; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G003060 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G003060
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCma_Chr06:1454169..1454720
RNA-Seq ExpressionCmaCh06G003060
SyntenyCmaCh06G003060
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596414.1 RING-H2 finger protein ATL33, partial [Cucurbita argyrosperma subsp. sororia]6.6e-9395.08Show/hide
Query:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG
        MD  TTVMNRPT PFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSG AVT+VAVNRISNDVAAAV YNKD+H KEVG
Subjt:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG

Query:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
        NECPVCLSAF DGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
Subjt:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV

XP_022938590.1 RING-H2 finger protein ATL33-like [Cucurbita moschata]8.7e-9395.08Show/hide
Query:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG
        MD  TTVMNRPT PFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSG AVT+VAVNRISNDVAAAV YNKD+H KEVG
Subjt:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG

Query:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
        NECPVCLSAF DGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
Subjt:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV

XP_022971418.1 RING-H2 finger protein ATL33-like [Cucurbita maxima]6.2e-99100Show/hide
Query:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG
        MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG
Subjt:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG

Query:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
        NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
Subjt:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV

XP_023540894.1 RING-H2 finger protein ATL33-like [Cucurbita pepo subsp. pepo]3.5e-9495.63Show/hide
Query:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG
        MD  TTVMNRPT PFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARL GAAVT+VAVNRISNDVAAAV+YNKDQHCKEVG
Subjt:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG

Query:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
        NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV IAVKRPINNRAPPRPAASRN+DYQQGLPDAGNLV
Subjt:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV

XP_038905078.1 RING-H2 finger protein ATL33 [Benincasa hispida]8.1e-7578.8Show/hide
Query:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRI-SNDVAAAVMYNKDQHCKEV
        MD   ++MNR   P P+P RTV FSPIEFIL LVAVI IPALVYSFF AIKC PNLLRLW  RSARLSGAAVT+V  NR  S+DVAAAV YNKD+HCKEV
Subjt:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRI-SNDVAAAVMYNKDQHCKEV

Query:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
         NECPVCLSAF DGE++RQLAACKHSFHVDCIDMWLYSHPNCPVCRA V +AVKRPINN AP RPA SR+DD+QQGLPDAG LV
Subjt:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV

TrEMBL top hitse value%identityAlignment
A0A0A0LA67 RING-type E3 ubiquitin transferase4.1e-7275Show/hide
Query:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRI-SNDVAAAVMYNKDQHCKEV
        MD   + MNR   P+P+P RTV FSPIEFIL LVAVI IPALVYSF  AIKC PN LRLW +RS RLSGA  T+V  NR  S+DVAAAV YNKD+HCKEV
Subjt:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRI-SNDVAAAVMYNKDQHCKEV

Query:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
        GNECPVCLSAF DGE++RQLA CKHSFHVDCIDMWLYSHPNCPVCRA V + VKRPI+N AP RPAASR+DD+ QGLPDAG LV
Subjt:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV

A0A5D3DN65 RING-type E3 ubiquitin transferase2.6e-7174.46Show/hide
Query:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRI-SNDVAAAVMYNKDQHCKEV
        MD   + MNR   P+P+P RTV FSPIEFIL LVAVI IPAL YSF  AIKC PN LRLW +RS RLS A VTMV  NR  S+DVAAAV YNKD+HCKEV
Subjt:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRI-SNDVAAAVMYNKDQHCKEV

Query:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
        G ECPVCLSAF DGE++RQL  CKHSFHVDCIDMWLYSHPNCPVCRA V + VKRPINN AP RPAASR+DD+ QGLPDAG LV
Subjt:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV

A0A6J1F238 RING-type E3 ubiquitin transferase4.1e-7276.63Show/hide
Query:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRIS-NDVAAAVMYNKDQHCKEV
        MD    +MNR T P P+P RT  FSPIEFIL L+AVI IPALVYSFF AIKC P LLRLW RRSARLSGA VT+VA NR S +DVA    YNKD+  KEV
Subjt:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRIS-NDVAAAVMYNKDQHCKEV

