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CmaCh06G001900 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G001900
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr06:971049..972517
RNA-Seq ExpressionCmaCh06G001900
SyntenyCmaCh06G001900
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596306.1 hypothetical protein SDJN03_09486, partial [Cucurbita argyrosperma subsp. sororia]8.2e-2050.31Show/hide
Query:  MFCLFLFPLATTERELKRVRR-AVRSHRPCRVSATG------GISLPTRLFNSWPLSFSAVGVLPSPPLDPSTQSAYVTTNQINGPQGLRLPLEIWTILG
        MFCLFLFPLATTERELK VRR      +P   SA+G      G+SL  RL +S    +      P+ P     +S  +  +  +   G       W    
Subjt:  MFCLFLFPLATTERELKRVRR-AVRSHRPCRVSATG------GISLPTRLFNSWPLSFSAVGVLPSPPLDPSTQSAYVTTNQINGPQGLRLPLEIWTILG

Query:  FRYMAGTSVVKCKRGGACILCFPTSPLHPLSQSLLYSSVALGALVFSVQLSDSDQRSSSKN
               SV+   +  ACILCFPTS LHPLSQSLLYSSVALGALVFSVQLSDSDQRSSSKN
Subjt:  FRYMAGTSVVKCKRGGACILCFPTSPLHPLSQSLLYSSVALGALVFSVQLSDSDQRSSSKN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGCTTATTCCTTTTCCCCTTAGCCACTACCGAGCGGGAACTGAAACGCGTGCGCCGTGCGGTGCGCAGCCACCGGCCCTGCCGGGTGTCAGCCACTGGCGGAAT
CAGCCTCCCGACGCGATTGTTCAATAGTTGGCCTCTCTCTTTCAGCGCGGTTGGTGTCCTCCCATCTCCGCCGCTGGATCCATCAACCCAATCAGCCTACGTCACAACCA
ATCAAATCAACGGCCCTCAAGGCCTCCGACTCCCACTGGAAATCTGGACCATTTTGGGGTTCCGTTATATGGCAGGCACAAGCGTAGTAAAGTGCAAAAGAGGAGGTGCA
TGCATTTTGTGCTTCCCAACTTCTCCTCTTCATCCTCTCTCTCAATCTCTACTTTATTCCTCGGTTGCTTTGGGAGCACTCGTCTTCTCCGTTCAACTTTCCGATTCCGA
TCAGAGATCCAGCTCTAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGCTTATTCCTTTTCCCCTTAGCCACTACCGAGCGGGAACTGAAACGCGTGCGCCGTGCGGTGCGCAGCCACCGGCCCTGCCGGGTGTCAGCCACTGGCGGAAT
CAGCCTCCCGACGCGATTGTTCAATAGTTGGCCTCTCTCTTTCAGCGCGGTTGGTGTCCTCCCATCTCCGCCGCTGGATCCATCAACCCAATCAGCCTACGTCACAACCA
ATCAAATCAACGGCCCTCAAGGCCTCCGACTCCCACTGGAAATCTGGACCATTTTGGGGTTCCGTTATATGGCAGGCACAAGCGTAGTAAAGTGCAAAAGAGGAGGTGCA
TGCATTTTGTGCTTCCCAACTTCTCCTCTTCATCCTCTCTCTCAATCTCTACTTTATTCCTCGGTTGCTTTGGGAGCACTCGTCTTCTCCGTTCAACTTTCCGATTCCGA
TCAGAGATCCAGCTCTAAGAATTGA
Protein sequenceShow/hide protein sequence
MFCLFLFPLATTERELKRVRRAVRSHRPCRVSATGGISLPTRLFNSWPLSFSAVGVLPSPPLDPSTQSAYVTTNQINGPQGLRLPLEIWTILGFRYMAGTSVVKCKRGGA
CILCFPTSPLHPLSQSLLYSSVALGALVFSVQLSDSDQRSSSKN