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CmaCh06G009170 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G009170
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionAuxin-responsive protein
Genome locationCma_Chr06:6070153..6070717
RNA-Seq ExpressionCmaCh06G009170
SyntenyCmaCh06G009170
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596988.1 Auxin-induced protein 22B, partial [Cucurbita argyrosperma subsp. sororia]8.7e-5396.26Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
        MDS+LSFQNHLNLEAT+LRLGLPG DGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNT LPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD

Query:  LGVYKGY
        LGVYKGY
Subjt:  LGVYKGY

XP_022961610.1 auxin-responsive protein IAA4-like [Cucurbita moschata]3.0e-5397.2Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
        MDS+LSFQNHLNLEAT+LRLGLPG DGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD

Query:  LGVYKGY
        LGVYKGY
Subjt:  LGVYKGY

XP_022974309.1 auxin-induced protein 22B-like [Cucurbita maxima]1.2e-54100Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
        MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD

Query:  LGVYKGY
        LGVYKGY
Subjt:  LGVYKGY

XP_022975486.1 auxin-induced protein 22B-like [Cucurbita maxima]1.2e-54100Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
        MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD

Query:  LGVYKGY
        LGVYKGY
Subjt:  LGVYKGY

XP_023539614.1 auxin-responsive protein IAA4-like [Cucurbita pepo subsp. pepo]5.1e-5397.2Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
        MDSQLSFQNHLNLE T+LRLGLPGIDGSAD+SCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD

Query:  LGVYKGY
        LGVYKGY
Subjt:  LGVYKGY

TrEMBL top hitse value%identityAlignment
A0A6J1EUG2 Auxin-responsive protein3.4e-4282.88Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGI----DGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYL
        MDS+ S    LNL AT+LRLGLPG     DGSADNS GVRTNKRNLQN SAPPPKSQVVGWPPIRSFRKNTLLPKKTE+TTAAEGGGIYVKVSMDGAPYL
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGI----DGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYL

Query:  RKVDLGVYKGY
        RK+D+G+YKGY
Subjt:  RKVDLGVYKGY

A0A6J1HCQ7 Auxin-responsive protein1.5e-5397.2Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
        MDS+LSFQNHLNLEAT+LRLGLPG DGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD

Query:  LGVYKGY
        LGVYKGY
Subjt:  LGVYKGY

A0A6J1IED3 Auxin-responsive protein5.9e-55100Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
        MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD

Query:  LGVYKGY
        LGVYKGY
Subjt:  LGVYKGY

A0A6J1IH86 Auxin-responsive protein5.9e-55100Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
        MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVD

Query:  LGVYKGY
        LGVYKGY
Subjt:  LGVYKGY

A0A6J1KIN8 Auxin-responsive protein2.2e-4182.88Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGI----DGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYL
        MDS+LS    LNL AT+LRLGLPG     DGSADNS GVRT KR LQN SAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYL
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGI----DGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYL

Query:  RKVDLGVYKGY
        RK+D+G+YKGY
Subjt:  RKVDLGVYKGY

SwissProt top hitse value%identityAlignment
O24542 Auxin-induced protein 22D4.4e-2349.58Show/hide
Query:  SFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRN-----------------LQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKV
        S++  LNL+AT+LRLGLPG D   +     R+NKR+                  +++  PP K+QVVGWPPIRS+RKN +  KK E    +EG G+YVKV
Subjt:  SFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRN-----------------LQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKV

Query:  SMDGAPYLRKVDLGVYKGY
        SM GAPYLRK+DL VYK Y
Subjt:  SMDGAPYLRKVDLGVYKGY

O24543 Auxin-induced protein 22E3.5e-2046.21Show/hide
Query:  SFQNHLNLEATQLRLGLPGID---------GSADNSCGVRTN--------KRNLQNHSA-------------PPPKSQVVGWPPIRSFRKNTLLPKKTEA
        S++  LNL AT+LRLGLPG D         GS   S   R++        K N+ + S+              P K QVVGWPPIRSFRKN+L  KK E 
Subjt:  SFQNHLNLEATQLRLGLPGID---------GSADNSCGVRTN--------KRNLQNHSA-------------PPPKSQVVGWPPIRSFRKNTLLPKKTEA

Query:  TTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
            +G G+Y+KVSM GAPYLRK+DL VYK Y
Subjt:  TTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY

P32294 Auxin-induced protein 22B2.3e-2448.85Show/hide
Query:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNS----CGVRTNKRNL----------------QNH----SAPPPKSQVVGWPPIRSFRKNTLLPKKTEAT
        M+S++ F++ LNL+AT+LRLGLPG +   DN+      +R NKR +                Q H    SAPPPK+++VGWPPIRS+RKN++        
Subjt:  MDSQLSFQNHLNLEATQLRLGLPGIDGSADNS----CGVRTNKRNL----------------QNH----SAPPPKSQVVGWPPIRSFRKNTLLPKKTEAT

Query:  TAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
           EG GI+VKVSMDGAPYLRKVDL VY GY
Subjt:  TAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY

P33077 Auxin-responsive protein IAA41.3e-2253.21Show/hide
Query:  LNLEATQLRLGLPGIDGSADNSCGVRTNKRNL------------QNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRK
        +NL+AT+LRLGLPG + +   SCG ++NKR L            +  +A PPK+Q+VGWPP+RS+RKN +  KK+E    +EG G YVKVSMDGAPYLRK
Subjt:  LNLEATQLRLGLPGIDGSADNSCGVRTNKRNL------------QNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRK

Query:  VDLGVYKGY
        +DL +YK Y
Subjt:  VDLGVYKGY

Q38822 Auxin-responsive protein IAA37.5e-2350.88Show/hide
Query:  LNLEATQLRLGLPGIDGSADN----SCGVRTNKRNL-------------QNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGA
        +NL+ T+LRLGLPG D   +     SC    NKR L             +  ++PP K+Q+VGWPP+RS+RKN +  KK E  +  EG GIYVKVSMDGA
Subjt:  LNLEATQLRLGLPGIDGSADN----SCGVRTNKRNL-------------QNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGA

Query:  PYLRKVDLGVYKGY
        PYLRK+DL  YKGY
Subjt:  PYLRKVDLGVYKGY

Arabidopsis top hitse value%identityAlignment
AT1G04240.1 AUX/IAA transcriptional regulator family protein5.3e-2450.88Show/hide
Query:  LNLEATQLRLGLPGIDGSADN----SCGVRTNKRNL-------------QNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGA
        +NL+ T+LRLGLPG D   +     SC    NKR L             +  ++PP K+Q+VGWPP+RS+RKN +  KK E  +  EG GIYVKVSMDGA
Subjt:  LNLEATQLRLGLPGIDGSADN----SCGVRTNKRNL-------------QNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGA

Query:  PYLRKVDLGVYKGY
        PYLRK+DL  YKGY
Subjt:  PYLRKVDLGVYKGY

AT3G23030.1 indole-3-acetic acid inducible 21.3e-1747.22Show/hide
Query:  NHLNLEATQLRLGLPG----IDGSADNSCGVRTNKRNL-----QNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKV
        N LNL+ T+L LGLPG    I    + SC    NKR       +  S PP K+Q+VGWPP+RS RKN                  YVKVSMDGAPYLRK+
Subjt:  NHLNLEATQLRLGLPG----IDGSADNSCGVRTNKRNL-----QNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKV

Query:  DLGVYKGY
        DL  YK Y
Subjt:  DLGVYKGY

AT4G14550.1 indole-3-acetic acid inducible 146.3e-1749Show/hide
Query:  EATQLRLGL-PGIDGSAD-NSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKT-EATTAAEGGG---IYVKVSMDGAPYLRKVDLGVYKGY
        E   L+L L     G  D N+ G    K  L++ S PP K+QVVGWPP+R++RKN +  +K+ EA  A   GG    +VKVSMDGAPYLRKVDL +Y  Y
Subjt:  EATQLRLGL-PGIDGSAD-NSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKT-EATTAAEGGG---IYVKVSMDGAPYLRKVDLGVYKGY

AT4G14560.1 indole-3-acetic acid inducible2.0e-1850.94Show/hide
Query:  NHLNLEATQLRLGLPGI--DGSADNSCGVRTNKRNLQN----HSAPPP-KSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDL
        N LNL+ T+LRLGLPG   +   + SC VR+N +   N     SAPPP K+Q+VGWPP+RS RKN      +           YVKVSMDGAPYLRK+DL
Subjt:  NHLNLEATQLRLGLPGI--DGSADNSCGVRTNKRNLQN----HSAPPP-KSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDL

Query:  GVYKGY
         +YK Y
Subjt:  GVYKGY

AT5G43700.1 AUX/IAA transcriptional regulator family protein9.1e-2453.21Show/hide
Query:  LNLEATQLRLGLPGIDGSADNSCGVRTNKRNL------------QNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRK
        +NL+AT+LRLGLPG + +   SCG ++NKR L            +  +A PPK+Q+VGWPP+RS+RKN +  KK+E    +EG G YVKVSMDGAPYLRK
Subjt:  LNLEATQLRLGLPGIDGSADNSCGVRTNKRNL------------QNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRK

Query:  VDLGVYKGY
        +DL +YK Y
Subjt:  VDLGVYKGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCCAGCTTTCATTTCAGAACCATCTCAATCTCGAAGCCACCCAGCTTCGCCTCGGCCTCCCAGGAATCGACGGCTCTGCAGACAACTCTTGTGGGGTT
CGAACTAACAAGAGAAATTTACAGAATCACTCTGCCCCTCCACCCAAGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCGTTTAGGAAAAACACTCTCTTACCC
AAGAAAACGGAGGCAACGACGGCGGCGGAGGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGGTTGATTTGGGTGTGTACAAG
GGGTAC
mRNA sequenceShow/hide mRNA sequence
TTCAATTTCTGTTCCATTTGGGCGGCTCTTCCTGTCCCCTCCTCTGTCCCCTCTCCCCTTTCCCTTTGCCGCTCTCTGCCCCCATTCCCACCGACATCTCCTTCT
TCATCTTATCTATAAAACCACCCTTCCATTTCCAGCCTTTTCTGCTCTCACAAACCAAAAAATGGATTCCCAGCTTTCATTTCAGAACCATCTCAATCTCGAAGC
CACCCAGCTTCGCCTCGGCCTCCCAGGAATCGACGGCTCTGCAGACAACTCTTGTGGGGTTCGAACTAACAAGAGAAATTTACAGAATCACTCTGCCCCTCCACC
CAAGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCGTTTAGGAAAAACACTCTCTTACCCAAGAAAACGGAGGCAACGACGGCGGCGGAGGGCGGAGGGATTTA
TGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGGTTGATTTGGGTGTGTACAAGGGGTAC
Protein sequenceShow/hide protein sequence
MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYK
GY