Query:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
        GNECPVCLSAF DGE++RQL ACKHSFHVDCIDMW YSHPNCPVCRA +AIAVKRPINNRAP RPAASR+DD+ QGLPDAGNLV
Subjt:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV

A0A6J1FK72 RING-type E3 ubiquitin transferase4.2e-9395.08Show/hide
Query:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG
        MD  TTVMNRPT PFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSG AVT+VAVNRISNDVAAAV YNKD+H KEVG
Subjt:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG

Query:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
        NECPVCLSAF DGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
Subjt:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV

A0A6J1I6T3 RING-type E3 ubiquitin transferase3.0e-99100Show/hide
Query:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG
        MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG
Subjt:  MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVG

Query:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
        NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV
Subjt:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV

SwissProt top hitse value%identityAlignment
O80927 RING-H2 finger protein ATL333.4e-3138.27Show/hide
Query:  TTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSG----AAVTMVAVNRISNDVAAAVMYNKDQHCKEVG
        T ++  P  PFP+P R++  +P++ I  ++A + +PALVY+ F    CS +       R++  S     A V    +   +    +   ++KD H KE+G
Subjt:  TTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSG----AAVTMVAVNRISNDVAAAVMYNKDQHCKEVG

Query:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAI-----AVKRPIN-----NRAPPR---PAASRNDDYQQGLPDAGNLV
        NEC VCL  F D +++RQL+ CKH+FHV CI+ WL  HPNCP+CR  V++     A   P+N     NR+       A SR+DD++QGLPDA +LV
Subjt:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAI-----AVKRPIN-----NRAPPR---PAASRNDDYQQGLPDAGNLV

P0C035 RING-H2 finger protein ATL604.1e-1363.27Show/hide
Query:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV
        G EC VCLS   DG+K R L  C H FHVDCIDMW  SH  CP+CR TV
Subjt:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV

Q9LRB7 E3 ubiquitin-protein ligase EL53.2e-1345.12Show/hide
Query:  AAVMYNKDQHCKEVGNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAAS
        AA    +++   + G EC VCL+   DGE+ R L  C H FH +C+DMWL SH  CP+CR TV   V  P     PP P AS
Subjt:  AAVMYNKDQHCKEVGNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAAS

Q9LX93 E3 ubiquitin-protein ligase RING11.2e-1251.79Show/hide
Query:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRP
        G EC VCL+ F + E +R L  C H+FH++CID WL SH NCP+CRA V +  + P
Subjt:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRP

Q9XF63 RING-H2 finger protein ATL31.4e-1350.82Show/hide
Query:  VMYNKDQHCKEVGNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV
        +++ +   CK+ G EC +CLS    G+K R L  C HSFHV+CIDMW  SH  CP+CR TV
Subjt:  VMYNKDQHCKEVGNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV

Arabidopsis top hitse value%identityAlignment
AT1G53820.1 RING/U-box superfamily protein2.9e-1463.27Show/hide
Query:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV
        G EC VCLS   DG+K R L  C H FHVDCIDMW  SH  CP+CR TV
Subjt:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV

AT1G72310.1 RING/U-box superfamily protein1.0e-1450.82Show/hide
Query:  VMYNKDQHCKEVGNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV
        +++ +   CK+ G EC +CLS    G+K R L  C HSFHV+CIDMW  SH  CP+CR TV
Subjt:  VMYNKDQHCKEVGNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV

AT2G37580.1 RING/U-box superfamily protein2.4e-3238.27Show/hide
Query:  TTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSG----AAVTMVAVNRISNDVAAAVMYNKDQHCKEVG
        T ++  P  PFP+P R++  +P++ I  ++A + +PALVY+ F    CS +       R++  S     A V    +   +    +   ++KD H KE+G
Subjt:  TTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSG----AAVTMVAVNRISNDVAAAVMYNKDQHCKEVG

