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CmaCh06G006490 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G006490
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr06:3218478..3218828
RNA-Seq ExpressionCmaCh06G006490
SyntenyCmaCh06G006490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577703.1 hypothetical protein SDJN03_25277, partial [Cucurbita argyrosperma subsp. sororia]5.4e-2456.25Show/hide
Query:  MSLNCLSCQLFLQRSDSNK--DLEQNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDW
        M+LNCLSCQL LQR+DS +  D +   Y++ Q +   RSW+GNLSFRPP R   +  R   E++  P+  RRLHS+G ++ G   KEP+L+RS+GMRRDW
Subjt:  MSLNCLSCQLFLQRSDSNK--DLEQNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDW

Query:  SFEDLRAIREEK
        SFEDLRAIREEK
Subjt:  SFEDLRAIREEK
XP_022952265.1 uncharacterized protein LOC111454968 [Cucurbita moschata]1.4e-5695.69Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLEQNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDWSF
        MSLNCLSCQLFLQRSDS+KDLEQ+EYFTDQAKSPDRSW+GNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTG VAFGGPGKEPRLIRSAGMRRDWSF
Subjt:  MSLNCLSCQLFLQRSDSNKDLEQNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDWSF

Query:  EDLRAIREEKESSPNS
        EDLRAIRE+KESSPNS
Subjt:  EDLRAIREEKESSPNS
XP_023007608.1 uncharacterized protein LOC111500186 [Cucurbita maxima]2.4e-2456.25Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLEQ--NEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDW
        M+LNCLSCQL LQR+DS +D +     Y++ Q +   RSW+GNLSFRPP R   +  R   E++  P+  RRLHS+G ++ G   KEP+L+RS+GMRRDW
Subjt:  MSLNCLSCQLFLQRSDSNKDLEQ--NEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDW

Query:  SFEDLRAIREEK
        SFEDLRAIREEK
Subjt:  SFEDLRAIREEK
XP_023539506.1 uncharacterized protein LOC111800149 [Cucurbita pepo subsp. pepo]3.1e-5695.69Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLEQNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDWSF
        MSLNCLSCQLFLQRSDS+KDLEQ+EYFTDQAKSPDRSW+GNLSFRPPTRQNSDGFRVRTENKVAP GHRRLHSTG VAFGGPGKEPRLIRSAGMRRDWSF
Subjt:  MSLNCLSCQLFLQRSDSNKDLEQNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDWSF

Query:  EDLRAIREEKESSPNS
        EDLRAIREEKESSPNS
Subjt:  EDLRAIREEKESSPNS
XP_038905810.1 uncharacterized protein LOC120091761 [Benincasa hispida]1.7e-2561.21Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLE---QNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRD
        MSLNCLSCQ+ LQR+DS +  +   Q  Y +D+  S +RSW+GNLSFRP  R N  GFR   ENKVAP+ HRR      V+FG  GKEPRL+RS+GMRRD
Subjt:  MSLNCLSCQLFLQRSDSNKDLE---QNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRD

Query:  WSFEDLRAIREEKESS
        WSFEDLR IREE+E S
Subjt:  WSFEDLRAIREEKESS
TrEMBL top hitse value%identityAlignment
A0A0A0L198 Uncharacterized protein2.0e-2458.54Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLE---QNEYFTDQAKSPDRSWTGNLSFRPPTRQNSD----GFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAG
        MSLNCLSCQ+ LQR+DS +  +   Q  Y +D+  S +RSW+GNL  RP           GFR   +NKVAP+GHRR      V+FG  GKEPRLIRS+G
Subjt:  MSLNCLSCQLFLQRSDSNKDLE---QNEYFTDQAKSPDRSWTGNLSFRPPTRQNSD----GFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAG

Query:  MRRDWSFEDLRAIREEKESSPNS
        MRRDWSFEDLRAIREEK+ SPNS
Subjt:  MRRDWSFEDLRAIREEKESSPNS
A0A1S3BJN6 uncharacterized protein LOC1034907836.5e-2360Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLE---QNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDG-FRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRR
        MSLNCLSCQL LQR+DS +  +   Q  Y +D+     RSW+GNLS     RQN  G FR   +NKVAP+ HRR      V+FG  GKEPRL+RS+GMRR
Subjt:  MSLNCLSCQLFLQRSDSNKDLE---QNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDG-FRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRR

Query:  DWSFEDLRAIREEKESSPNS
        DWSFEDLR IREEKE SPNS
Subjt:  DWSFEDLRAIREEKESSPNS
A0A5A7UAS3 Uncharacterized protein6.5e-2360Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLE---QNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDG-FRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRR
        MSLNCLSCQL LQR+DS +  +   Q  Y +D+     RSW+GNLS     RQN  G FR   +NKVAP+ HRR      V+FG  GKEPRL+RS+GMRR
Subjt:  MSLNCLSCQLFLQRSDSNKDLE---QNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDG-FRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRR

