; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G011990 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G011990
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionWerner Syndrome-like exonuclease
Genome locationCma_Chr06:8017226..8020818
RNA-Seq ExpressionCmaCh06G011990
SyntenyCmaCh06G011990
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR002562 - 3'-5' exonuclease domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597271.1 Werner Syndrome-like exonuclease, partial [Cucurbita argyrosperma subsp. sororia]9.2e-13780.66Show/hide
Query:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM
        MEFPCSSNRAGASTELSVCSSPSSSYSFS+SEFDQPFTEQQLQAIEAIEA YQATTAKRRRENEV CVSP+SGRRLPRS+SSLQSPHSSPLSPCRVTS M
Subjt:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM

Query:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA
        RFPALKF GRIVYSRTAS                                      VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLED+TLSKA
Subjt:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA

Query:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS
        GVGIVNDAMKVFKDYNVSI+AVDEISNLANQKL AGVPKKWSLGSLTEALISKE              +PKPSKIRLGNWEVA+LSKEQLHYAATDAFAS
Subjt:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS

Query:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
        WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
Subjt:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ

KAG7028742.1 Werner Syndrome-like exonuclease [Cucurbita argyrosperma subsp. argyrosperma]7.0e-13780.97Show/hide
Query:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM
        MEFPCSSNRAGASTELSVCSSPSSSYSFS+SEFDQPFTEQQLQAIEAIEA YQATTAKRRRENEV CVSP+SGRRLPRSISSLQSPHSSPLSPCRVTS M
Subjt:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM

Query:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA
        RFPALKF GRIVYSRTAS                                      VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLED+TLSKA
Subjt:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA

Query:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS
        GVGIVNDAMKVFKDYNVSI+AVDEISNLANQKL AGVPKKWSLGSLTEALISKE              +PKPSKIRLGNWEVA+LSKEQLHYAATDAFAS
Subjt:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS

Query:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
        WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
Subjt:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ

XP_022947132.1 Werner Syndrome-like exonuclease [Cucurbita moschata]6.4e-13881.27Show/hide
Query:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM
        MEFPCSSNRAGASTELSVCSSPSSSYSFS+SEFDQPFTEQQLQAIEAIEA YQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTS M
Subjt:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM

Query:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA
        RFPALKFGGRIVYSRTAS                                      VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLED+TL+KA
Subjt:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA

Query:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS
        GVGIVNDAMKVFKDYNVSI+AVDEISNLANQKL AGVPKKWSLGSLTEALISKE              +PKPSKIRLGNWEVA+LSKEQLHYAATDAFAS
Subjt:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS

Query:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
        WYLHEILKGFPDPQ AADSEGDEEPICVMPQ
Subjt:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ

XP_022974736.1 Werner Syndrome-like exonuclease [Cucurbita maxima]7.8e-14483.99Show/hide
Query:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM
        MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM
Subjt:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM

Query:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA
        RFPALKFGGRIVYSRTAS                                      VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA
Subjt:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA

Query:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS
        GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKE              +PKPSKIRLGNWEVAMLSKEQLHYAATDAFAS
Subjt:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS

Query:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
        WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
Subjt:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ

XP_023540073.1 Werner Syndrome-like exonuclease [Cucurbita pepo subsp. pepo]3.5e-13680.36Show/hide
Query:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM
        MEF CSSNRAGASTELSVCSSPSSSYSFS+SEFDQPFTEQQLQAIEAIEA YQ+TTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTS M
Subjt:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM

Query:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA
        RFPALKFGGRIVYSRTAS                                      VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLED+TLSKA
Subjt:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA

Query:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS
        GVGIVNDAMKVFKD+NVSI+AVDEISNLAN+KL AGVPKKWSLGSLTEALISKE              +PKPSKIRLGNWEVA+LSKEQLHYAATDAFAS
Subjt:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS

Query:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
        WYLHEILKGFPDPQ+AADSEGDEEPICVMPQ
Subjt:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ

TrEMBL top hitse value%identityAlignment
A0A1S3AWQ6 Werner Syndrome-like exonuclease1.0e-10165.03Show/hide
Query:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRR------ENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPC
        MEFP SSN   +STELS CSS   S+SFS SEFDQPFTEQQLQAIEAIEA YQ+T+AK+RR      EN V CVSPN+GRRLPRSI S QSPH SPLS C
Subjt:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRR------ENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPC

Query:  RVTSMMRFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLED
        RV S MRFPAL +GGRI+YSRT S                                      VPPGKAAVMQLCL++S+CHVMHIIHSGIP+SLQALLED
Subjt:  RVTSMMRFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLED

Query:  NTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAA
        +TL+KAGVGI +DA KVFKDYNVS++ +DEIS+LANQKL AGVPKKW L +LTE LISKE              + KP +IRLGNWEVA+LSKEQLHYAA
Subjt:  NTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAA

Query:  TDAFASWYLHEILKGFPDPQKAADSE
        TDAFASWYLHEILKGFP  +K ADSE
Subjt:  TDAFASWYLHEILKGFPDPQKAADSE

A0A5A7TZU7 Werner Syndrome-like exonuclease4.8e-9964.69Show/hide
Query:  SNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRR------ENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM
        SN   +STELS CSS   S+SFS SEFDQPFTEQQLQAIEAIEA YQ+T+AK+RR      EN V CVSPN+GRRLPRSI S QSPH SPLS CRV S M
Subjt:  SNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRR------ENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM

Query:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA
        RFPAL +GGRI+YSRT S                                      VPPGKAAVMQLCL++S+CHVMHIIHSGIP+SLQALLED+TL+KA
Subjt:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA

Query:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS
        GVGI +DA KVFKDYNVS++ +DEIS+LANQKL AGVPKKW L +LTE LISKE              + KP +IRLGNWEVA+LSKEQLHYAATDAFAS
Subjt:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS

Query:  WYLHEILKGFPDPQKAADSE
        WYLHEILKGFP  +K ADSE
Subjt:  WYLHEILKGFPDPQKAADSE

A0A6J1D021 Werner Syndrome-like exonuclease3.3e-10064.76Show/hide
Query:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRR------ENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPC
        MEFP  S  AGAS  LSV SS  SS SFSVSEFDQPFTEQQLQ I+AIEA YQ+T+ KRRR      ENE  CVSPN+GRRLP SI SLQ P+SSPLSP 
Subjt:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRR------ENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPC

Query:  RVTSMMRFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLED
        RV S MRFPAL F GRI+YS TAS                                      VPPGK AVMQLCLD+SQCHVMHIIHSGI  SL+ LLED
Subjt:  RVTSMMRFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLED

Query:  NTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAA
        +TLSKAGVGI NDA+KVFKDYNVSI+AV EIS+LANQKL AGVP+KW LGSLT+AL+SKE              + KP+KIRLGNWEVA+LSK+QL YAA
Subjt:  NTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAA

Query:  TDAFASWYLHEILKGFPDPQKAADSEGDEEPI
        TDAFASWYLHEILKGFP  QK  DSE D EPI
Subjt:  TDAFASWYLHEILKGFPDPQKAADSEGDEEPI

A0A6J1G5L3 Werner Syndrome-like exonuclease3.1e-13881.27Show/hide
Query:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM
        MEFPCSSNRAGASTELSVCSSPSSSYSFS+SEFDQPFTEQQLQAIEAIEA YQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTS M
Subjt:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM

Query:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA
        RFPALKFGGRIVYSRTAS                                      VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLED+TL+KA
Subjt:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA

Query:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS
        GVGIVNDAMKVFKDYNVSI+AVDEISNLANQKL AGVPKKWSLGSLTEALISKE              +PKPSKIRLGNWEVA+LSKEQLHYAATDAFAS
Subjt:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS

Query:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
        WYLHEILKGFPDPQ AADSEGDEEPICVMPQ
Subjt:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ

A0A6J1IC67 Werner Syndrome-like exonuclease3.8e-14483.99Show/hide
Query:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM
        MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM
Subjt:  MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMM

Query:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA
        RFPALKFGGRIVYSRTAS                                      VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA
Subjt:  RFPALKFGGRIVYSRTAS--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKA

Query:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS
        GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKE              +PKPSKIRLGNWEVAMLSKEQLHYAATDAFAS
Subjt:  GVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFAS

Query:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
        WYLHEILKGFPDPQKAADSEGDEEPICVMPQ
Subjt:  WYLHEILKGFPDPQKAADSEGDEEPICVMPQ

SwissProt top hitse value%identityAlignment
O09053 Werner syndrome ATP-dependent helicase homolog1.8e-1830.88Show/hide
Query:  PALKFGGRIVYSRTAS----------------------------VPPGK---AAVMQLCLDHSQCHVMHIIHSGI-PRSLQALLEDNTLSKAGVGIVNDA
        P L+F G IVYS  AS                              PGK    AV+QLC+  S+C++ HI    + P+ L+ LLE+ ++ KAGVGI  D 
Subjt:  PALKFGGRIVYSRTAS----------------------------VPPGK---AAVMQLCLDHSQCHVMHIIHSGI-PRSLQALLEDNTLSKAGVGIVNDA

Query:  MKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILK
         K+ +D++V + +  E++++AN+KL     + WSL  L + ++ K+              + K   IR  NW    L+++Q  YAATDA+A   +++ L 
Subjt:  MKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILK

Query:  GFPD
           D
Subjt:  GFPD

O93530 Werner syndrome ATP-dependent helicase homolog1.2e-1934.44Show/hide
Query:  GKAAVMQLCLDHSQCHVMHII-HSGIPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIF
        GK A++Q+C+   +C++ HI   +G P+ L+ LLED ++ K GVGI  D  K+  DY + ++   E+S +ANQKL     +KW+   L + L  ++    
Subjt:  GKAAVMQLCLDHSQCHVMHII-HSGIPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIF

Query:  SLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILKG
         LY         K    R  NW++ +L+++Q  YAATDA+A   +++ L+G
Subjt:  SLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILKG

Q14191 Werner syndrome ATP-dependent helicase4.7e-1930.09Show/hide
Query:  PALKFGGRIVYSRTAS------------------------VPP-------GKAAVMQLCLDHSQCHVMHIIHSGI-PRSLQALLEDNTLSKAGVGIVNDA
        P L+F G IVYS  AS                         PP       GK A++QLC+  S+C++ H+    + P+ L+ LLE+  + KAGVGI  D 
Subjt:  PALKFGGRIVYSRTAS------------------------VPP-------GKAAVMQLCLDHSQCHVMHIIHSGI-PRSLQALLEDNTLSKAGVGIVNDA

Query:  MKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILK
         K+ +D+++ ++   E++++AN+KL     + WSL SL + L+ K+              + K   IR  NW    L+++Q  YAATDA+A + ++  L+
Subjt:  MKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILK

Query:  GFPDPQKAADSEGDEE
           D  +      +EE
Subjt:  GFPDPQKAADSEGDEE

Q84LH3 Werner Syndrome-like exonuclease7.7e-5443.39Show/hide
Query:  DQPFTEQQLQAIEAIEAEY----------------QATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMMRFPALKFGGRIVYSRTA
        D  FTE++L AI+AIEA Y                QATT+    E +   +  N  R+LPRSI+S  S    PLS CR  +   FPA++FGGRI+YS+TA
Subjt:  DQPFTEQQLQAIEAIEAEY----------------QATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMMRFPALKFGGRIVYSRTA

Query:  S--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNV
        +                                      V PGK A +Q+C+D + C VMHI HSGIP+SLQ L+ED+TL K G+GI  D++K+F DY V
Subjt:  S--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNV

Query:  SIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILKGFPD
        SI+ V+++S+LANQK+  G  KKW L SLTE L+ KE              + KP++IRLGNWE   LSK+QL YAATDA+ASW+L+++LK  PD
Subjt:  SIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILKGFPD

Q8VEG4 Exonuclease 3'-5' domain-containing protein 22.2e-0828.38Show/hide
Query:  IIHSG--IPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIR
        +I+ G  +PR+L  +L D  + K GVG   DA K+ +DY + +R   ++  LA ++    +    SL SL E +++  +D              K   +R
Subjt:  IIHSG--IPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIR

Query:  LGNWEVAMLSKEQLHYAATDAFASWYLHEILKGFPDPQKAADSEGDEE
          NW+   L+++Q+ YAA DA  S  L   L G+P  + + + E  ++
Subjt:  LGNWEVAMLSKEQLHYAATDAFASWYLHEILKGFPDPQKAADSEGDEE

Arabidopsis top hitse value%identityAlignment
AT4G13870.1 Werner syndrome-like exonuclease2.6e-5243.05Show/hide
Query:  DQPFTEQQLQAIEAIEAEY----------------QATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMMRFPALKFGGRIVYSRTA
        D  FTE++L AI+AIEA Y                QATT+    E +   +  N  R+LPRSI+S  S    PLS CR  +   FPA++FGGRI+YS+TA
Subjt:  DQPFTEQQLQAIEAIEAEY----------------QATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMMRFPALKFGGRIVYSRTA

Query:  S--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNV
        +                                      V PGK A +Q+C+D + C VMHI HSGIP+SLQ L+ED+TL K G+GI  D++K+F DY V
Subjt:  S--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNV

Query:  SIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILKGFPD
        SI+ V+++S+LANQK+  G  KKW L SLTE L+ KE              + KP++IRLGNWE   LSK+QL YAATDA+ASW+L+   K  PD
Subjt:  SIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILKGFPD

AT4G13870.2 Werner syndrome-like exonuclease5.5e-5543.39Show/hide
Query:  DQPFTEQQLQAIEAIEAEY----------------QATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMMRFPALKFGGRIVYSRTA
        D  FTE++L AI+AIEA Y                QATT+    E +   +  N  R+LPRSI+S  S    PLS CR  +   FPA++FGGRI+YS+TA
Subjt:  DQPFTEQQLQAIEAIEAEY----------------QATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMMRFPALKFGGRIVYSRTA

Query:  S--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNV
        +                                      V PGK A +Q+C+D + C VMHI HSGIP+SLQ L+ED+TL K G+GI  D++K+F DY V
Subjt:  S--------------------------------------VPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNV

Query:  SIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILKGFPD
        SI+ V+++S+LANQK+  G  KKW L SLTE L+ KE              + KP++IRLGNWE   LSK+QL YAATDA+ASW+L+++LK  PD
Subjt:  SIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILKGFPD

AT4G13885.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-1536.8Show/hide
Query:  LQALLEDNTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSK
        LQ L+ED+TL K G+GI  D++K+F DY                                                     + KP++IRLGNWEV  LSK
Subjt:  LQALLEDNTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIFSLYIPLPSNCIPKPSKIRLGNWEVAMLSK

Query:  EQLHYAATDAFASWYLHEILKGFPD
        +QL YAATDA+ASW+LH++LK  PD
Subjt:  EQLHYAATDAFASWYLHEILKGFPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCCCCTGCAGTAGCAACCGTGCCGGAGCGTCGACGGAGCTCTCCGTCTGTTCTTCACCTTCTTCGTCGTATTCGTTCTCCGTATCGGAGTTCGATCAGCCATT
TACTGAACAGCAACTCCAGGCGATCGAGGCCATTGAAGCTGAATATCAGGCCACCACCGCCAAAAGACGACGAGAAAATGAGGTCTTGTGTGTTTCTCCCAACTCCGGCC
GTCGATTGCCTCGCTCCATTTCGTCTCTCCAGTCTCCACATTCTTCTCCATTATCGCCCTGTCGAGTTACCTCGATGATGAGATTTCCTGCCTTGAAATTTGGTGGCCGA
ATTGTTTATAGTAGAACTGCTAGTGTTCCACCCGGGAAGGCAGCAGTCATGCAACTGTGCTTGGACCATTCACAGTGCCATGTGATGCATATCATTCATTCAGGAATACC
CCGAAGTTTGCAGGCTCTTCTTGAAGATAACACACTCAGTAAGGCTGGAGTTGGCATTGTTAATGATGCTATGAAAGTTTTTAAAGATTATAACGTGTCTATCAGAGCAG
TCGACGAGATCTCGAATCTAGCTAATCAAAAGCTTGCTGCTGGAGTTCCCAAAAAATGGAGCCTTGGATCTTTAACTGAGGCGCTCATATCCAAAGAGGTTGATATATTC
TCTCTTTATATTCCATTACCGAGCAACTGCATTCCAAAACCCAGCAAGATCAGACTTGGAAACTGGGAGGTCGCTATGTTATCTAAGGAGCAACTGCATTATGCTGCCAC
AGACGCCTTTGCTTCTTGGTACTTACATGAGATCTTAAAGGGATTTCCAGATCCTCAAAAAGCAGCAGATTCAGAGGGAGATGAGGAACCAATATGTGTGATGCCACAAT
GA
mRNA sequenceShow/hide mRNA sequence
CTTCAATCAATTTTTCCTCCGTCCGAAAAGTGACGGCTCCATTAAACTGAAAATGGAATTCCCCTGCAGTAGCAACCGTGCCGGAGCGTCGACGGAGCTCTCCGTCTGTT
CTTCACCTTCTTCGTCGTATTCGTTCTCCGTATCGGAGTTCGATCAGCCATTTACTGAACAGCAACTCCAGGCGATCGAGGCCATTGAAGCTGAATATCAGGCCACCACC
GCCAAAAGACGACGAGAAAATGAGGTCTTGTGTGTTTCTCCCAACTCCGGCCGTCGATTGCCTCGCTCCATTTCGTCTCTCCAGTCTCCACATTCTTCTCCATTATCGCC
CTGTCGAGTTACCTCGATGATGAGATTTCCTGCCTTGAAATTTGGTGGCCGAATTGTTTATAGTAGAACTGCTAGTGTTCCACCCGGGAAGGCAGCAGTCATGCAACTGT
GCTTGGACCATTCACAGTGCCATGTGATGCATATCATTCATTCAGGAATACCCCGAAGTTTGCAGGCTCTTCTTGAAGATAACACACTCAGTAAGGCTGGAGTTGGCATT
GTTAATGATGCTATGAAAGTTTTTAAAGATTATAACGTGTCTATCAGAGCAGTCGACGAGATCTCGAATCTAGCTAATCAAAAGCTTGCTGCTGGAGTTCCCAAAAAATG
GAGCCTTGGATCTTTAACTGAGGCGCTCATATCCAAAGAGGTTGATATATTCTCTCTTTATATTCCATTACCGAGCAACTGCATTCCAAAACCCAGCAAGATCAGACTTG
GAAACTGGGAGGTCGCTATGTTATCTAAGGAGCAACTGCATTATGCTGCCACAGACGCCTTTGCTTCTTGGTACTTACATGAGATCTTAAAGGGATTTCCAGATCCTCAA
AAAGCAGCAGATTCAGAGGGAGATGAGGAACCAATATGTGTGATGCCACAATGACATCCAATGGTTGCATTAAGATCGAAGCTCAACACTCAGCTAAGTTATCCAATTTA
TCTAATTAATTCTATTGTTGAAATTGTTTCTTATCTTAAGAAACTCTAAATTAATCTTATTGTTGATTTACTCTATTATGTATATGGTGTGGACTTCGAAATGTTAGACA
AGTCGATGAAAATTTAACATCCTGAATAATATTAAGGGTAATGTTGGAAATTCTTATTGAA
Protein sequenceShow/hide protein sequence
MEFPCSSNRAGASTELSVCSSPSSSYSFSVSEFDQPFTEQQLQAIEAIEAEYQATTAKRRRENEVLCVSPNSGRRLPRSISSLQSPHSSPLSPCRVTSMMRFPALKFGGR
IVYSRTASVPPGKAAVMQLCLDHSQCHVMHIIHSGIPRSLQALLEDNTLSKAGVGIVNDAMKVFKDYNVSIRAVDEISNLANQKLAAGVPKKWSLGSLTEALISKEVDIF
SLYIPLPSNCIPKPSKIRLGNWEVAMLSKEQLHYAATDAFASWYLHEILKGFPDPQKAADSEGDEEPICVMPQ