Query:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAI-----AVKRPIN-----NRAPPR---PAASRNDDYQQGLPDAGNLV
        NEC VCL  F D +++RQL+ CKH+FHV CI+ WL  HPNCP+CR  V++     A   P+N     NR+       A SR+DD++QGLPDA +LV
Subjt:  NECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAI-----AVKRPIN-----NRAPPR---PAASRNDDYQQGLPDAGNLV

AT4G15975.1 RING/U-box superfamily protein1.1e-1359.57Show/hide
Query:  ECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV
        EC VCLS F D E  R +  CKH+FHVDCIDMW +SH +CP+CR+ +
Subjt:  ECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATV

AT5G10380.1 RING/U-box superfamily protein8.6e-1451.79Show/hide
Query:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRP
        G EC VCL+ F + E +R L  C H+FH++CID WL SH NCP+CRA V +  + P
Subjt:  GNECPVCLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCCATCACCACCGTGATGAATCGACCAACGTCGCCGTTCCCCTCCCCTCGTCGGACCGTTGCTTTCTCTCCAATCGAGTTCATCCTCGCCCTCGTCGCT
GTTATCATCATCCCCGCCCTTGTCTACTCCTTCTTCATCGCCATCAAGTGCTCCCCCAATCTCCTCCGCCTCTGGCCGCGGAGATCTGCCAGGCTATCCGGCGCC
GCCGTCACCATGGTGGCTGTGAATCGTATTTCTAATGATGTGGCGGCGGCTGTTATGTACAACAAGGACCAGCACTGTAAGGAAGTCGGTAACGAGTGTCCTGTG
TGCCTATCGGCGTTCGCCGACGGCGAGAAGGTCCGGCAACTCGCCGCCTGTAAACACTCTTTTCATGTAGATTGCATCGACATGTGGCTCTATTCTCACCCCAAT
TGCCCTGTTTGTCGCGCCACCGTCGCCATCGCCGTTAAACGGCCGATTAACAACCGAGCACCGCCGCGGCCAGCGGCTTCTAGGAACGACGATTACCAGCAAGGT
CTGCCGGATGCCGGCAATTTAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCCCATCACCACCGTGATGAATCGACCAACGTCGCCGTTCCCCTCCCCTCGTCGGACCGTTGCTTTCTCTCCAATCGAGTTCATCCTCGCCCTCGTCGCT
GTTATCATCATCCCCGCCCTTGTCTACTCCTTCTTCATCGCCATCAAGTGCTCCCCCAATCTCCTCCGCCTCTGGCCGCGGAGATCTGCCAGGCTATCCGGCGCC
GCCGTCACCATGGTGGCTGTGAATCGTATTTCTAATGATGTGGCGGCGGCTGTTATGTACAACAAGGACCAGCACTGTAAGGAAGTCGGTAACGAGTGTCCTGTG
TGCCTATCGGCGTTCGCCGACGGCGAGAAGGTCCGGCAACTCGCCGCCTGTAAACACTCTTTTCATGTAGATTGCATCGACATGTGGCTCTATTCTCACCCCAAT
TGCCCTGTTTGTCGCGCCACCGTCGCCATCGCCGTTAAACGGCCGATTAACAACCGAGCACCGCCGCGGCCAGCGGCTTCTAGGAACGACGATTACCAGCAAGGT
CTGCCGGATGCCGGCAATTTAGTTTGA
Protein sequenceShow/hide protein sequence
MDPITTVMNRPTSPFPSPRRTVAFSPIEFILALVAVIIIPALVYSFFIAIKCSPNLLRLWPRRSARLSGAAVTMVAVNRISNDVAAAVMYNKDQHCKEVGNECPV
CLSAFADGEKVRQLAACKHSFHVDCIDMWLYSHPNCPVCRATVAIAVKRPINNRAPPRPAASRNDDYQQGLPDAGNLV