; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh05G014100 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh05G014100
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPhotosystem II PsbX
Genome locationCma_Chr05:10502263..10502631
RNA-Seq ExpressionCmaCh05G014100
SyntenyCmaCh05G014100
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0019904 - protein domain specific binding (molecular function)
InterPro domainsIPR009518 - Photosystem II PsbX


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061475.1 membrane family protein [Cucumis melo var. makuwa]2.0e-4589.34Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
        MASTSA+SMAMPITNA QKRAR  +AFAK LPLRPSNKP+ SS+S AKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG

Query:  VVVAAILGAIIGVSNFDPVKRT
        VVV AILGA+IGV+NFDPVKRT
Subjt:  VVVAAILGAIIGVSNFDPVKRT
KAG7030501.1 hypothetical protein SDJN02_08848, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5098.36Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
        MASTSAVSMAMPITNATQKRAR+TDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGL ATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG

Query:  VVVAAILGAIIGVSNFDPVKRT
        VVVAAILGAIIGVSNFDPVKRT
Subjt:  VVVAAILGAIIGVSNFDPVKRT
XP_022946746.1 uncharacterized protein LOC111450721 [Cucurbita moschata]5.5e-5199.18Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
        MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG

Query:  VVVAAILGAIIGVSNFDPVKRT
        VVV AILGAIIGVSNFDPVKRT
Subjt:  VVVAAILGAIIGVSNFDPVKRT
XP_022999231.1 uncharacterized protein LOC111493667 [Cucurbita maxima]1.9e-51100Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
        MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG

Query:  VVVAAILGAIIGVSNFDPVKRT
        VVVAAILGAIIGVSNFDPVKRT
Subjt:  VVVAAILGAIIGVSNFDPVKRT
XP_038890010.1 uncharacterized protein LOC120079733 [Benincasa hispida]3.1e-4690.98Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
        MASTSA+SMAMPITNA QKRAR  +AFAK LPLRPSNKP ASSNS AKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG

Query:  VVVAAILGAIIGVSNFDPVKRT
        VVV AILGA+IGV+NFDPVKRT
Subjt:  VVVAAILGAIIGVSNFDPVKRT
TrEMBL top hitse value%identityAlignment
A0A5A7V6L0 Membrane family protein9.7e-4689.34Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
        MASTSA+SMAMPITNA QKRAR  +AFAK LPLRPSNKP+ SS+S AKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG

Query:  VVVAAILGAIIGVSNFDPVKRT
        VVV AILGA+IGV+NFDPVKRT
Subjt:  VVVAAILGAIIGVSNFDPVKRT
A0A6J1FHW0 uncharacterized protein LOC1114442826.3e-4590.24Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKP-TASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAG
        MASTSAVSMAMPITNATQKR RST+AFAKALPLRPSNKP  AS +S AKFQVRAS+KEKA+AGLAATALTASMVLPEVAEAAG GV+PSLKNFLLSIAAG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKP-TASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAG

Query:  GVVVAAILGAIIGVSNFDPVKRT
        GVVV AILGAIIGVSNFDPVKRT
Subjt:  GVVVAAILGAIIGVSNFDPVKRT
A0A6J1G4H3 uncharacterized protein LOC1114507212.6e-5199.18Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
        MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG

Query:  VVVAAILGAIIGVSNFDPVKRT
        VVV AILGAIIGVSNFDPVKRT
Subjt:  VVVAAILGAIIGVSNFDPVKRT
A0A6J1HNZ4 uncharacterized protein LOC1114654058.3e-4590.24Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKP-TASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAG
        MASTSAVSMAMPITNATQKR RST+AFAKALPLRPSNKP  AS +S AKFQV+ASLKEKA+AGLAATALTASMVLPEVAEAAG GV+PSLKNFLLSIAAG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKP-TASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAG

Query:  GVVVAAILGAIIGVSNFDPVKRT
        GVVV AILGAIIGVSNFDPVKRT
Subjt:  GVVVAAILGAIIGVSNFDPVKRT
A0A6J1KCH8 uncharacterized protein LOC1114936679.1e-52100Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
        MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG

Query:  VVVAAILGAIIGVSNFDPVKRT
        VVVAAILGAIIGVSNFDPVKRT
Subjt:  VVVAAILGAIIGVSNFDPVKRT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G06520.1 photosystem II subunit X2.2e-2655.74Show/hide
Query:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG
        MASTSA+S+  P+ N T+     +  F K LPL+PS    A+     + QV+A   +KA+ G++A ALTASMV+PE+AEAAG G+SPSLKNFLLSIA+GG
Subjt:  MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGG

Query:  VVVAAILGAIIGVSNFDPVKRT
        +V+  I+G ++GVSNFDPVKRT
Subjt:  VVVAAILGAIIGVSNFDPVKRT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACTTCCGCAGTTTCAATGGCTATGCCAATTACTAATGCGACCCAGAAGAGAGCAAGGAGCACCGACGCCTTCGCTAAGGCATTGCCTTTGAGGCCTTCCAA
CAAGCCAACCGCTTCATCAAACTCCAGAGCCAAGTTCCAAGTGCGGGCTTCTTTGAAGGAGAAGGCAGTTGCTGGACTCGCTGCAACTGCACTGACGGCCTCCATGGTGC
TTCCTGAGGTGGCTGAAGCGGCTGGGCCTGGAGTTAGTCCCTCTCTAAAGAATTTCTTGCTCAGCATTGCCGCCGGTGGGGTAGTCGTCGCTGCTATCTTGGGTGCGATT
ATCGGCGTTTCCAATTTCGATCCGGTCAAGCGTACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAACTTCCGCAGTTTCAATGGCTATGCCAATTACTAATGCGACCCAGAAGAGAGCAAGGAGCACCGACGCCTTCGCTAAGGCATTGCCTTTGAGGCCTTCCAA
CAAGCCAACCGCTTCATCAAACTCCAGAGCCAAGTTCCAAGTGCGGGCTTCTTTGAAGGAGAAGGCAGTTGCTGGACTCGCTGCAACTGCACTGACGGCCTCCATGGTGC
TTCCTGAGGTGGCTGAAGCGGCTGGGCCTGGAGTTAGTCCCTCTCTAAAGAATTTCTTGCTCAGCATTGCCGCCGGTGGGGTAGTCGTCGCTGCTATCTTGGGTGCGATT
ATCGGCGTTTCCAATTTCGATCCGGTCAAGCGTACCTGA
Protein sequenceShow/hide protein sequence
MASTSAVSMAMPITNATQKRARSTDAFAKALPLRPSNKPTASSNSRAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGPGVSPSLKNFLLSIAAGGVVVAAILGAI
IGVSNFDPVKRT