; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G000140 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G000140
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionmediator of RNA polymerase II transcription subunit 15a-like
Genome locationCma_Chr06:97097..98621
RNA-Seq ExpressionCmaCh06G000140
SyntenyCmaCh06G000140
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0031490 - chromatin DNA binding (molecular function)
InterPro domainsIPR044661 - Mediator of RNA polymerase II transcription subunit 15a/b/c-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596167.1 Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. sororia]1.1e-17988.27Show/hide
Query:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR
        MYLENHFNSKF PQTHEASRLSQIAERALPKIACNSLYGRASPT PSTDGLGKISSNVSSLWSPISQFS+                              
Subjt:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR

Query:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
          ETTRFGNNGQLS TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGG SKNMKRKMNATTLN MPSPCSDIVGSEP
Subjt:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP

Query:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
        TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYR ATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
Subjt:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL

Query:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
        NT+CGTED EFRDMWSKATSLL+A LRT+PVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Subjt:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT

KAG7027708.1 Mediator of RNA polymerase II transcription subunit 15a [Cucurbita argyrosperma subsp. argyrosperma]8.6e-18088.27Show/hide
Query:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR
        MYLENHFNSKF PQTHEASRLSQIAERALPKIACNSLYGRASPT PSTDGLGKISSNVSSLWSPISQFS+                              
Subjt:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR

Query:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
          ETTRFGNNGQLS TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGG SKNMKRKMNATTLNDMPSPCSDIVGSEP
Subjt:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP

Query:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
        TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYR ATEGKNSV HSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
Subjt:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL

Query:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
        NT+CGTED EFRDMWSKATSLL+A LRT+PVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Subjt:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT

XP_022933464.1 mediator of RNA polymerase II transcription subunit 15a isoform X3 [Cucurbita moschata]3.5e-18188.8Show/hide
Query:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR
        MYLENHFNSKF PQTHEASRLSQIAERALPKIACNSLYGRASPT PSTDGLGKISSNVSSLWSPISQFS+                              
Subjt:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR

Query:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
          ETTRFGNNGQLS TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGG SKNMKRKMNATTLNDMPSPCSDIVGSEP
Subjt:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP

Query:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
        TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYR ATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
Subjt:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL

Query:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
        NT+CGTED EFRDMWSKATSLL+AFLRT+PVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Subjt:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT

XP_022971183.1 mediator of RNA polymerase II transcription subunit 15a isoform X1 [Cucurbita maxima]6.5e-21299.73Show/hide
Query:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR
        MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR
Subjt:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR

Query:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
         AETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
Subjt:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP

Query:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
        TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
Subjt:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL

Query:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
        NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Subjt:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT

XP_022971204.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita maxima]7.8e-18991.47Show/hide
Query:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR
        MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSR                              
Subjt:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR

Query:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
          ETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
Subjt:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP

Query:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
        TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
Subjt:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL

Query:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
        NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Subjt:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT

TrEMBL top hitse value%identityAlignment
A0A6J1D158 probable mediator of RNA polymerase II transcription subunit 15c isoform X11.0e-12266.49Show/hide
Query:  LENHFNSKFFPQTH-EASRLSQIAERALPKIACNSLY---GRASPT-SPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTM
        L+NH NSK  PQ+H EAS+LS+IAERAL K  C+S+Y   GRASPT S ST GLGK SSNVS L S   Q+    +S+ LLNSK++I+V SHEIRS    
Subjt:  LENHFNSKFFPQTH-EASRLSQIAERALPKIACNSLY---GRASPT-SPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTM

Query:  TCRFAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWF----C-EKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPC
        T +FAE T  G++  LST TQP NRLLKAV+S+S++ALR AI  ISSV NM D +TEP      C +K  HLSLQDG G S NMKRK+ A TLNDMPSPC
Subjt:  TCRFAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWF----C-EKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPC

Query:  SDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPED
        SD  GSE TVTS SKKLKKL+DNALLEEMRNIN+  +ETVLELD+ +NVNRR ANAGTV+RC+Y   ++  N +FH   NTLKLPVLSVKLLVPLDYPED
Subjt:  SDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPED

Query:  YPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAA
        YPVFLSK NTDCG ED E RD+  KATS+L AFLRT+P  LSL E A+AWD+CAR VV +YAQR GGGCFSSRYG+WEDC A
Subjt:  YPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAA

A0A6J1D3G7 mediator of RNA polymerase II transcription subunit 15a-like isoform X21.0e-12266.49Show/hide
Query:  LENHFNSKFFPQTH-EASRLSQIAERALPKIACNSLY---GRASPT-SPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTM
        L+NH NSK  PQ+H EAS+LS+IAERAL K  C+S+Y   GRASPT S ST GLGK SSNVS L S   Q+    +S+ LLNSK++I+V SHEIRS    
Subjt:  LENHFNSKFFPQTH-EASRLSQIAERALPKIACNSLY---GRASPT-SPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTM

Query:  TCRFAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWF----C-EKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPC
        T +FAE T  G++  LST TQP NRLLKAV+S+S++ALR AI  ISSV NM D +TEP      C +K  HLSLQDG G S NMKRK+ A TLNDMPSPC
Subjt:  TCRFAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWF----C-EKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPC

Query:  SDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPED
        SD  GSE TVTS SKKLKKL+DNALLEEMRNIN+  +ETVLELD+ +NVNRR ANAGTV+RC+Y   ++  N +FH   NTLKLPVLSVKLLVPLDYPED
Subjt:  SDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPED

Query:  YPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAA
        YPVFLSK NTDCG ED E RD+  KATS+L AFLRT+P  LSL E A+AWD+CAR VV +YAQR GGGCFSSRYG+WEDC A
Subjt:  YPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAA

A0A6J1EZU5 mediator of RNA polymerase II transcription subunit 15a isoform X31.7e-18188.8Show/hide
Query:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR
        MYLENHFNSKF PQTHEASRLSQIAERALPKIACNSLYGRASPT PSTDGLGKISSNVSSLWSPISQFS+                              
Subjt:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR

Query:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
          ETTRFGNNGQLS TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGG SKNMKRKMNATTLNDMPSPCSDIVGSEP
Subjt:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP

Query:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
        TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYR ATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
Subjt:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL

Query:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
        NT+CGTED EFRDMWSKATSLL+AFLRT+PVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Subjt:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT

A0A6J1I7U8 mediator of RNA polymerase II transcription subunit 15a isoform X13.2e-21299.73Show/hide
Query:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR
        MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR
Subjt:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR

Query:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
         AETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
Subjt:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP

Query:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
        TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
Subjt:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL

Query:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
        NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Subjt:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT

A0A6J1I7W8 mediator of RNA polymerase II transcription subunit 15a-like3.8e-18991.47Show/hide
Query:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR
        MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSR                              
Subjt:  MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCR

Query:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
          ETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP
Subjt:  FAETTRFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEP

Query:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
        TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL
Subjt:  TVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKL

Query:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
        NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT
Subjt:  NTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT

SwissProt top hitse value%identityAlignment
F4I171 Mediator of RNA polymerase II transcription subunit 15a4.0e-3133.89Show/hide
Query:  NGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRIT-------------EPWFCEKETHLS-----LQDGGGFSKNMKRKMNATTL------
        +G+ S T  P  RL++AV+SIS +AL +A+ +I SV +M DRI              E      +  L       Q+G   +K MKR   A  L      
Subjt:  NGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRIT-------------EPWFCEKETHLS-----LQDGGGFSKNMKRKMNATTL------

Query:  -----NDMPSPCSDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVN-------RRLANAGTVLRCSYRGATEGKNSVFHSENNT
             N      S+    E T TS  KK +  +++ALLEE++ IN+  I+TV+E+  DE+           +   GT +R S+   +       H  ++T
Subjt:  -----NDMPSPCSDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVN-------RRLANAGTVLRCSYRGATEGKNSVFHSENNT

Query:  LKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCA
           P+  ++LLVP  YP   P  L KL  +   E+    D+ SKA +  +  LR+    +SL++ AK WD CARAV+C+YAQ+ GGG FSS+YG+WE   
Subjt:  LKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCA

Query:  A
        A
Subjt:  A

Q9SHV7 Probable mediator of RNA polymerase II transcription subunit 15c2.2e-2126.15Show/hide
Query:  TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW-------------FCEKETHLSLQDGGGFSKNMKRKMN-----ATTLNDMPSPCSDIVG
        T +P +RL+KA ++ S ++L  ++ EISSV +M D I   +               E+  + +  +    SK MKR +N      ++  D     S +  
Subjt:  TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW-------------FCEKETHLSLQDGGGFSKNMKRKMN-----ATTLNDMPSPCSDIVG

Query:  SEPTVTSISKKLKKLSDN-ALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSY---------RGATEGKNSVFHSENNTLKLPVLSVKLLVPL
           + TS   K+  ++   ALL+E++  N   +ETV+E+  ++++       GT++ C+Y         +   +    +F+     ++  +  ++LL P+
Subjt:  SEPTVTSISKKLKKLSDN-ALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSY---------RGATEGKNSVFHSENNTLKLPVLSVKLLVPL

Query:  DYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWE
        DYP   P+ L +++ D  T   ++ D+ ++  S  S  ++        +  A+ W++CARA + +YA+R GGG FSS+YG+WE
Subjt:  DYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWE

Arabidopsis top hitse value%identityAlignment
AT1G15780.1 unknown protein2.9e-3233.89Show/hide
Query:  NGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRIT-------------EPWFCEKETHLS-----LQDGGGFSKNMKRKMNATTL------
        +G+ S T  P  RL++AV+SIS +AL +A+ +I SV +M DRI              E      +  L       Q+G   +K MKR   A  L      
Subjt:  NGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRIT-------------EPWFCEKETHLS-----LQDGGGFSKNMKRKMNATTL------

Query:  -----NDMPSPCSDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVN-------RRLANAGTVLRCSYRGATEGKNSVFHSENNT
             N      S+    E T TS  KK +  +++ALLEE++ IN+  I+TV+E+  DE+           +   GT +R S+   +       H  ++T
Subjt:  -----NDMPSPCSDIVGSEPTVTSISKKLKKLSDNALLEEMRNINRHFIETVLELDTDENVN-------RRLANAGTVLRCSYRGATEGKNSVFHSENNT

Query:  LKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCA
           P+  ++LLVP  YP   P  L KL  +   E+    D+ SKA +  +  LR+    +SL++ AK WD CARAV+C+YAQ+ GGG FSS+YG+WE   
Subjt:  LKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCA

Query:  A
        A
Subjt:  A

AT2G10440.1 unknown protein1.6e-2226.15Show/hide
Query:  TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW-------------FCEKETHLSLQDGGGFSKNMKRKMN-----ATTLNDMPSPCSDIVG
        T +P +RL+KA ++ S ++L  ++ EISSV +M D I   +               E+  + +  +    SK MKR +N      ++  D     S +  
Subjt:  TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW-------------FCEKETHLSLQDGGGFSKNMKRKMN-----ATTLNDMPSPCSDIVG

Query:  SEPTVTSISKKLKKLSDN-ALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSY---------RGATEGKNSVFHSENNTLKLPVLSVKLLVPL
           + TS   K+  ++   ALL+E++  N   +ETV+E+  ++++       GT++ C+Y         +   +    +F+     ++  +  ++LL P+
Subjt:  SEPTVTSISKKLKKLSDN-ALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSY---------RGATEGKNSVFHSENNTLKLPVLSVKLLVPL

Query:  DYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWE
        DYP   P+ L +++ D  T   ++ D+ ++  S  S  ++        +  A+ W++CARA + +YA+R GGG FSS+YG+WE
Subjt:  DYPEDYPVFLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWE

AT2G10440.2 unknown protein7.1e-2327.64Show/hide
Query:  TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW-------------FCEKETHLSLQDGGGFSKNMKRKMN-----ATTLNDMPSPCSDIVG
        T +P +RL+KA ++ S ++L  ++ EISSV +M D I   +               E+  + +  +    SK MKR +N      ++  D     S +  
Subjt:  TTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPW-------------FCEKETHLSLQDGGGFSKNMKRKMN-----ATTLNDMPSPCSDIVG

Query:  SEPTVTSISKKLKKLSDN-ALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL-PVLSVKLLVPLDYPEDYPV
           + TS   K+  ++   ALL+E++  N   +ETV+E+  ++++       GT++ C+Y  A    ++ F     + K+  +  ++LL P+DYP   P+
Subjt:  SEPTVTSISKKLKKLSDN-ALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKL-PVLSVKLLVPLDYPEDYPV

