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CmaCh05G013660 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh05G013660
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationCma_Chr05:10287784..10288140
RNA-Seq ExpressionCmaCh05G013660
SyntenyCmaCh05G013660
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599476.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.4e-5996.61Show/hide
Query:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR
        MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSG DDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCIS+WLAVAN CPLCR
Subjt:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR

Query:  CLIAGQPPESPSSTLIRR
        CLI+GQPPESPSSTLIRR
Subjt:  CLIAGQPPESPSSTLIRR

KAG7030453.1 E3 ubiquitin-protein ligase RING1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-5996.61Show/hide
Query:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR
        MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSG DDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCIS+WLAVAN CPLCR
Subjt:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR

Query:  CLIAGQPPESPSSTLIRR
        CLI+GQPPESPSSTLIRR
Subjt:  CLIAGQPPESPSSTLIRR

XP_022946863.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]1.1e-5997.46Show/hide
Query:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR
        MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSG DDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCIS+WLAVAN CPLCR
Subjt:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR

Query:  CLIAGQPPESPSSTLIRR
        CLIAGQPPESPSSTLIRR
Subjt:  CLIAGQPPESPSSTLIRR

XP_023545409.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]3.1e-5996.61Show/hide
Query:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR
        MAAVSVSAETTRNLA AYPIEFLFDLDMVLSG DDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCIS+WLAVAN CPLCR
Subjt:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR

Query:  CLIAGQPPESPSSTLIRR
        CLIAGQPPESPSSTLIRR
Subjt:  CLIAGQPPESPSSTLIRR

XP_038877422.1 E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida]1.2e-4781.36Show/hide
Query:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR
        MAA +V  E TRNL A YPIEFLFDLDMVLSG DDFGCCQISA+DSLVADLP VVADVCAVCLEDF PDE GKQIPCGHVYHESCIS+WL VA+ CPLCR
Subjt:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR

Query:  CLIAGQPPESPSSTLIRR
        C +AGQPP+   STLIRR
Subjt:  CLIAGQPPESPSSTLIRR

TrEMBL top hitse value%identityAlignment
A0A0A0LKR7 RING-type domain-containing protein1.0e-4476.27Show/hide
Query:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR
        MAA +V  E T NL + YPIEFLFDLD VLSG DD GCCQI+ SDS VAD PTVVADVCAVCL+DF PDE GKQIPCGHVYHESCIS+WL VA+ CPLCR
Subjt:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR

Query:  CLIAGQPPESPSSTLIRR
        CL+AGQPP+   STLIRR
Subjt:  CLIAGQPPESPSSTLIRR

A0A1S4DZX3 RING-H2 finger protein ATL5-like2.2e-4274.79Show/hide
Query:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGC-CQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLC
        MAA +V  E T  L + YPIEFLFDLD VLSG DD  C CQI+ SDS VAD PTVVADVCAVCL+DFRPDE GKQIPCGHVYHESCIS+WL VA+ CPLC
Subjt:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGC-CQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLC

Query:  RCLIAGQPPESPSSTLIRR
        RCL+AGQPP+   STLIRR
Subjt:  RCLIAGQPPESPSSTLIRR

A0A5A7V2P4 RING-H2 finger protein ATL5-like2.2e-4274.79Show/hide
Query:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGC-CQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLC
        MAA +V  E T  L + YPIEFLFDLD VLSG DD  C CQI+ SDS VAD PTVVADVCAVCL+DFRPDE GKQIPCGHVYHESCIS+WL VA+ CPLC
Subjt:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGC-CQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLC

Query:  RCLIAGQPPESPSSTLIRR
        RCL+AGQPP+   STLIRR
Subjt:  RCLIAGQPPESPSSTLIRR

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like2.2e-4276.52Show/hide
Query:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISA---SDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCP
        MAAV+V AETTRNLAAAYP+E LFDLDMVLSG DDFGCC ++A   SDS+VADLPTVVADVCAVC EDFR DE GKQIPCGHVYHE CIS+WLAVA+ CP
Subjt:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISA---SDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCP

Query:  LCRCLIAGQPPESPS
        LCR  +   PP S S
Subjt:  LCRCLIAGQPPESPS

A0A6J1G511 E3 ubiquitin-protein ligase RING1-like5.1e-6097.46Show/hide
Query:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR
        MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSG DDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCIS+WLAVAN CPLCR
Subjt:  MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR

Query:  CLIAGQPPESPSSTLIRR
        CLIAGQPPESPSSTLIRR
Subjt:  CLIAGQPPESPSSTLIRR

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING12.3e-0943.14Show/hide
Query:  CAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQPPE
        CAVC++DF    + KQ+PC H+YH+ C+  WL + N CP+CR  +    P+
Subjt:  CAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQPPE

Q8LPN7 E3 ubiquitin-protein ligase RING1-like8.0e-1038.16Show/hide
Query:  ASDSLVADLPTVVA---------DVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQPPE
        AS S +  LPTV           + CAVC+++F    D KQ+PC HV+H+ C+  WL + N CP+CR  +    P+
Subjt:  ASDSLVADLPTVVA---------DVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQPPE

Q940T5 E3 ubiquitin-protein ligase RDUF22.3e-0936.99Show/hide
Query:  ASDSLVADLPTV-VADV-------CAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQP
        AS S +  LP V ++D        CAVC E F  + + +++PC H++H+ CI  WL++ N CP+CR  +  +P
Subjt:  ASDSLVADLPTV-VADV-------CAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQP

Q9SNB6 E3 ubiquitin-protein ligase RDUF15.2e-0938.57Show/hide
Query:  SASDSL----VADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQP
        SA +SL    ++D  T     CAVC E F    +G+++PC H++H  CI  WL++ N CP+CR  +   P
Subjt:  SASDSL----VADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQP

Q9VHI7 E3 ubiquitin-protein ligase Iruka6.8e-0945.65Show/hide
Query:  CAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIA
        C++C +DF+ DE  +++PC H+YHE+CI  WL + + CP+CR  +A
Subjt:  CAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIA

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein1.1e-1146.3Show/hide
Query:  LVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR
        ++ D   V   VCA+C E+F   E+GK++ C H+YH SCI +WL + N CP+CR
Subjt:  LVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR

AT3G19950.1 RING/U-box superfamily protein5.7e-1138.16Show/hide
Query:  ASDSLVADLPTVVA---------DVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQPPE
        AS S +  LPTV           + CAVC+++F    D KQ+PC HV+H+ C+  WL + N CP+CR  +    P+
Subjt:  ASDSLVADLPTVVA---------DVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQPPE

AT3G46620.1 zinc finger (C3HC4-type RING finger) family protein3.7e-1038.57Show/hide
Query:  SASDSL----VADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQP
        SA +SL    ++D  T     CAVC E F    +G+++PC H++H  CI  WL++ N CP+CR  +   P
Subjt:  SASDSL----VADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQP

AT3G60080.1 RING/U-box superfamily protein2.8e-1053.49Show/hide
Query:  VCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR
        +CAVC EDF   E  +++PC H+YH  CI  WL+  N CPLCR
Subjt:  VCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCR

AT5G59550.1 zinc finger (C3HC4-type RING finger) family protein1.7e-1036.99Show/hide
Query:  ASDSLVADLPTV-VADV-------CAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQP
        AS S +  LP V ++D        CAVC E F  + + +++PC H++H+ CI  WL++ N CP+CR  +  +P
Subjt:  ASDSLVADLPTV-VADV-------CAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAGQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGTTTCTGTGTCGGCTGAGACTACGCGAAACTTAGCAGCGGCCTATCCAATTGAATTTCTGTTTGACCTCGACATGGTTCTGTCCGGCACCGACGAC
TTCGGTTGCTGTCAGATCAGCGCTTCGGATTCCCTTGTGGCGGATTTGCCGACGGTGGTGGCCGATGTTTGTGCCGTTTGTTTGGAGGATTTCCGGCCAGATGAG
GACGGAAAACAAATCCCCTGCGGACACGTGTACCACGAATCCTGTATTTCCGCTTGGCTCGCCGTCGCCAACCGTTGCCCTCTCTGTCGGTGCCTCATCGCCGGT
CAACCGCCGGAATCGCCTTCTTCAACTTTGATCCGACGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCGTTTCTGTGTCGGCTGAGACTACGCGAAACTTAGCAGCGGCCTATCCAATTGAATTTCTGTTTGACCTCGACATGGTTCTGTCCGGCACCGACGAC
TTCGGTTGCTGTCAGATCAGCGCTTCGGATTCCCTTGTGGCGGATTTGCCGACGGTGGTGGCCGATGTTTGTGCCGTTTGTTTGGAGGATTTCCGGCCAGATGAG
GACGGAAAACAAATCCCCTGCGGACACGTGTACCACGAATCCTGTATTTCCGCTTGGCTCGCCGTCGCCAACCGTTGCCCTCTCTGTCGGTGCCTCATCGCCGGT
CAACCGCCGGAATCGCCTTCTTCAACTTTGATCCGACGGTAG
Protein sequenceShow/hide protein sequence
MAAVSVSAETTRNLAAAYPIEFLFDLDMVLSGTDDFGCCQISASDSLVADLPTVVADVCAVCLEDFRPDEDGKQIPCGHVYHESCISAWLAVANRCPLCRCLIAG
QPPESPSSTLIRR