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CmaCh05G010800 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh05G010800
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionzinc finger matrin-type protein 2
Genome locationCma_Chr05:8535238..8537210
RNA-Seq ExpressionCmaCh05G010800
SyntenyCmaCh05G010800
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586229.1 Zinc finger matrin-type protein 2, partial [Cucurbita argyrosperma subsp. sororia]2.1e-0766.1Show/hide
Query:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
        MAH SN  AGVDNT RRKFD EE LER R+ EKQ    VKSK      QRKPLKHRDY+
Subjt:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
XP_008453709.1 PREDICTED: zinc finger matrin-type protein 2 [Cucumis melo]9.6e-0867.8Show/hide
Query:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
        MAH SN  AGVDNT RRKFD EE LER RE EKQ    VKSK      QRKPLKHRDY+
Subjt:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
XP_011648855.1 zinc finger matrin-type protein 2 [Cucumis sativus]2.1e-0766.1Show/hide
Query:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
        MAH SN  AGVDNT RRKFD EE LER R+ EKQ    VKSK      QRKPLKHRDY+
Subjt:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
XP_022156440.1 zinc finger matrin-type protein 2 [Momordica charantia]2.5e-0867.8Show/hide
Query:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
        MAH SNP AGVDNT RRKFD EE LER R+ EKQ    VKSK      QRKPLKHRDY+
Subjt:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
XP_022965943.1 zinc finger matrin-type protein 2 [Cucurbita maxima]2.1e-0766.1Show/hide
Query:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
        MAH SN  AGVDNT RRKFD EE LER R+ EKQ    VKSK      QRKPLKHRDY+
Subjt:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
TrEMBL top hitse value%identityAlignment
A0A0A0LM02 U1-type domain-containing protein1.0e-0766.1Show/hide
Query:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
        MAH SN  AGVDNT RRKFD EE LER R+ EKQ    VKSK      QRKPLKHRDY+
Subjt:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
A0A1S3BWZ9 zinc finger matrin-type protein 24.7e-0867.8Show/hide
Query:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
        MAH SN  AGVDNT RRKFD EE LER RE EKQ    VKSK      QRKPLKHRDY+
Subjt:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
A0A6J1DQA3 zinc finger matrin-type protein 21.2e-0867.8Show/hide
Query:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
        MAH SNP AGVDNT RRKFD EE LER R+ EKQ    VKSK      QRKPLKHRDY+
Subjt:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
A0A6J1FDL7 zinc finger matrin-type protein 21.0e-0766.1Show/hide
Query:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
        MAH SN  AGVDNT RRKFD EE LER R+ EKQ    VKSK      QRKPLKHRDY+
Subjt:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
