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CmaCh06G009610 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G009610
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationCma_Chr06:6512889..6514847
RNA-Seq ExpressionCmaCh06G009610
SyntenyCmaCh06G009610
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1225231.1 Protein transport protein Sec61 subunit beta [Morella rubra]1.6e-3196.34Show/hide
Query:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGG APQRGSAAATASMRRRRTTSSG SGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

XP_011650635.1 protein transport protein Sec61 subunit beta [Cucumis sativus]1.4e-3297.56Show/hide
Query:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGGG PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

XP_022146520.1 protein transport protein Sec61 subunit beta-like [Momordica charantia]1.9e-3298.78Show/hide
Query:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGG APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

XP_022950482.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata]3.7e-33100Show/hide
Query:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

XP_038875187.1 protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]4.9e-3398.8Show/hide
Query:  RMALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        RMALGG APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  RMALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

TrEMBL top hitse value%identityAlignment
A0A0A0L6Y8 Protein transport protein Sec61 subunit beta6.9e-3397.56Show/hide
Query:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGGG PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVA+LHVMGKLYFVRREA
Subjt:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

A0A6J1EFZ9 Protein transport protein Sec61 subunit beta9.0e-3398.78Show/hide
Query:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGG APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

A0A6J1GEY3 Protein transport protein Sec61 subunit beta1.8e-33100Show/hide
Query:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

A0A6J1IH25 Protein transport protein Sec61 subunit beta1.8e-33100Show/hide
Query:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

A0A6J1J088 Protein transport protein Sec61 subunit beta9.0e-3398.78Show/hide
Query:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
        MALGG APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA
Subjt:  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta1.1e-0847.5Show/hide
Query:  ARSRMALGGGAPQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK
        A + +A GG +       A  ++RRR    SG SG   A    + FYTDD PG K+SP VV+ MS+ FIAFV ILHV+GK
Subjt:  ARSRMALGGGAPQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK

P38389 Protein transport protein Sec61 subunit beta2.4e-2782.72Show/hide
Query:  LGGGAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +G GAPQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGGAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR

P60467 Protein transport protein Sec61 subunit beta6.9e-0643.59Show/hide
Query:  GGAPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK
        G +P +  A  AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Subjt:  GGAPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK

P60468 Protein transport protein Sec61 subunit beta6.9e-0643.59Show/hide
Query:  GGAPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK
        G +P +  A  AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VLVMS+ FIA V +LH+ GK
Subjt:  GGAPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK

Q9HFC7 Protein transport protein Sec61 subunit beta2.4e-0649.18Show/hide
Query:  ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKL
        A AS R   T S G +GG++ TML+ YTD++ GLK+ P VV+V+S+GFI  V  LH++ K+
Subjt:  ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKL

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein1.7e-2882.72Show/hide
Query:  LGGGAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +G GAPQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGGAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein1.7e-2882.72Show/hide
Query:  LGGGAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +G GAPQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGGAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein1.7e-2882.72Show/hide
Query:  LGGGAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +G GAPQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGGAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein1.7e-2882.72Show/hide
Query:  LGGGAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +G GAPQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGGAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR

AT3G60540.1 Preprotein translocase Sec, Sec61-beta subunit protein5.0e-2883.33Show/hide
Query:  LGGGAPQRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR
        +GGGAPQRGSAAATASMRRR+    S ++GG AGTMLQFYTDDAPGLKISPNVVL+MSIGFIAFVA+LHVMGKLYFV+
Subjt:  LGGGAPQRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAATTGGCATTTGTTCTCTTCGTCGTCTCAAACATTAAACCGATCATTTGGAGGCTCTGTCGATCCCAACTCGAACTTGACTCAGGCAAGGTTCGTTTCGCTCC
TCCATCTGGGTTTTCTGCTGCAAAACAACAGATCTCCCTCTTCTCCCTCCCCACCCCCCTCTTTCAATTTGTTTCTTCCTCTTTTTGGTTCTGTTTGGTGAGAGTTTATG
GCGTCTGTCACCCCCCTCTTTCAATTTGTTTCTTCCTCTTTTTGGTTCTGTTTGGTTGCAATTTACGGAAATTGTCTGAACTTCTGTTGAAGGGTTTGTTTTTCCTTCAA
TTTGCACGTTCCAGAATGGCACTAGGTGGAGGAGCTCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGGACGACAAGTTCAGGTACATCTGGAGG
GGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGCCTCAAGATATCCCCCAACGTTGTACTCGTCATGAGCATTGGTTTCATTGCGTTTGTTGCCATTC
TCCATGTTATGGGAAAGCTGTACTTCGTGCGAAGAGAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAATTGGCATTTGTTCTCTTCGTCGTCTCAAACATTAAACCGATCATTTGGAGGCTCTGTCGATCCCAACTCGAACTTGACTCAGGCAAGGTTCGTTTCGCTCC
TCCATCTGGGTTTTCTGCTGCAAAACAACAGATCTCCCTCTTCTCCCTCCCCACCCCCCTCTTTCAATTTGTTTCTTCCTCTTTTTGGTTCTGTTTGGTGAGAGTTTATG
GCGTCTGTCACCCCCCTCTTTCAATTTGTTTCTTCCTCTTTTTGGTTCTGTTTGGTTGCAATTTACGGAAATTGTCTGAACTTCTGTTGAAGGGTTTGTTTTTCCTTCAA
TTTGCACGTTCCAGAATGGCACTAGGTGGAGGAGCTCCCCAGAGAGGAAGTGCGGCAGCTACTGCCAGCATGCGCAGGAGAAGGACGACAAGTTCAGGTACATCTGGAGG
GGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGCCTCAAGATATCCCCCAACGTTGTACTCGTCATGAGCATTGGTTTCATTGCGTTTGTTGCCATTC
TCCATGTTATGGGAAAGCTGTACTTCGTGCGAAGAGAAGCCTAGTGGGTTTTGCCCTTGATTAAGTATTGAATATTTAAATGCAATGAGACAAAAGTTTAATTTTGATCT
GAATTCTCCTTTCATTACTGTAAAACAAATTTCCATTTTTGTTACTAGTTTTTTAGCATGAAAGATTCTGTTCTGGTTGTGATCTTACTTATTGCAGCGTTTGGTAATAG
GCTAACTTGACGTTTTAGAAATTGGGAGCGTTGCATACTGCAACCTATTTCTAGTTTGCAACATGATGTCCAGGAAGACACTTTCTGGTTGATTCTTGAATTTAGAATCA
GATTTGTTTAAAGTGGTTTCCAGACAGCAGGCTTTTCAATTACAC
Protein sequenceShow/hide protein sequence
MFELAFVLFVVSNIKPIIWRLCRSQLELDSGKVRFAPPSGFSAAKQQISLFSLPTPLFQFVSSSFWFCLVRVYGVCHPPLSICFFLFLVLFGCNLRKLSELLLKGLFFLQ
FARSRMALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA