; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G010360 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G010360
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptioncommon plant regulatory factor 1 isoform X2
Genome locationCma_Chr06:6977880..6979559
RNA-Seq ExpressionCmaCh06G010360
SyntenyCmaCh06G010360
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR004827 - Basic-leucine zipper domain
IPR044827 - G-box-binding factor-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597103.1 Common plant regulatory factor 1, partial [Cucurbita argyrosperma subsp. sororia]8.9e-4998.21Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
        AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRT+HLVSTDIKGPVNKSINE+SNICKKKSSSGAKLRQLL
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL

Query:  DTNPRADCVAAS
        DTNPRADCVAAS
Subjt:  DTNPRADCVAAS

XP_022933654.1 G-box-binding factor 3 [Cucurbita moschata]3.4e-4898.21Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
        AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRT+ LVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL

Query:  DTNPRADCVAAS
        DTNPRADCVAAS
Subjt:  DTNPRADCVAAS

XP_022974653.1 G-box-binding factor 3-like [Cucurbita maxima]1.4e-49100Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
        AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL

Query:  DTNPRADCVAAS
        DTNPRADCVAAS
Subjt:  DTNPRADCVAAS

XP_023540367.1 G-box-binding factor 3 [Cucurbita pepo subsp. pepo]4.0e-4999.11Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
        AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRT+HLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL

Query:  DTNPRADCVAAS
        DTNPRADCVAAS
Subjt:  DTNPRADCVAAS

XP_038899193.1 G-box-binding factor 3 [Benincasa hispida]1.2e-4087.5Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
        AETEELA KVDSLTAENVAIRSEISRLSENSEKLK+EN+TLMEKLKS QSGRTEALDMNEKR +  +ST+IKGPVNKSINEES ICKK SSSGAKLRQLL
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL

Query:  DTNPRADCVAAS
        DT+PRAD VAAS
Subjt:  DTNPRADCVAAS

TrEMBL top hitse value%identityAlignment
A0A1S3AVB1 common plant regulatory factor 1 isoform X13.1e-3984.82Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
        AETEELA KVDSLTAENVAIRSEISRLSENSEKLK+EN+TLMEKLKSAQSGR+EALDMNEK+ +  VS ++KGPVNKSI+EES ICKK SSSGAKLRQLL
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL

Query:  DTNPRADCVAAS
        DT+PRAD VAAS
Subjt:  DTNPRADCVAAS

A0A5A7U125 Common plant regulatory factor 1 isoform X13.1e-3984.82Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
        AETEELA KVDSLTAENVAIRSEISRLSENSEKLK+EN+TLMEKLKSAQSGR+EALDMNEK+ +  VS ++KGPVNKSI+EES ICKK SSSGAKLRQLL
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL

Query:  DTNPRADCVAAS
        DT+PRAD VAAS
Subjt:  DTNPRADCVAAS

A0A5D3D202 Common plant regulatory factor 1 isoform X23.1e-3984.82Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
        AETEELA KVDSLTAENVAIRSEISRLSENSEKLK+EN+TLMEKLKSAQSGR+EALDMNEK+ +  VS ++KGPVNKSI+EES ICKK SSSGAKLRQLL
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL

Query:  DTNPRADCVAAS
        DT+PRAD VAAS
Subjt:  DTNPRADCVAAS

A0A6J1F0D0 G-box-binding factor 31.6e-4898.21Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
        AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRT+ LVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL

Query:  DTNPRADCVAAS
        DTNPRADCVAAS
Subjt:  DTNPRADCVAAS

A0A6J1II40 G-box-binding factor 3-like6.6e-50100Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
        AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLL

Query:  DTNPRADCVAAS
        DTNPRADCVAAS
Subjt:  DTNPRADCVAAS

SwissProt top hitse value%identityAlignment
P42775 G-box-binding factor 21.8e-0736.84Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKL--RQ
        AETE+L+ KVD+L AEN+++RS++ +L+  SEKL+ EN  ++++LK+  +G+TE                         N  S + K  S SG+K    Q
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKL--RQ

Query:  LLDTNPRADCVAAS
        LL+ +P  D VAAS
Subjt:  LLDTNPRADCVAAS

P42776 G-box-binding factor 34.8e-1346.9Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIK--GPVNKSINEESNICKKKSSSGAKLRQ
        AETEELA KV++LTAEN+A+RSE+++L+E S+KL+  NATL++KLK ++          EKR    + + +K  G  +K+ N+  N     S+S +KL Q
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIK--GPVNKSINEESNICKKKSSSGAKLRQ

Query:  LLDTNPRADCVAA
        LLDT PRA  VAA
Subjt:  LLDTNPRADCVAA

Q99089 Common plant regulatory factor 11.8e-1545.38Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDM---NEKRTKHLVSTDIKGPVNKS-----INEESNICKKKSSS
        AE EELA KVDSLTAEN+A+++EI+RL+  +EKL  +N+ L+E +K+AQ+ R   + +   NEK+   L + ++   V+ +        ES++ +K + S
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDM---NEKRTKHLVSTDIKGPVNKS-----INEESNICKKKSSS

Query:  GAKLRQLLDTNPRADCVAA
        GAKL QLLD NPR D VAA
Subjt:  GAKLRQLLDTNPRADCVAA

Q99142 Transcriptional activator TAF-1 (Fragment)4.6e-0869.57Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLK
        AE EELA +V SLTAEN+ ++SEI++L ENSEKLK ENA LME+LK
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLK

Arabidopsis top hitse value%identityAlignment
AT1G32150.1 basic region/leucine zipper transcription factor 682.4e-0436.62Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDI
        AE +ELA + + L  EN ++R+EI++L    E+L  EN++L  K  SA S     LD NE+  +     D+
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDI

AT2G46270.1 G-box binding factor 33.4e-1446.9Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIK--GPVNKSINEESNICKKKSSSGAKLRQ
        AETEELA KV++LTAEN+A+RSE+++L+E S+KL+  NATL++KLK ++          EKR    + + +K  G  +K+ N+  N     S+S +KL Q
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIK--GPVNKSINEESNICKKKSSSGAKLRQ

Query:  LLDTNPRADCVAA
        LLDT PRA  VAA
Subjt:  LLDTNPRADCVAA

AT2G46270.2 G-box binding factor 33.4e-1446.9Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIK--GPVNKSINEESNICKKKSSSGAKLRQ
        AETEELA KV++LTAEN+A+RSE+++L+E S+KL+  NATL++KLK ++          EKR    + + +K  G  +K+ N+  N     S+S +KL Q
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIK--GPVNKSINEESNICKKKSSSGAKLRQ

Query:  LLDTNPRADCVAA
        LLDT PRA  VAA
Subjt:  LLDTNPRADCVAA

AT4G01120.1 G-box binding factor 21.3e-0836.84Show/hide
Query:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKL--RQ
        AETE+L+ KVD+L AEN+++RS++ +L+  SEKL+ EN  ++++LK+  +G+TE                         N  S + K  S SG+K    Q
Subjt:  AETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKL--RQ

Query:  LLDTNPRADCVAAS
        LL+ +P  D VAAS
Subjt:  LLDTNPRADCVAAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCACCTCGTACCAGATGATATCTCATCATTTGGCTGAGACTGAAGAACTAGCTCATAAAGTCGATTCACTGACTGCGGAGAACGTCGCTATTAGATCTGAAATAAG
TAGATTGTCGGAGAATTCCGAGAAACTTAAGCAAGAAAACGCTACATTGATGGAGAAGCTTAAAAGCGCTCAATCAGGTCGAACAGAAGCATTAGACATGAACGAAAAAA
GGACAAAACATCTTGTAAGCACAGACATCAAAGGACCTGTGAACAAAAGCATCAACGAAGAGAGTAACATCTGCAAGAAGAAATCGAGTTCGGGAGCAAAGTTGCGTCAA
CTCTTGGACACGAATCCAAGGGCCGACTGCGTTGCCGCCAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGCACCTCGTACCAGATGATATCTCATCATTTGGCTGAGACTGAAGAACTAGCTCATAAAGTCGATTCACTGACTGCGGAGAACGTCGCTATTAGATCTGAAATAAG
TAGATTGTCGGAGAATTCCGAGAAACTTAAGCAAGAAAACGCTACATTGATGGAGAAGCTTAAAAGCGCTCAATCAGGTCGAACAGAAGCATTAGACATGAACGAAAAAA
GGACAAAACATCTTGTAAGCACAGACATCAAAGGACCTGTGAACAAAAGCATCAACGAAGAGAGTAACATCTGCAAGAAGAAATCGAGTTCGGGAGCAAAGTTGCGTCAA
CTCTTGGACACGAATCCAAGGGCCGACTGCGTTGCCGCCAGCTAA
Protein sequenceShow/hide protein sequence
MRTSYQMISHHLAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQ
LLDTNPRADCVAAS