Query:  FLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWE
         L +++ D  T   ++ D+ ++  S  S  ++        +  A+ W++CARA + +YA+R GGG FSS+YG+WE
Subjt:  FLSKLNTDCGTEDGEFRDMWSKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTGGAGAATCATTTCAACTCGAAATTCTTTCCTCAAACTCATGAGGCTTCACGGCTTTCTCAGATTGCAGAGCGAGCACTTCCCAAAATTGCTTGCAAT
TCATTGTATGGAAGAGCTTCTCCCACCTCTCCTTCAACAGATGGGCTTGGAAAAATTTCTTCAAATGTTTCCTCCCTTTGGAGCCCAATCTCTCAATTCTCTCGA
GGTTATAGTTCTCTCAAGTTACTTAATTCCAAATCAGAAATCGAAGTCCCATCTCATGAGATCAGAAGCTATAACACAATGACCTGTCGGTTTGCAGAAACTACT
CGTTTTGGAAACAATGGACAATTGTCAACAACAACTCAGCCTCATAATCGCTTGCTTAAAGCAGTTGAGTCAATATCAAATGAAGCATTAAGAGCAGCTATACTA
GAAATAAGTTCAGTTACGAATATGGAAGACAGAATAACAGAACCGTGGTTTTGCGAAAAGGAAACACATTTAAGCCTGCAAGATGGGGGCGGTTTCTCAAAGAAT
ATGAAGCGAAAAATGAATGCAACAACCTTAAATGACATGCCATCGCCTTGCAGTGATATTGTTGGGTCTGAACCAACAGTTACATCAATAAGCAAGAAGCTCAAG
AAACTGTCTGATAATGCCCTATTGGAAGAAATGAGAAACATAAACAGACATTTCATTGAAACGGTCTTAGAGTTAGATACGGACGAGAATGTCAATAGGCGATTG
GCCAATGCGGGTACCGTTCTTCGATGTTCATATAGAGGTGCAACCGAAGGCAAGAATTCAGTGTTCCATTCTGAAAACAACACACTAAAGTTGCCAGTGCTTTCA
GTGAAGCTGCTTGTGCCCCTGGATTATCCAGAAGATTACCCTGTATTCCTAAGCAAATTGAACACAGACTGCGGTACTGAGGATGGAGAATTTAGAGACATGTGG
AGCAAAGCGACGTCCCTGCTAAGTGCATTCCTCCGCACCTCTCCTGTCTACTTGTCTCTTGAAGAGTGTGCAAAGGCATGGGATGAATGTGCTCGCGCTGTGGTA
TGTGATTATGCACAACGTGCTGGCGGAGGATGCTTCAGCTCTCGATATGGGAGTTGGGAGGACTGCGCCGCTACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTTGGAGAATCATTTCAACTCGAAATTCTTTCCTCAAACTCATGAGGCTTCACGGCTTTCTCAGATTGCAGAGCGAGCACTTCCCAAAATTGCTTGCAAT
TCATTGTATGGAAGAGCTTCTCCCACCTCTCCTTCAACAGATGGGCTTGGAAAAATTTCTTCAAATGTTTCCTCCCTTTGGAGCCCAATCTCTCAATTCTCTCGA
GGTTATAGTTCTCTCAAGTTACTTAATTCCAAATCAGAAATCGAAGTCCCATCTCATGAGATCAGAAGCTATAACACAATGACCTGTCGGTTTGCAGAAACTACT
CGTTTTGGAAACAATGGACAATTGTCAACAACAACTCAGCCTCATAATCGCTTGCTTAAAGCAGTTGAGTCAATATCAAATGAAGCATTAAGAGCAGCTATACTA
GAAATAAGTTCAGTTACGAATATGGAAGACAGAATAACAGAACCGTGGTTTTGCGAAAAGGAAACACATTTAAGCCTGCAAGATGGGGGCGGTTTCTCAAAGAAT
ATGAAGCGAAAAATGAATGCAACAACCTTAAATGACATGCCATCGCCTTGCAGTGATATTGTTGGGTCTGAACCAACAGTTACATCAATAAGCAAGAAGCTCAAG
AAACTGTCTGATAATGCCCTATTGGAAGAAATGAGAAACATAAACAGACATTTCATTGAAACGGTCTTAGAGTTAGATACGGACGAGAATGTCAATAGGCGATTG
GCCAATGCGGGTACCGTTCTTCGATGTTCATATAGAGGTGCAACCGAAGGCAAGAATTCAGTGTTCCATTCTGAAAACAACACACTAAAGTTGCCAGTGCTTTCA
GTGAAGCTGCTTGTGCCCCTGGATTATCCAGAAGATTACCCTGTATTCCTAAGCAAATTGAACACAGACTGCGGTACTGAGGATGGAGAATTTAGAGACATGTGG
AGCAAAGCGACGTCCCTGCTAAGTGCATTCCTCCGCACCTCTCCTGTCTACTTGTCTCTTGAAGAGTGTGCAAAGGCATGGGATGAATGTGCTCGCGCTGTGGTA
TGTGATTATGCACAACGTGCTGGCGGAGGATGCTTCAGCTCTCGATATGGGAGTTGGGAGGACTGCGCCGCTACCTGA
Protein sequenceShow/hide protein sequence
MYLENHFNSKFFPQTHEASRLSQIAERALPKIACNSLYGRASPTSPSTDGLGKISSNVSSLWSPISQFSRGYSSLKLLNSKSEIEVPSHEIRSYNTMTCRFAETT
RFGNNGQLSTTTQPHNRLLKAVESISNEALRAAILEISSVTNMEDRITEPWFCEKETHLSLQDGGGFSKNMKRKMNATTLNDMPSPCSDIVGSEPTVTSISKKLK
KLSDNALLEEMRNINRHFIETVLELDTDENVNRRLANAGTVLRCSYRGATEGKNSVFHSENNTLKLPVLSVKLLVPLDYPEDYPVFLSKLNTDCGTEDGEFRDMW
SKATSLLSAFLRTSPVYLSLEECAKAWDECARAVVCDYAQRAGGGCFSSRYGSWEDCAAT