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CmaCh06G010780 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G010780
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCaspase recruitment domain family
Genome locationCma_Chr06:7260115..7261039
RNA-Seq ExpressionCmaCh06G010780
SyntenyCmaCh06G010780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER51041.1 caspase recruitment domain family [Striga asiatica]4.5e-0969.81Show/hide
Query:  IPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPDIM
        +PPDISLP AMTA VGE HVS  +  C VG P  MPYSS PL TATQSSPD+M
Subjt:  IPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPDIM

TrEMBL top hitse value%identityAlignment
A0A0A9L2M0 Uncharacterized protein6.4e-1774.29Show/hide
Query:  TPDSESTATMSSARTSSIPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPDIM
        TPDSE TA MSSARTS +PPDISLPSA+TALVG+THV   IT C +G P  MPYSSQPLL ATQSSP+ M
Subjt:  TPDSESTATMSSARTSSIPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPDIM

A0A0A9Q235 Uncharacterized protein9.2e-0853.75Show/hide
Query:  FTYPPLPMPVLILTPDSESTATMSSARTSSIPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSP
        FTYPP P  VLIL P  E T    SARTS +PPDISLP A+ A    + V LL+    +G  N MPYSS PLL    SSP
Subjt:  FTYPPLPMPVLILTPDSESTATMSSARTSSIPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSP

A0A2P2IJP3 Uncharacterized protein5.6e-1373.77Show/hide
Query:  ATMSSARTSSIPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPD
        A MSSA TS IPPDISLP+A+TAL GE  VSLL+T+CLVG P  +PYSSQP LTATQSSP+
Subjt:  ATMSSARTSSIPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPD

A0A3Q7G2T5 Uncharacterized protein1.4e-0864.15Show/hide
Query:  IPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPDIM
        +PPDISLP AMTAL G+  V  L+  C VG PN +PYSSQPL TA QSSP+ M
Subjt:  IPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPDIM

A0A5A7R430 Caspase recruitment domain family2.2e-0969.81Show/hide
Query:  IPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPDIM
        +PPDISLP AMTA VGE HVS  +  C VG P  MPYSS PL TATQSSPD+M
Subjt:  IPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPDIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTTACATATCCTCCCCTTCCTATGCCTGTTTTGATCCTGACCCCAGATTCAGAATCAACGGCTACTATGTCTTCTGCTCGGACATCTTCGATTCCACCCGACAT
CTCACTCCCCAGTGCAATGACAGCACTTGTCGGGGAAACGCACGTGAGCCTTCTGATTACCAATTGCTTAGTTGGCCATCCAAATCTTATGCCATACTCGTCCCAGCCGC
TCTTGACAGCTACACAATCGTCTCCAGATATTATGATGAACATTCCAAGCTGGAGAATTCAGCAGGGTCAGATTCGATATCTGTATGTTGCTGGAATACATGATCTCGAT
CAAGTATGGTCGGGTGTACTTAAGCTTATTCTGATGAAACAGCTGCCACCAGCGATCACCTTGACCATCAATGGTGCCATTGTTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTTACATATCCTCCCCTTCCTATGCCTGTTTTGATCCTGACCCCAGATTCAGAATCAACGGCTACTATGTCTTCTGCTCGGACATCTTCGATTCCACCCGACAT
CTCACTCCCCAGTGCAATGACAGCACTTGTCGGGGAAACGCACGTGAGCCTTCTGATTACCAATTGCTTAGTTGGCCATCCAAATCTTATGCCATACTCGTCCCAGCCGC
TCTTGACAGCTACACAATCGTCTCCAGATATTATGATGAACATTCCAAGCTGGAGAATTCAGCAGGGTCAGATTCGATATCTGTATGTTGCTGGAATACATGATCTCGAT
CAAGTATGGTCGGGTGTACTTAAGCTTATTCTGATGAAACAGCTGCCACCAGCGATCACCTTGACCATCAATGGTGCCATTGTTTCCTGATGTACATTAGGTGAAACTCA
AACGTTCAGACACCGATCAAGAAAAATGAGACAAGCTCCAACAGAGGTACGCTTACCTGTGATGACAACATCAGTGAGATTTGTTCCAAATATTAAACTGATGTACCGTC
CCCCTGATGTGTCCCTTCCATGACCGTAGGATGGCAACGGTTCGACCACCGGCCATTCGTTCGGATCCTATTGAAGTAGTTGAAAATCAGTCTTAAGCTAT
Protein sequenceShow/hide protein sequence
MSFTYPPLPMPVLILTPDSESTATMSSARTSSIPPDISLPSAMTALVGETHVSLLITNCLVGHPNLMPYSSQPLLTATQSSPDIMMNIPSWRIQQGQIRYLYVAGIHDLD
QVWSGVLKLILMKQLPPAITLTINGAIVS