum micranthum f. kanehirae]2.5e-4087.63Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        MDSSMCSSAPDP MWIIQGTLAWRT P    EDRW DSGEIQCRSNFLFTRGIRAVRGGPP LLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
RYR42392.1 hypothetical protein Ahy_A08g038864 [Arachis hypogaea]1.1e-4091.49Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK
        MDSSMCSSAPDPEMWIIQGTLAWRTSP    EDRW DSGEIQCRSNFLFTRGI AVRGGPPRLLSSRE IHPLSVYGQLSLEHRFRFGLNGK K
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK
THU42410.1 hypothetical protein C4D60_Mb00t17760 [Musa balbisiana]4.6e-4289.69Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        MDSSMCSSAPDPEMWIIQGTLAWRT P    EDRW DSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
THU42596.1 hypothetical protein C4D60_Mb00t15430 [Musa balbisiana]4.6e-4289.69Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        MDSSMCSSAPDPEMWIIQGTLAWRT P    EDRW DSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
TrEMBL top hitse value%identityAlignment
A0A3S3RAS8 Uncharacterized protein ycf681.2e-4087.63Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        MDSSMCSSAPDP MWIIQGTLAWRT P    EDRW DSGEIQCRSNFLFTRGIRAVRGGPP LLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
A0A443P6I3 Uncharacterized protein ycf681.9e-4188.66Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        MDSSMCSSAPDPEMWIIQGTLAWRT P    EDRW DSGEIQCRSNFLFTRGIRAVRGGPP LLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
A0A445BUR7 Uncharacterized protein ycf685.5e-4191.49Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK
        MDSSMCSSAPDPEMWIIQGTLAWRTSP    EDRW DSGEIQCRSNFLFTRGI AVRGGPPRLLSSRE IHPLSVYGQLSLEHRFRFGLNGK K
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIK
A0A4S8I423 Uncharacterized protein ycf682.2e-4289.69Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        MDSSMCSSAPDPEMWIIQGTLAWRT P    EDRW DSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
A0A4V6T3W7 Uncharacterized protein ycf682.2e-4289.69Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        MDSSMCSSAPDPEMWIIQGTLAWRT P    EDRW DSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGK++  T
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSP----EDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
SwissProt top hitse value%identityAlignment
P03938 Uncharacterized protein ycf685.2e-1261.9Show/hide
Query:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        G IQ RS+    F    G     GGPP LLSSRESIHPLSVYG+LSLEHR RF LNGK++  T
Subjt:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
Q49KT9 Uncharacterized protein ycf686.3e-1066Show/hide
Query:  MDSSMCSSAPDPEMWIIQGTLAWRTSPEDRWVDS--------GEIQCRSN
        MDSSMCSSAPDPEMWIIQGTLAWRTSP     ++        G IQ RSN
Subjt:  MDSSMCSSAPDPEMWIIQGTLAWRTSPEDRWVDS--------GEIQCRSN
Q6ENQ5 Uncharacterized protein ycf688.0e-1363.49Show/hide
Query:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        G IQ RS+    F    G     GGPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++  T
Subjt:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
Q6L3C9 Uncharacterized protein ycf688.0e-1363.49Show/hide
Query:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
        G IQ RS+    F    G     GGPPRLLSSRESIHPLSVYG+LSLEHR RF LNGK++  T
Subjt:  GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGAGGATAGATGGGTCGATTCAGGTGAGAT
CCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGAC
AGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGAGGATAGATGGGTCGATTCAGGTGAGAT
CCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGAC
AGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAA
Protein sequenceShow/hide protein sequence
MDSSMCSSAPDPEMWIIQGTLAWRTSPEDRWVDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKIKRST