; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G005530 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G005530
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionVQ domain-containing protein
Genome locationCma_Chr06:2628780..2629112
RNA-Seq ExpressionCmaCh06G005530
SyntenyCmaCh06G005530
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043778.1 protein MKS1-like [Cucumis melo var. makuwa]7.4e-3174.31Show/hide
Query:  SAARNQLPLRLRGPRPPPLTVNKSSTTIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEEC
        +AARNQ   +LRGPRPPPLTVNKSST IFKKST   N R   NRR P+I+YLRSPKIIHVRPEEFKSFVQRLTGN SS+AVVA+S SA+GMI  H  EE 
Subjt:  SAARNQLPLRLRGPRPPPLTVNKSSTTIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEEC

Query:  VSACNYIPS
         SACN IPS
Subjt:  VSACNYIPS

KAG6596645.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.2e-5095.45Show/hide
Query:  MNSAARNQLPLRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEE
        MNSAARNQLPLRLRGPRPPPLTVNKSST IFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSS+AVVAASFSATGMIA HP E 
Subjt:  MNSAARNQLPLRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEE

Query:  CVSACNYIPS
        CVSACNYIPS
Subjt:  CVSACNYIPS

KAG6690545.1 hypothetical protein I3842_10G021000 [Carya illinoinensis]2.6e-1247.66Show/hide
Query:  MNSAARN-----QLPLRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPNR--RDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMI
        MNS A N     Q+  +L+GPRP P+TV+KSS  I K        P P+R  R PVI+YL+SPK+IHVRPEEF   VQRLTGN +     A+S+S +   
Subjt:  MNSAARN-----QLPLRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPNR--RDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMI

Query:  AGHPDEE
           P +E
Subjt:  AGHPDEE

KGN59247.1 hypothetical protein Csa_002000 [Cucumis sativus]2.0e-2870.8Show/hide
Query:  NSAARNQLPLRLRGPRPPPLTVNKSSTT-IFKKSTTTNLRPIPN---RRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHP
        ++AARN    +LRGPRPPPLTVNKSS+T I KKST  N  PI N   RR P+I+YLRSPK+IHVRPEEFKSFVQRLTGN SS+AVVA+S SATGMI    
Subjt:  NSAARNQLPLRLRGPRPPPLTVNKSSTT-IFKKSTTTNLRPIPN---RRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHP

Query:  DEECVSACNYIPS
        DEE VS CN IPS
Subjt:  DEECVSACNYIPS

XP_008443599.1 PREDICTED: protein MKS1-like [Cucumis melo]7.4e-3174.31Show/hide
Query:  SAARNQLPLRLRGPRPPPLTVNKSSTTIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEEC
        +AARNQ   +LRGPRPPPLTVNKSST IFKKST   N R   NRR P+I+YLRSPKIIHVRPEEFKSFVQRLTGN SS+AVVA+S SA+GMI  H  EE 
Subjt:  SAARNQLPLRLRGPRPPPLTVNKSSTTIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEEC

Query:  VSACNYIPS
         SACN IPS
Subjt:  VSACNYIPS

TrEMBL top hitse value%identityAlignment
A0A0A0LEW5 VQ domain-containing protein9.8e-2970.8Show/hide
Query:  NSAARNQLPLRLRGPRPPPLTVNKSSTT-IFKKSTTTNLRPIPN---RRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHP
        ++AARN    +LRGPRPPPLTVNKSS+T I KKST  N  PI N   RR P+I+YLRSPK+IHVRPEEFKSFVQRLTGN SS+AVVA+S SATGMI    
Subjt:  NSAARNQLPLRLRGPRPPPLTVNKSSTT-IFKKSTTTNLRPIPN---RRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHP

Query:  DEECVSACNYIPS
        DEE VS CN IPS
Subjt:  DEECVSACNYIPS

A0A1R3JJT0 VQ motif-containing protein1.7e-1257.69Show/hide
Query:  LRGPRPPPLTVNKSSTTIFKK-STTTNLRPIPNRR----DPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAA
        L+GPRP PL V+ +S+ I KK STT++L+   N R    DPV++YLRSPKIIHVRPEEF S VQRLTG  S+ A  ++
Subjt:  LRGPRPPPLTVNKSSTTIFKK-STTTNLRPIPNRR----DPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAA

A0A1S3B975 protein MKS1-like3.6e-3174.31Show/hide
Query:  SAARNQLPLRLRGPRPPPLTVNKSSTTIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEEC
        +AARNQ   +LRGPRPPPLTVNKSST IFKKST   N R   NRR P+I+YLRSPKIIHVRPEEFKSFVQRLTGN SS+AVVA+S SA+GMI  H  EE 
Subjt:  SAARNQLPLRLRGPRPPPLTVNKSSTTIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEEC

Query:  VSACNYIPS
         SACN IPS
Subjt:  VSACNYIPS

A0A2N9GB07 VQ domain-containing protein4.4e-1355.56Show/hide
Query:  MNSAARNQLPLRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPN--RRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFS
        M+S  R +  L+L+GPRP PLTVNKSST I K       +P+PN  R  PVI+YL+SPK+IHVRPEEF   VQ+LTGN +   V A S S
Subjt:  MNSAARNQLPLRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPN--RRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFS

A0A5D3DP92 Protein MKS1-like3.6e-3174.31Show/hide
Query:  SAARNQLPLRLRGPRPPPLTVNKSSTTIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEEC
        +AARNQ   +LRGPRPPPLTVNKSST IFKKST   N R   NRR P+I+YLRSPKIIHVRPEEFKSFVQRLTGN SS+AVVA+S SA+GMI  H  EE 
Subjt:  SAARNQLPLRLRGPRPPPLTVNKSSTTIFKKST-TTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEEC

Query:  VSACNYIPS
         SACN IPS
Subjt:  VSACNYIPS

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B1.6e-0434.44Show/hide
Query:  GPRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRD--------------PVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSAT
        GP+P PL V   S  I KK       P P                  PV +Y  +P+IIH  P  F + VQRLTG  S+    ++S S+T
Subjt:  GPRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRD--------------PVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSAT

Q8LGD5 Protein MKS12.7e-0742.31Show/hide
Query:  LRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPNR--------RDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSL
        L++ GPRP PL+V+K S  I  K    +  P PNR        R+PV++Y  SPK++H    EF + VQRLTG  S +
Subjt:  LRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPNR--------RDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSL

Q9CA36 VQ motif-containing protein 8, chloroplastic1.7e-0646.88Show/hide
Query:  LRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPN-RRDPVIVYLRSPKIIHVRPEEFKSFVQRLTG
        + G RP  L +   S TI KK+++   +P P+ R  PVI+Y  SPK+IH R E+F + VQRLTG
Subjt:  LRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPN-RRDPVIVYLRSPKIIHVRPEEFKSFVQRLTG

Q9LS54 VQ motif-containing protein 201.0e-0643.33Show/hide
Query:  PRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTG
        P PP L VNK S  I K  + ++       R PVI+Y  +P+IIH  P++F + VQ+LTG
Subjt:  PRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.1e-0534.44Show/hide
Query:  GPRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRD--------------PVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSAT
        GP+P PL V   S  I KK       P P                  PV +Y  +P+IIH  P  F + VQRLTG  S+    ++S S+T
Subjt:  GPRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRD--------------PVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSAT

AT1G21326.1 VQ motif-containing protein2.3e-0636.67Show/hide
Query:  GPRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRD--------------PVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSAT
        GPRP PL V   S  I KK       P P                  PVI+Y  SP+IIH  P  F + VQRLTG  +S +  ++S+S++
Subjt:  GPRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRD--------------PVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSAT

AT1G68450.1 VQ motif-containing protein1.2e-0746.88Show/hide
Query:  LRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPN-RRDPVIVYLRSPKIIHVRPEEFKSFVQRLTG
        + G RP  L +   S TI KK+++   +P P+ R  PVI+Y  SPK+IH R E+F + VQRLTG
Subjt:  LRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPN-RRDPVIVYLRSPKIIHVRPEEFKSFVQRLTG

AT3G18360.1 VQ motif-containing protein7.2e-0843.33Show/hide
Query:  PRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTG
        P PP L VNK S  I K  + ++       R PVI+Y  +P+IIH  P++F + VQ+LTG
Subjt:  PRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTG

AT3G18690.1 MAP kinase substrate 11.9e-0842.31Show/hide
Query:  LRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPNR--------RDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSL
        L++ GPRP PL+V+K S  I  K    +  P PNR        R+PV++Y  SPK++H    EF + VQRLTG  S +
Subjt:  LRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPNR--------RDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCGCCGCCAGGAATCAATTGCCATTGCGACTTCGAGGTCCAAGGCCACCGCCATTGACGGTGAACAAATCCTCCACGACGATTTTCAAGAAATCGACAACGAC
GAATCTGCGTCCGATTCCGAATCGACGCGATCCTGTAATCGTTTACCTTAGATCGCCGAAGATTATCCATGTCCGTCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCA
CTGGAAACGGATCGTCCCTCGCCGTCGTTGCGGCGTCCTTTTCTGCTACTGGAATGATTGCCGGTCATCCTGACGAGGAATGTGTATCGGCCTGCAATTACATTCCGTCG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCCGCCGCCAGGAATCAATTGCCATTGCGACTTCGAGGTCCAAGGCCACCGCCATTGACGGTGAACAAATCCTCCACGACGATTTTCAAGAAATCGACAACGAC
GAATCTGCGTCCGATTCCGAATCGACGCGATCCTGTAATCGTTTACCTTAGATCGCCGAAGATTATCCATGTCCGTCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCA
CTGGAAACGGATCGTCCCTCGCCGTCGTTGCGGCGTCCTTTTCTGCTACTGGAATGATTGCCGGTCATCCTGACGAGGAATGTGTATCGGCCTGCAATTACATTCCGTCG
TAG
Protein sequenceShow/hide protein sequence
MNSAARNQLPLRLRGPRPPPLTVNKSSTTIFKKSTTTNLRPIPNRRDPVIVYLRSPKIIHVRPEEFKSFVQRLTGNGSSLAVVAASFSATGMIAGHPDEECVSACNYIPS