; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G007300 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G007300
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptiontranscription initiation factor TFIID subunit 11
Genome locationCma_Chr06:3700155..3703692
RNA-Seq ExpressionCmaCh06G007300
SyntenyCmaCh06G007300
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0051123 - RNA polymerase II preinitiation complex assembly (biological process)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR006809 - TAFII28-like protein domain
IPR009072 - Histone-fold
IPR045127 - Transcription initiation factor TFIID subunit 11-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596814.1 Transcription initiation factor TFIID subunit 11, partial [Cucurbita argyrosperma subsp. sororia]6.4e-10696.88Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADA+DLHDGDD+PK +AAAAA NSG+PSASTTSLFVSSSSN+SAAPKTKEDDDEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

KAG7028341.1 Transcription initiation factor TFIID subunit 11 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-10697.32Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADA+DLHDGDD+PK +AAAAATNSG+PSASTTSLFVSSSSN+SAAPKTKEDDDEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

XP_022940909.1 transcription initiation factor TFIID subunit 11 [Cucurbita moschata]3.8e-10696.88Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAAT DADA+DLHDGDD+PK +AAAAATNSG+PSASTTSLFVSSSSN+SAAPKTKEDDDEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

XP_023005534.1 transcription initiation factor TFIID subunit 11 [Cucurbita maxima]9.5e-110100Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

XP_023538856.1 transcription initiation factor TFIID subunit 11 [Cucurbita pepo subsp. pepo]5.8e-10797.33Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAA-ATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEEN
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADA+DLHDGDD+PK+AAAAA ATNSG+PSASTTSLFVSSSSN+SAAPKTKEDDDEEEEEN
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAA-ATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEEN

Query:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPC
        VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPC
Subjt:  VEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPC

Query:  HLREAYRRLKLEGKIPRKSVPRLFR
        HLREAYRRLKLEGKIPRKSVPRLFR
Subjt:  HLREAYRRLKLEGKIPRKSVPRLFR

TrEMBL top hitse value%identityAlignment
A0A0A0L5S4 TAFII28 domain-containing protein1.8e-9389.29Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T V A + ADA DL DGDDDPK  +A+ AT+S  P ASTTS+FVSSSS++S APKTKEDD+EEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERND+G IRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

A0A5D3D798 Transcription initiation factor TFIID subunit 111.0e-9389.73Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T V A   ADA DL DGDDDPK  +A+ AT+S  P  STTS+FVSSSS++SAAPKTKEDD+EEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSG IRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

A0A6J1DFN0 transcription initiation factor TFIID subunit 113.1e-9890.31Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPK---TAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEE
        MKQSKDPFEAAFEEQEESPPNSPSAAD +EIQTNVAA   +DA+D HDGDDDPK    AAAA AT+SG+PSA TTS+FVSSSSN+SAAPKTK+DD+EEEE
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPK---TAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEE

Query:  ENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIR
        ENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERND+G IR
Subjt:  ENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIR

Query:  PCHLREAYRRLKLEGKIPRKSVPRLFR
        PCHLREAYRRLKLEGKIPRKSVPRLFR
Subjt:  PCHLREAYRRLKLEGKIPRKSVPRLFR

A0A6J1FLN4 transcription initiation factor TFIID subunit 111.8e-10696.88Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAAT DADA+DLHDGDD+PK +AAAAATNSG+PSASTTSLFVSSSSN+SAAPKTKEDDDEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

A0A6J1KZI1 transcription initiation factor TFIID subunit 114.6e-110100Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
        MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
        EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH
Subjt:  EVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCH

Query:  LREAYRRLKLEGKIPRKSVPRLFR
        LREAYRRLKLEGKIPRKSVPRLFR
Subjt:  LREAYRRLKLEGKIPRKSVPRLFR

SwissProt top hitse value%identityAlignment
F4HR03 Transcription initiation factor TFIID subunit 11b4.5e-3848Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
        MK SKDPFEAA EEQEESP           ++T      D  A+         KT+  A A N                                     
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPC
        EVE  K  +  DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETARVVM ER +SG IRPC
Subjt:  EVELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPC

Query:  HLREAYRRLKLEGKIPRKSVPRLFR
        H+RE+YRRLKL+GK+P++SV RLFR
Subjt:  HLREAYRRLKLEGKIPRKSVPRLFR

Q5RA91 Transcription initiation factor TFIID subunit 115.8e-1737.2Show/hide
Query:  EAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENVEVELAKFP
        E    ++  + P  P A D   I  +    ADAD           + AA      S   S  TT     SS    AA K K D  E++E+  +V      
Subjt:  EAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENVEVELAKFP

Query:  SSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAYRRL
           D D++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +   ++P H+REA RRL
Subjt:  SSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAYRRL

Query:  KLEGKIP
        K +G+IP
Subjt:  KLEGKIP

Q5U1X0 Transcription initiation factor TFIID subunit 119.9e-1735.07Show/hide
Query:  EAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNIS----AAPKTKEDDDEEEEENVEVEL
        E    E+  + P +P +AD   I        DAD+ +             AAA  S + S   + +  +   + S    AA K K D  +++E+  +V  
Subjt:  EAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNIS----AAPKTKEDDDEEEEENVEVEL

Query:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREA
               D D++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  +   ++P H+REA
Subjt:  AKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREA

Query:  YRRLKLEGKIP
         RRLK +G+IP
Subjt:  YRRLKLEGKIP

Q99JX1 Transcription initiation factor TFIID subunit 111.5e-1736.89Show/hide
Query:  ESPPN---SPSAADDLEIQTNVAATADADAIDL---HDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNIS-AAPKTKEDDDEEEEENVEVELAKFPS
        ESP +    P  +++          AD + I      DGD D K AAA  +       +  T+    +SS ++ AA K K D  +++E+  +V       
Subjt:  ESPPN---SPSAADDLEIQTNVAATADADAIDL---HDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNIS-AAPKTKEDDDEEEEENVEVELAKFPS

Query:  SGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAYRRLK
          D D++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  ++  ++P H+REA RRLK
Subjt:  SGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAYRRLK

Query:  LEGKIP
         +G+IP
Subjt:  LEGKIP

Q9M565 Transcription initiation factor TFIID subunit 111.2e-5455.6Show/hide
Query:  MKQSKDPFEAAF-EEQEESPPNSP-------SAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDD
        MK SKDPFEAA  EEQEESPP SP         ++D  I+ +     D   +D+       K                 TS+ V+ + N     K K++D
Subjt:  MKQSKDPFEAAF-EEQEESPPNSP-------SAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDD

Query:  DEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERND
        DEEEEEN++VEL K+P+S DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETARVVM ER +
Subjt:  DEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERND

Query:  SGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR
        SG IRPCH+RE+YRRLKLEGK+P++SVPRLFR
Subjt:  SGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR

Arabidopsis top hitse value%identityAlignment
AT1G20000.1 TBP-associated factor 11B3.2e-3948Show/hide
Query:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV
        MK SKDPFEAA EEQEESP           ++T      D  A+         KT+  A A N                                     
Subjt:  MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENV

Query:  EVELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPC
        EVE  K  +  DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETARVVM ER +SG IRPC
Subjt:  EVELAKFPSSGDPDKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPC

Query:  HLREAYRRLKLEGKIPRKSVPRLFR
        H+RE+YRRLKL+GK+P++SV RLFR
Subjt:  HLREAYRRLKLEGKIPRKSVPRLFR

AT4G20280.1 TBP-associated factor 118.5e-5655.6Show/hide
Query:  MKQSKDPFEAAF-EEQEESPPNSP-------SAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDD
        MK SKDPFEAA  EEQEESPP SP         ++D  I+ +     D   +D+       K                 TS+ V+ + N     K K++D
Subjt:  MKQSKDPFEAAF-EEQEESPPNSP-------SAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDD

Query:  DEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERND
        DEEEEEN++VEL K+P+S DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKMFVGELVETARVVM ER +
Subjt:  DEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERND

Query:  SGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR
        SG IRPCH+RE+YRRLKLEGK+P++SVPRLFR
Subjt:  SGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATCGAAGGACCCATTTGAAGCGGCGTTTGAGGAGCAGGAGGAATCTCCACCGAACTCCCCCTCCGCTGCCGATGATCTCGAAATTCAGACCAACGTT
GCTGCCACCGCCGACGCCGACGCTATTGATTTGCACGATGGTGACGATGATCCAAAAACCGCCGCCGCCGCCGCCGCCACAAATTCCGGTGTTCCTTCTGCATCC
ACTACTTCTTTGTTTGTTTCGTCTTCCTCCAATATCTCTGCCGCCCCTAAAACCAAAGAAGACGACGATGAAGAAGAGGAAGAGAATGTCGAAGTGGAGCTCGCT
AAATTCCCCTCGAGCGGCGATCCAGATAAGATGGCGAAGATGCAAGCCATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTACGAGTCCTTTCGCAGAGCT
GGATTTCAGAAAGCTAATATGAAAAGGCTATTAGCAAGCATCTCGGGAACACAGAAGATTTCTGTACCAATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTC
GTTGGTGAACTCGTAGAAACGGCTAGAGTAGTTATGACTGAGCGGAATGATTCTGGAGCTATCAGGCCATGCCATCTCCGAGAAGCGTATAGAAGACTAAAGCTT
GAAGGTAAGATTCCTAGGAAATCAGTGCCTAGACTCTTTCGCTAA
mRNA sequenceShow/hide mRNA sequence
TAGTCGAAATTGTTCCATGAAACATTTCAAAATTGGCACCAAATCAGGTTAGTTCATCGCACAAAAGCGATCAATTCGGAGAGTATTTCCACAAAAAAAATGAAG
CAATCGAAGGACCCATTTGAAGCGGCGTTTGAGGAGCAGGAGGAATCTCCACCGAACTCCCCCTCCGCTGCCGATGATCTCGAAATTCAGACCAACGTTGCTGCC
ACCGCCGACGCCGACGCTATTGATTTGCACGATGGTGACGATGATCCAAAAACCGCCGCCGCCGCCGCCGCCACAAATTCCGGTGTTCCTTCTGCATCCACTACT
TCTTTGTTTGTTTCGTCTTCCTCCAATATCTCTGCCGCCCCTAAAACCAAAGAAGACGACGATGAAGAAGAGGAAGAGAATGTCGAAGTGGAGCTCGCTAAATTC
CCCTCGAGCGGCGATCCAGATAAGATGGCGAAGATGCAAGCCATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTACGAGTCCTTTCGCAGAGCTGGATTT
CAGAAAGCTAATATGAAAAGGCTATTAGCAAGCATCTCGGGAACACAGAAGATTTCTGTACCAATGACGATCGTAGTGTCTGGGATAGCAAAGATGTTCGTTGGT
GAACTCGTAGAAACGGCTAGAGTAGTTATGACTGAGCGGAATGATTCTGGAGCTATCAGGCCATGCCATCTCCGAGAAGCGTATAGAAGACTAAAGCTTGAAGGT
AAGATTCCTAGGAAATCAGTGCCTAGACTCTTTCGCTAATCGGTCTATTCAATTTCTAGTCTTTGTATTAGGAGTTTTTGTAGGCAAAACATCTCATCATATATA
TTCCTAAAGTTTCTAACATATTTTTGTATAAAATTGGGTTGTTTATGTATCAAACTTCTGAAAAGGAGGAAAACTCTGCACTTGAATTGAACTTGTACATTTTAA
ACATTAGAACACATTTAATAATATTATATGATGATATGCTATGTTCATAGGCG
Protein sequenceShow/hide protein sequence
MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAAATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENVEVELA
KFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDSGAIRPCHLREAYRRLKL
EGKIPRKSVPRLFR