; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G009130 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G009130
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionhomeobox protein knotted-1-like 1
Genome locationCma_Chr06:6003316..6004277
RNA-Seq ExpressionCmaCh06G009130
SyntenyCmaCh06G009130
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005540 - KNOX1
IPR005541 - KNOX2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596993.1 Homeobox protein knotted-1-like 2, partial [Cucurbita argyrosperma subsp. sororia]5.1e-6794.08Show/hide
Query:  MDSGNHSTDQP----LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA
        MDSGNHSTDQP    LQLK EEEDDGVD G+ LRRRISSHPLYGLLL+THLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA
Subjt:  MDSGNHSTDQP----LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA

Query:  LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
        LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
Subjt:  LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK

KAG7028461.1 Homeobox protein knotted-1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]4.6e-6895.39Show/hide
Query:  MDSGNHSTDQP----LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA
        MDSGNHSTDQP    LQLK EEEDDGVD GEMLRRRISSHPLYGLLL+THLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA
Subjt:  MDSGNHSTDQP----LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA

Query:  LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
        LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
Subjt:  LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK

XP_022945492.1 homeobox protein KNOX3 [Cucurbita moschata]1.9e-6693.42Show/hide
Query:  MDSGNHSTDQP----LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA
        MDSGNHSTDQP    LQLK EEEDDGVD G+ LRRRISSHPLYGLLL+THLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA
Subjt:  MDSGNHSTDQP----LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA

Query:  LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
        LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSD K
Subjt:  LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK

XP_022974318.1 homeobox protein KNOX3-like [Cucurbita maxima]8.1e-73100Show/hide
Query:  MDSGNHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKL
        MDSGNHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKL
Subjt:  MDSGNHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKL

Query:  KEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
        KEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
Subjt:  KEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK

XP_023539616.1 homeobox protein KNOX3 [Cucurbita pepo subsp. pepo]5.1e-6794.08Show/hide
Query:  MDSGNHSTDQP----LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA
        MDSGNHSTDQP    LQLK EEEDDGVD G+MLR RISSHPLYGLLL+THLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA
Subjt:  MDSGNHSTDQP----LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA

Query:  LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
        LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
Subjt:  LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK

TrEMBL top hitse value%identityAlignment
A0A444Z1E2 Uncharacterized protein9.4e-2755.97Show/hide
Query:  KQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAF
        ++EE+ D     E+L+RRIS+HPLYGLL++ HL CLKVG I  LDR  L +D M+  + +   LN  +QSELD FME+YC AL KLKEAMEE Q KSMAF
Subjt:  KQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAF

Query:  INSMNSQLRELTATGAAAKKPTAASSSAATSDTK
        IN+M+SQLRELT    A   P+ AS ++++SD K
Subjt:  INSMNSQLRELTATGAAAKKPTAASSSAATSDTK

A0A6J1C8K6 protein KNATM6.9e-4671.43Show/hide
Query:  DSGNHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLK
        D  N +  +   L+ EEE +G + GE+LRRRISSHPLYGLL++THLNCLKVGGIG++DRGYLA D+++ ++N IRCLNTLNQSELDRFME+YC+ALSKLK
Subjt:  DSGNHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLK

Query:  EAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSS
        EAMEESQ+KSMAFINSM+SQLRE+ AT AAA KPT +SSS
Subjt:  EAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSS

A0A6J1G133 homeobox protein KNOX39.3e-6793.42Show/hide
Query:  MDSGNHSTDQP----LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA
        MDSGNHSTDQP    LQLK EEEDDGVD G+ LRRRISSHPLYGLLL+THLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA
Subjt:  MDSGNHSTDQP----LQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYA

Query:  LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
        LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSD K
Subjt:  LSKLKEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK

A0A6J1IFV6 homeobox protein KNOX3-like3.9e-73100Show/hide
Query:  MDSGNHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKL
        MDSGNHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKL
Subjt:  MDSGNHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKL

Query:  KEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
        KEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK
Subjt:  KEAMEESQLKSMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK

A0A6P4DE57 homeobox protein knotted-1-like 18.0e-2654.48Show/hide
Query:  KQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAF
        ++EE+ D     E+L+RRIS+HPLYGLL++ HL CLKVG I  LDR  L +D ++  + +   LN  +QSELD FME+YC AL KLK+AMEE Q KSMAF
Subjt:  KQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAF

Query:  INSMNSQLRELTATGAAAKKPTAASSSAATSDTK
        IN+M+SQLRELT    A   P+ AS ++++SD K
Subjt:  INSMNSQLRELTATGAAAKKPTAASSSAATSDTK

SwissProt top hitse value%identityAlignment
F4HXU3 Protein KNATM1.5e-0556.25Show/hide
Query:  NHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKV
        NHS      LK+E +++     E+L++RISSHPLYGLLL +HLNCLKV
Subjt:  NHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKV

O65034 Homeobox protein knotted-1-like 122.0e-0531.25Show/hide
Query:  GVDGGEM-------LRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLA----MDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLK
        G  GGE+       ++ +I +HP Y  LL  +L+C KVG   E+     A    +D      ++ R        ELD+FME+YC  L+K +E +     +
Subjt:  GVDGGEM-------LRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLA----MDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLK

Query:  SMAFINSMNSQL
        +M F+  + SQL
Subjt:  SMAFINSMNSQL

O80416 Homeobox protein knotted-1-like 122.0e-0531.25Show/hide
Query:  GVDGGEM-------LRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLA----MDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLK
        G  GGE+       ++ +I +HP Y  LL  +L+C KVG   E+     A    +D      ++ R        ELD+FME+YC  L+K +E +     +
Subjt:  GVDGGEM-------LRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLA----MDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLK

Query:  SMAFINSMNSQL
        +M F+  + SQL
Subjt:  SMAFINSMNSQL

P46639 Homeobox protein knotted-1-like 13.4e-0531.43Show/hide
Query:  QLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGE-LDRGYLAMDLMEHRENEIRCLNTLNQS----ELDRFMESYCYALSKLKEAMEES
        Q      +D V   E ++ +I +HP Y  LLQ +L+C K+G   + +DR   A    E R+   R   +++ S    ELD+FME+YC  L K +E +   
Subjt:  QLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGE-LDRGYLAMDLMEHRENEIRCLNTLNQS----ELDRFMESYCYALSKLKEAMEES

Query:  QLKSMAFINSMNSQLRELTATGA-AAKKPTAASSSAATSD
          ++M FI  + SQL  L  +       P   S +  +SD
Subjt:  QLKSMAFINSMNSQLRELTATGA-AAKKPTAASSSAATSD

P46640 Homeobox protein knotted-1-like 26.8e-0637.6Show/hide
Query:  MLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLME-HRENEI--RCLNTLN----QSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNS
        +++ +I+SHPLY  LLQT+++C KVG   E     +A  L E  REN +  R +  L+      ELD FME+YC  L K K  +     ++  FIN +  
Subjt:  MLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLME-HRENEI--RCLNTLN----QSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNS

Query:  QLRELTATGAAAKKPTAASSSAATS
        QL+ L    A+A   TA S   A S
Subjt:  QLRELTATGAAAKKPTAASSSAATS

Arabidopsis top hitse value%identityAlignment
AT1G14760.1 KNOX Arabidopsis thaliana meinox1.1e-0656.25Show/hide
Query:  NHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKV
        NHS      LK+E +++     E+L++RISSHPLYGLLL +HLNCLKV
Subjt:  NHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKV

AT1G14760.2 KNOX Arabidopsis thaliana meinox4.1e-1440.8Show/hide
Query:  NHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYL---AMDL-MEHRENEIRCLNTLNQSELDRFMESYCYALSKL
        NHS      LK+E +++     E+L++RISSHPLYGLLL +HLNCLKV   G+ D   +   A DL +          +    SELD+FME+YC  L +L
Subjt:  NHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYL---AMDL-MEHRENEIRCLNTLNQSELDRFMESYCYALSKL