A0A6J1HQF6 zinc finger matrin-type protein 21.0e-0766.1Show/hide
Query:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
        MAH SN  AGVDNT RRKFD EE LER R+ EKQ    VKSK      QRKPLKHRDY+
Subjt:  MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQ----VKSK-----SQRKPLKHRDYD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05760.1 C2H2 and C2HC zinc fingers superfamily protein8.7e-0752.73Show/hide
Query:  ASNPVAGVDNTIRRKFDPEECLERPREHEKQVKSKS---------QRKPLKHRDY
        +SN   GVDNT R+KFD EE  ER RE EK+   +S         QR PLKHRDY
Subjt:  ASNPVAGVDNTIRRKFDPEECLERPREHEKQVKSKS---------QRKPLKHRDY
AT3G05760.2 C2H2 and C2HC zinc fingers superfamily protein8.7e-0752.73Show/hide
Query:  ASNPVAGVDNTIRRKFDPEECLERPREHEKQVKSKS---------QRKPLKHRDY
        +SN   GVDNT R+KFD EE  ER RE EK+   +S         QR PLKHRDY
Subjt:  ASNPVAGVDNTIRRKFDPEECLERPREHEKQVKSKS---------QRKPLKHRDY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCATGCCAGCAACCCTGTAGCTGGAGTTGATAACACCATCAGAAGAAAATTTGATCCAGAGGAGTGTTTGGAACGACCTCGTGAGCATGAAAAACAGGTT
AAGTCGAAATCGCAGAGAAAACCATTGAAGCATAGAGATTACGATTGGGAAAAACCCAGGTTAGTTATACCATTCTCTCACTGTTCCTTCAAACATTTTCTTGAA
TCAGTGTGTATTTTGGCCACTTTGTTGGAGAATCTGTATTTGCACCGTTCTTTTGTGTTTATGTGGTAG
mRNA sequenceShow/hide mRNA sequence
GCGGTCAAGTTTTTTTTTCGGCGGCGATGGCTCATGCCAGCAACCCTGTAGCTGGAGTTGATAACACCATCAGAAGAAAATTTGATCCAGAGGAGTGTTTGGAAC
GACCTCGTGAGCATGAAAAACAGGTTAAGTCGAAATCGCAGAGAAAACCATTGAAGCATAGAGATTACGATTGGGAAAAACCCAGGTTAGTTATACCATTCTCTC
ACTGTTCCTTCAAACATTTTCTTGAATCAGTGTGTATTTTGGCCACTTTGTTGGAGAATCTGTATTTGCACCGTTCTTTTGTGTTTATGTGGTAGAAGTTAAGGC
TGTCTTGAGTTAATAATCGTTCGTTTTTTCATCCATTTGTGTCCGTAGTACATTGACCTTTAAAATTTTTAGTATATTAACTTTTAGGCTATCAAATTTTGGCCT
GTGGCCTCTCGGTGGATGCTGCTGTAGATTCAAGTTCTATGTGGCGACTTTATTTGAAAGGTAAGACTTGTGTATTGCCTGTACTGCACTTTGTTAACTGATGCG
AGTCGCATCGGTCTGAGAGGGAATGAAACATTTTTTGTAAGGGTGTGGAAACCTCTCCGACGCGTTTAAAACCTTGAGAGGGGAAGCACGAAAGGGAAAGCCCAA
AGAGAACAATATTTAGCGGTGGGATGTAAATGGTATCAGAGCAAGACACCAGGCGATGCACTCATGAGAATGTTGAGCTCTCAAGGGGTGAATTTTGAGGTTCAC
ATCAGTTAGAGAGGGAAAGAAGCATTCCTTATAAGCATGTGACTCCCCAGTAAACGCATTTTAAAACCTGAGGGGATGCACGAAAGGGAAAACCCAAAAAGGATA
ATATTTGTTAGCAATGGGCTTGAGTGCTTGAGTTGGTACAAATGGTATCATATCCAGACATCCGGCGGTATGCCAGTGAAGACGTTGGACTCCCAAAGGGGTGGA
TTATAAAGTCCTACATCGGTTGGAGAGAGGAATGAAGTCCCTAGTTGACATGTTTTAGAACGGGCATCTCTTCAACAGGTGCAGGAGCGGTTTGAAGTTCTCTAA
AAGAGAAAAACGCCAGGAAGCTTCACAGAACAAGGTAAAGCTTAAGAGTTCAGAGCTAGCCATGCCATGCCTTACGGATTGATGCGCAAGGGAAGATCGAAACTT
GGGCTTCCCAGCCTTCTGGACTGCAAGTTGTGTTTTGAAAGTTTTCAATATGAACAATTAAGAACTGGAAGAGCATAACATGGCCTTTCATATGTTATATACAAG
TTTCATCATGTCTCAGTATGAAATTAGTTGCTGATTTCATCTGTGAAGAACTTGGTCCAAGAAATGAAAGAAAATATCCACCTGTTCTTATTTTTTAGTTTTTTT
TTCAAAGATTGGCTGTGCACAACCTTTGTGGGATACGAGTGGTGGAAAATATGCACGTGTAAATATTGCATGAACTCGA
Protein sequenceShow/hide protein sequence
MAHASNPVAGVDNTIRRKFDPEECLERPREHEKQVKSKSQRKPLKHRDYDWEKPRLVIPFSHCSFKHFLESVCILATLLENLYLHRSFVFMW