; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G002080 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G002080
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionSel1-like protein
Genome locationCma_Chr06:1064192..1067175
RNA-Seq ExpressionCmaCh06G002080
SyntenyCmaCh06G002080
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006597 - Sel1-like repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]3.3e-4693Show/hide
Query:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
        MEISGGTE LNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD++T DS
Subjt:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]4.3e-4693Show/hide
Query:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
        MEISGGTE L+RVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD+T DS
Subjt:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
XP_022934166.1 uncharacterized protein LOC111441393 [Cucurbita moschata]5.5e-4998Show/hide
Query:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
        ME SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD+THDS
Subjt:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]6.5e-50100Show/hide
Query:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
        MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
Subjt:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
XP_023538764.1 uncharacterized protein LOC111799597 [Cucurbita pepo subsp. pepo]7.2e-4998Show/hide
Query:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
        MEISGGTEA NRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD+THDS
Subjt:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
TrEMBL top hitse value%identityAlignment
A0A1S3B5I4 uncharacterized protein LOC1034862541.6e-4693Show/hide
Query:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
        MEISGGTE LNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD++T DS
Subjt:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
A0A5D3DNP0 Sel1-like protein1.6e-4693Show/hide
Query:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
        MEISGGTE LNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD++T DS
Subjt:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
A0A6J1DSS4 uncharacterized protein LOC1110240622.1e-4693Show/hide
Query:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
        MEISGGTE L+RVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD+T DS
Subjt:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
A0A6J1F1H3 uncharacterized protein LOC1114413932.7e-4998Show/hide
Query:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
        ME SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD+THDS
Subjt:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
A0A6J1I270 uncharacterized protein LOC1114702213.1e-50100Show/hide
Query:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
        MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
Subjt:  MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)6.3e-3580.49Show/hide
Query:  VPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
        VPLS VVSDC KRWFKDTL EAK G+I MQVL+GQMYYSGYG+P+DA+KGR+W+TKASR RSSVWKV DK PGYNASDSDS+
Subjt:  VPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
AT5G05360.1 unknown protein2.2e-3570.65Show/hide
Query:  SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD
        + G++ +NRVPL++VV DCV+RWF+DTL EAK GD+ MQVLVGQMY SGYGIP+D  KGR W+ KASR+RSS W+VSDK PGYNASDSDS+D
Subjt:  SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD
AT5G05360.2 unknown protein4.2e-3167.86Show/hide
Query:  SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
        + G++ +NRVPL++VV DCV+RWF+DTL EAK GD+ MQVLVGQMY SGYGIP+D  KGR W+ KASR+RSS W+VSDK PG N
Subjt:  SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCGGAGGAACAGAAGCCTTGAATCGCGTTCCATTATCAGAAGTTGTTTCCGATTGCGTCAAAAGATGGTTTAAGGATACTTTGACAGAGGCCAAG
CGTGGGGATATCAACATGCAGGTCTTGGTTGGTCAAATGTATTATAGCGGTTATGGCATTCCAAGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCA
AGAAGTCGGTCATCCGTCTGGAAAGTTAGTGATAAACATCCAGGTTATAATGCTAGCGATTCGGACTCAGATGACGTGACTCACGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
TCCAGACGCTAGACCTTTTTCCTGGGTTTTTTCCTTTCCCTTTTTCTTTTCCATTTTTTAACGAGCCAGAGGAAAACAGTTTCCGTACCGGCAAGAAGGAAGCGT
TTTTGGTGCCTCAGAATCTCGCCAAATCACAAAGTCAAGGTTTCGGTTGATTAATCGAAGCCGTTAGTGTTGAAATAGAATGGAGATTAGCGGAGGAACAGAAGC
CTTGAATCGCGTTCCATTATCAGAAGTTGTTTCCGATTGCGTCAAAAGATGGTTTAAGGATACTTTGACAGAGGCCAAGCGTGGGGATATCAACATGCAGGTCTT
GGTTGGTCAAATGTATTATAGCGGTTATGGCATTCCAAGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGGTCATCCGTCTGGAAAGT
TAGTGATAAACATCCAGGTTATAATGCTAGCGATTCGGACTCAGATGACGTGACTCACGATTCTTAACTAGATCAGTGCTGTATGTCATGTCAAAACAACCACTG
GATGTGCTTTTCACTTGGGGAACTCTACTTGCTCAGCAACATTCGTAGCTGCGAAGAACAACATTCGTGCACTTCCTGAATGTTGAATTTAACGGATGTAATATG
CTTTGATTTCACCTTTACCCTACAAAGAATCTGTGGCACTTCCCTGTGGTCAAATAGGCTAAATCCTATATCCACTTTTTATTCTGTTTAGGTTGCCTCTGTTCA
CTGTCTGCCAGACATTTTCAATTGATTTTTGCATAATTGTTAAGGTCTGAACTCTTTTAGTTGCTAATAAAATTCCCTTTTAAGAACAACCCGGGTGCCTTCTCT
TTGGTCTTTCCTCTTTTTTAGTTAGTTGCTAGCCTATAACACCTTTATCTTGCTGTTAAAGGTATAAAATCTCACCAAATTCCTTCATTCTTCTTTAAATAAGGA
TGAGAGATGGTCATTGAGGCAGGGAGATCGGTTATAGTTCAT
Protein sequenceShow/hide protein sequence
MEISGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDVTHDS