CuGenDBv2

Gene ID	CmaCh06G007760
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like
Genome location	Cma_Chr06:4007233..4013975
RNA-Seq Expression	CmaCh06G007760
Synteny	CmaCh06G007760
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR038863 - Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004147198.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus]

2.3e-63

92.91

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAG+L+NLGSK+LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGEAEA
        KAS+IPFAPKVYPYDNLRVELGG+ EA
Subjt:  KASRIPFAPKVYPYDNLRVELGGEAEA

XP_022950674.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata]

5.2e-68

99.22

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGEAEAES
        KASRIPFAPKVYPYDNLRVELGGEAEAE+
Subjt:  KASRIPFAPKVYPYDNLRVELGGEAEAES

XP_022965223.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima]

8.7e-63

92.91

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAGRLSNLGS++LGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGEAEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASRIPFAPKVYPYDNLRVELGGEAEA

XP_023005602.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita maxima]

8.1e-69

100

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGEAEAESA
        KASRIPFAPKVYPYDNLRVELGGEAEAESA
Subjt:  KASRIPFAPKVYPYDNLRVELGGEAEAESA

XP_038903151.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida]

4.6e-64

94.49

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAGRLSNL S++LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGEAEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASRIPFAPKVYPYDNLRVELGGEAEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5J8 Uncharacterized protein

1.1e-63

92.91

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAG+L+NLGSK+LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGEAEA
        KAS+IPFAPKVYPYDNLRVELGG+ EA
Subjt:  KASRIPFAPKVYPYDNLRVELGGEAEA

A0A1S3BK37 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

1.1e-63

92.91

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAG+L+NLGSK+LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTPFPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGEAEA
        KAS+IPFAPKVYPYDNLRVELGG+ EA
Subjt:  KASRIPFAPKVYPYDNLRVELGGEAEA

A0A6J1GGJ2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like

2.5e-68

99.22

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGEAEAES
        KASRIPFAPKVYPYDNLRVELGGEAEAE+
Subjt:  KASRIPFAPKVYPYDNLRVELGGEAEAES

A0A6J1HN93 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

4.2e-63

92.91

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAGRLSNLGS++LGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGEAEA
        KAS+IPFAPKVYPYDNLRVELGGE EA
Subjt:  KASRIPFAPKVYPYDNLRVELGGEAEA

A0A6J1KTK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like

3.9e-69

100

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGEAEAESA
        KASRIPFAPKVYPYDNLRVELGGEAEAESA
Subjt:  KASRIPFAPKVYPYDNLRVELGGEAEAESA

SwissProt top hits

e value

%identity

Alignment

Q9FGK0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial

2.8e-56

81.45

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAGRLS + S+++GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL VNDEL+WDNGT FPEPCIDRIADTVGKYEAL WL GGLGFF  LGLLAV ND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGE
        KAS++PF P+VYPYDNLRVELGGE
Subjt:  KASRIPFAPKVYPYDNLRVELGGE

Arabidopsis top hits

e value

%identity

Alignment

AT5G47570.1 unknown protein

2.0e-57

81.45

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Query:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND
        MAGRLS + S+++GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL VNDEL+WDNGT FPEPCIDRIADTVGKYEAL WL GGLGFF  LGLLAV ND
Subjt:  MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWND

Query:  KASRIPFAPKVYPYDNLRVELGGE
        KAS++PF P+VYPYDNLRVELGGE
Subjt:  KASRIPFAPKVYPYDNLRVELGGE

Sequences

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CDS sequence

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ATGGCAGGCAGACTGAGCAATTTGGGTTCAAAGGTCCTTGGCGGAAATGGCGTTGTTGGTCGCTCAATCGCTTCATCTCTTCGCCTTCGCTCCGGCATGGGCCTTCCCGT
TGGAAAACACATCGTCCCCGATAAGCCCCTTCCTGTAAACGACGAACTGGTTTGGGATAATGGAACTCCTTTTCCTGAGCCCTGTATTGATCGCATTGCAGATACGGTTG
GGAAGTACGAAGCCTTGGGTTGGTTATGTGGGGGATTGGGATTCTTTGCATCTCTGGGATTGTTGGCTGTGTGGAACGACAAAGCGTCTAGGATTCCATTTGCGCCGAAA
GTGTATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAAGCAGAAGCAGAATCAGCATAG

mRNA sequence

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AAAAAAAATCCAAGAAACTTAGATTGAGGCTAATTTTCGAAGGGCATCTATTTCAGCCCTCGTACGGTCGTGCTCTGGTTGTTCTGAAGAATAAGAACTCGAAAGAAGGA
ACAGACGACGCCCTGGGATTTGGAAGAGGGAAAATCACCGAAAATGGCAGGCAGACTGAGCAATTTGGGTTCAAAGGTCCTTGGCGGAAATGGCGTTGTTGGTCGCTCAA
TCGCTTCATCTCTTCGCCTTCGCTCCGGCATGGGCCTTCCCGTTGGAAAACACATCGTCCCCGATAAGCCCCTTCCTGTAAACGACGAACTGGTTTGGGATAATGGAACT
CCTTTTCCTGAGCCCTGTATTGATCGCATTGCAGATACGGTTGGGAAGTACGAAGCCTTGGGTTGGTTATGTGGGGGATTGGGATTCTTTGCATCTCTGGGATTGTTGGC
TGTGTGGAACGACAAAGCGTCTAGGATTCCATTTGCGCCGAAAGTGTATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAAGCAGAAGCAGAATCAGCATAGATAG
ACAAACCTGAGGTGGAATGATATGACCATTTTGGTTTGGTATTGTTTCTTGAATTTGGTGTATGCATCAAATCAAAATAATGGATTTTGTAAATGGACTAAATTTGAACT
TTTGATATTATTATTATTACTTTGAAAATAAAAGTGGCATATGGCGATCTGTCATATTTATGTGTCATATTTATGTGTCCTAAGCGTTTGATTTTGTAATATTGTAATTT
AAAGATTGGAAAGGTAGCACCAAAGAAGAGCTTCAAATTCCATAATTCAAAAGTCTAATTTTGCTGCCCAAAAAAAGGATCAAGACTTCTG

Protein sequence

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MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPK
VYPYDNLRVELGGEAEAESA

CmaCh06G007760 (gene) of Cucurbita maxima (Rimu) v1.1 genome