Query:  KEAMEESQLKSMAFINSMNSQLREL
        KEAME+   ++  F++++ +QL ++
Subjt:  KEAMEESQLKSMAFINSMNSQLREL

AT1G14760.3 KNOX Arabidopsis thaliana meinox5.7e-0832.23Show/hide
Query:  NHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAM
        NHS      LK+E +++     E+L++RISSHPLYGLLL +HLNCLK                                       E+YC  L +LKEAM
Subjt:  NHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAM

Query:  EESQLKSMAFINSMNSQLREL
        E+   ++  F++++ +QL ++
Subjt:  EESQLKSMAFINSMNSQLREL

AT1G23380.1 KNOTTED1-like homeobox gene 62.4e-0631.37Show/hide
Query:  MLRRRISSHPLYGLLLQTHLNCLKVGGIGE----LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLR
        +++ +I+ HP Y  LLQ +++C KVG   E    L+      D+ +       C       ELD FME+YC  L K K  +     ++  F+N +  QLR
Subjt:  MLRRRISSHPLYGLLLQTHLNCLKVGGIGE----LDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNSQLR

Query:  EL
         L
Subjt:  EL

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 24.8e-0737.6Show/hide
Query:  MLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLME-HRENEI--RCLNTLN----QSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNS
        +++ +I+SHPLY  LLQT+++C KVG   E     +A  L E  REN +  R +  L+      ELD FME+YC  L K K  +     ++  FIN +  
Subjt:  MLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLME-HRENEI--RCLNTLN----QSELDRFMESYCYALSKLKEAMEESQLKSMAFINSMNS

Query:  QLRELTATGAAAKKPTAASSSAATS
        QL+ L    A+A   TA S   A S
Subjt:  QLRELTATGAAAKKPTAASSSAATS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCTGGGAACCATTCTACAGACCAACCACTCCAACTAAAACAGGAGGAAGAAGACGATGGCGTGGACGGAGGAGAAATGCTGCGTAGGAGAATTTCTAGCCACCC
CTTATATGGCCTCTTACTTCAGACTCATCTCAACTGTTTGAAGGTTGGAGGAATTGGTGAATTGGACCGAGGTTATTTAGCTATGGATTTGATGGAACACCGAGAAAACG
AGATCAGATGCTTGAATACGCTTAACCAATCGGAGCTAGATCGCTTCATGGAAAGCTATTGCTATGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAA
TCGATGGCATTCATAAACAGCATGAACTCGCAATTAAGGGAGCTAACGGCGACGGGTGCAGCAGCCAAGAAACCCACCGCCGCCTCATCTTCTGCTGCTACTAGCGACAC
AAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCTGGGAACCATTCTACAGACCAACCACTCCAACTAAAACAGGAGGAAGAAGACGATGGCGTGGACGGAGGAGAAATGCTGCGTAGGAGAATTTCTAGCCACCC
CTTATATGGCCTCTTACTTCAGACTCATCTCAACTGTTTGAAGGTTGGAGGAATTGGTGAATTGGACCGAGGTTATTTAGCTATGGATTTGATGGAACACCGAGAAAACG
AGATCAGATGCTTGAATACGCTTAACCAATCGGAGCTAGATCGCTTCATGGAAAGCTATTGCTATGCATTGAGCAAGCTGAAAGAAGCAATGGAGGAATCTCAGTTAAAA
TCGATGGCATTCATAAACAGCATGAACTCGCAATTAAGGGAGCTAACGGCGACGGGTGCAGCAGCCAAGAAACCCACCGCCGCCTCATCTTCTGCTGCTACTAGCGACAC
AAAGTGA
Protein sequenceShow/hide protein sequence
MDSGNHSTDQPLQLKQEEEDDGVDGGEMLRRRISSHPLYGLLLQTHLNCLKVGGIGELDRGYLAMDLMEHRENEIRCLNTLNQSELDRFMESYCYALSKLKEAMEESQLK
SMAFINSMNSQLRELTATGAAAKKPTAASSSAATSDTK