Query:  DWSFEDLRAIREEKESSPNS
        DWSFEDLR IREEKE SPNS
Subjt:  DWSFEDLRAIREEKESSPNS
A0A6J1GL99 uncharacterized protein LOC1114549686.8e-5795.69Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLEQNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDWSF
        MSLNCLSCQLFLQRSDS+KDLEQ+EYFTDQAKSPDRSW+GNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTG VAFGGPGKEPRLIRSAGMRRDWSF
Subjt:  MSLNCLSCQLFLQRSDSNKDLEQNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDWSF

Query:  EDLRAIREEKESSPNS
        EDLRAIRE+KESSPNS
Subjt:  EDLRAIREEKESSPNS
A0A6J1L834 uncharacterized protein LOC1115001861.2e-2456.25Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLEQ--NEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDW
        M+LNCLSCQL LQR+DS +D +     Y++ Q +   RSW+GNLSFRPP R   +  R   E++  P+  RRLHS+G ++ G   KEP+L+RS+GMRRDW
Subjt:  MSLNCLSCQLFLQRSDSNKDLEQ--NEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDW

Query:  SFEDLRAIREEK
        SFEDLRAIREEK
Subjt:  SFEDLRAIREEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35215.1 unknown protein2.5e-1140.18Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLEQNEYFTDQAKSPDRSWTGNL---SFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRD
        MSLNCL+C + LQR+DS++D+   +         D S+  N    +F    R  S    VR  NK    GHRRL+S   + + G   EP+L+RS+G+RRD
Subjt:  MSLNCLSCQLFLQRSDSNKDLEQNEYFTDQAKSPDRSWTGNL---SFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRD

Query:  WSFEDLRAIREE
        WSFEDL+  +++
Subjt:  WSFEDLRAIREE
AT5G46770.1 unknown protein3.4e-0837.98Show/hide
Query:  MSLNCLSCQLFLQRSDSNKDLE-----------QNEYFTDQAKSP--DRSWTGNLSFRPPTRQNSDGFRVRTE-NKVAPMGHRRLHS-TGTVAFGGPGK-
        MSLNCLSCQ  L R+DSNKD++            N        +P   R+W+GNLS R   +    G  +  +  KV  + H RL    G+     P + 
Subjt:  MSLNCLSCQLFLQRSDSNKDLE-----------QNEYFTDQAKSP--DRSWTGNLSFRPPTRQNSDGFRVRTE-NKVAPMGHRRLHS-TGTVAFGGPGK-

Query:  -EPRLIRSAGMRRDWSFEDLR--AIREEK
         +P+L+RS G+RR+WSFE+LR   + EEK
Subjt:  -EPRLIRSAGMRRDWSFEDLR--AIREEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTGAATTGCCTCTCGTGTCAACTCTTCTTGCAGAGATCGGACTCCAACAAAGACCTCGAGCAGAATGAATACTTCACCGATCAGGCCAAGTCGCCGGAC
AGAAGCTGGACGGGAAACCTCTCGTTTCGCCCTCCCACTCGCCAAAACAGCGACGGGTTTCGGGTCCGGACGGAGAATAAGGTGGCGCCGATGGGCCACCGCCGT
CTTCACAGCACTGGCACCGTCGCTTTCGGCGGCCCTGGTAAGGAGCCGAGGCTGATTAGAAGCGCGGGGATGAGGAGGGATTGGAGCTTTGAGGATCTTCGAGCC
ATCCGAGAGGAAAAGGAATCATCTCCCAATTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTGAATTGCCTCTCGTGTCAACTCTTCTTGCAGAGATCGGACTCCAACAAAGACCTCGAGCAGAATGAATACTTCACCGATCAGGCCAAGTCGCCGGAC
AGAAGCTGGACGGGAAACCTCTCGTTTCGCCCTCCCACTCGCCAAAACAGCGACGGGTTTCGGGTCCGGACGGAGAATAAGGTGGCGCCGATGGGCCACCGCCGT
CTTCACAGCACTGGCACCGTCGCTTTCGGCGGCCCTGGTAAGGAGCCGAGGCTGATTAGAAGCGCGGGGATGAGGAGGGATTGGAGCTTTGAGGATCTTCGAGCC
ATCCGAGAGGAAAAGGAATCATCTCCCAATTCCTAA
Protein sequenceShow/hide protein sequence
MSLNCLSCQLFLQRSDSNKDLEQNEYFTDQAKSPDRSWTGNLSFRPPTRQNSDGFRVRTENKVAPMGHRRLHSTGTVAFGGPGKEPRLIRSAGMRRDWSFEDLRA
IREEKESSPNS