; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G008090 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G008090
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr06:4285727..4289313
RNA-Seq ExpressionCmaCh06G008090
SyntenyCmaCh06G008090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596882.1 hypothetical protein SDJN03_10062, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1664.76Show/hide
Query:  SSSAAAPPRPSTPPPVASPAMSPPAASPPPINSSPPMAASPPCMDMSSVSVPMPDSPPSLPSP----SAGFSIHHSGSRRALRRCWVAWPSSLPIYAFFF
        S +AAA PRPSTP PVASPAMSPPAASPP I SSPPMAASPP M MS VSVPMPDSPPSLPSP    SAGFSIHH G +  L          L      F
Subjt:  SSSAAAPPRPSTPPPVASPAMSPPAASPPPINSSPPMAASPPCMDMSSVSVPMPDSPPSLPSP----SAGFSIHHSGSRRALRRCWVAWPSSLPIYAFFF

Query:  LFFTF
         F  F
Subjt:  LFFTF
XP_038903480.1 classical arabinogalactan protein 9-like [Benincasa hispida]8.3e-0446.02Show/hide
Query:  PCSSSAAAPPRPSTPPPVASPAMS-PPAASPPPINSS---------PPMAASPPCMDMSSVSVPMPDSPPSLPS------------------------PS
        P  +SAAAPP PS+PPPVA+P  + PPAASPPP  S+         PPM ASPP M+ S    PMPDSPPS P                         PS
Subjt:  PCSSSAAAPPRPSTPPPVASPAMS-PPAASPPPINSS---------PPMAASPPCMDMSSVSVPMPDSPPSLPS------------------------PS

Query:  AGFSIHHSGSRRA
        AGFSIH  G + A
Subjt:  AGFSIHHSGSRRA
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGTGAGTACCTGCAGAAGAAGTTCATCATGAGCTCAAATCCATACTTGCGGATCCAATCACACACAAGTAATCAAGCAGTTTCAATAACACGTGAACAA
TCACAACCCGCTTTTAAGCAAGCCAAGAGGGAGCTGTCAAATCTTTGGCAGAACAATTACCCCCATTACATCCCCAAGCTTAACTCGAGGTTTTCTCGGCGGTTT
CACCTCCTCAGGCTGAGCATCAGATTCCACTACTCCTTCTACTTCAGCCTCGGGAGCTTCTTCCGCCGCTTCCGCTTCAGAATTTACCTCAGCTCTCACAACAAA
AGTCCGTTTCACCGGCCCCGCAACGGCATGAAAACGAAAGCCGGTTACCATAAATTGCGGAACGAAACCCTAATTTCCTCGGCGCGCATTGGTTGGGGGTTCTCG
GAATGGAAAACACGGCCTAGAAACAAGAAGAAAATTGAGAAGGAAAATGAAGTAGAGAAGGGGAGTATTGAGAGAAAGGAAAAGGCGAAAGGAGGAAGTGTACCT
GAGGGAGAATCTTGGAGGCCATTGATGAAGGAGTTGGAACTTCTGAAGCGGAGAAATGAAACAGAATTAGAGATGAAGGGAGAGAATCATGGCAGTAACAATGGC
GACCGCACGTGCCATGCTCGTGCTCGCCCTCTCTTTTTTTGCCCTTTCCTCCTCCGCCATTGCTCAAGGTCCCTCCCCTGCTCCTCTTCCGCTGCCGCCCCGCCG
CGTCCATCAACCCCACCTCCGGTTGCATCACCCGCCATGTCCCCACCGGCTGCCTCACCTCCACCAATCAACTCATCTCCCCCGATGGCGGCTTCTCCGCCGTGC
ATGGATATGAGCTCAGTCTCAGTCCCAATGCCCGACAGCCCACCATCACTTCCAAGCCCAAGCGCGGGATTTTCCATACACCACAGCGGCTCAAGGCGGGCCTTG
CGGCGGTGTTGGGTGGCATGGCCGTCGTCCTTACCCATTTATGCATTCTTTTTTCTTTTCTTTACTTTCATTAGCACCATGAGTGATTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGTGAGTACCTGCAGAAGAAGTTCATCATGAGCTCAAATCCATACTTGCGGATCCAATCACACACAAGTAATCAAGCAGTTTCAATAACACGTGAACAA
TCACAACCCGCTTTTAAGCAAGCCAAGAGGGAGCTGTCAAATCTTTGGCAGAACAATTACCCCCATTACATCCCCAAGCTTAACTCGAGGTTTTCTCGGCGGTTT
CACCTCCTCAGGCTGAGCATCAGATTCCACTACTCCTTCTACTTCAGCCTCGGGAGCTTCTTCCGCCGCTTCCGCTTCAGAATTTACCTCAGCTCTCACAACAAA
AGTCCGTTTCACCGGCCCCGCAACGGCATGAAAACGAAAGCCGGTTACCATAAATTGCGGAACGAAACCCTAATTTCCTCGGCGCGCATTGGTTGGGGGTTCTCG
GAATGGAAAACACGGCCTAGAAACAAGAAGAAAATTGAGAAGGAAAATGAAGTAGAGAAGGGGAGTATTGAGAGAAAGGAAAAGGCGAAAGGAGGAAGTGTACCT
GAGGGAGAATCTTGGAGGCCATTGATGAAGGAGTTGGAACTTCTGAAGCGGAGAAATGAAACAGAATTAGAGATGAAGGGAGAGAATCATGGCAGTAACAATGGC
GACCGCACGTGCCATGCTCGTGCTCGCCCTCTCTTTTTTTGCCCTTTCCTCCTCCGCCATTGCTCAAGGTCCCTCCCCTGCTCCTCTTCCGCTGCCGCCCCGCCG
CGTCCATCAACCCCACCTCCGGTTGCATCACCCGCCATGTCCCCACCGGCTGCCTCACCTCCACCAATCAACTCATCTCCCCCGATGGCGGCTTCTCCGCCGTGC
ATGGATATGAGCTCAGTCTCAGTCCCAATGCCCGACAGCCCACCATCACTTCCAAGCCCAAGCGCGGGATTTTCCATACACCACAGCGGCTCAAGGCGGGCCTTG
CGGCGGTGTTGGGTGGCATGGCCGTCGTCCTTACCCATTTATGCATTCTTTTTTCTTTTCTTTACTTTCATTAGCACCATGAGTGATTTGTAG
Protein sequenceShow/hide protein sequence
MFGEYLQKKFIMSSNPYLRIQSHTSNQAVSITREQSQPAFKQAKRELSNLWQNNYPHYIPKLNSRFSRRFHLLRLSIRFHYSFYFSLGSFFRRFRFRIYLSSHNK
SPFHRPRNGMKTKAGYHKLRNETLISSARIGWGFSEWKTRPRNKKKIEKENEVEKGSIERKEKAKGGSVPEGESWRPLMKELELLKRRNETELEMKGENHGSNNG
DRTCHARARPLFFCPFLLRHCSRSLPCSSSAAAPPRPSTPPPVASPAMSPPAASPPPINSSPPMAASPPCMDMSSVSVPMPDSPPSLPSPSAGFSIHHSGSRRAL
RRCWVAWPSSLPIYAFFFLFFTFISTMSDL