; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G012060 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G012060
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Genome locationCma_Chr06:8046742..8052790
RNA-Seq ExpressionCmaCh06G012060
SyntenyCmaCh06G012060
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597277.1 hypothetical protein SDJN03_10457, partial [Cucurbita argyrosperma subsp. sororia]5.0e-21395.88Show/hide
Query:  MEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESSKISN
        MEATPSVS SVD+QAVRSCIS++EELQRSLEEDEAYTTDSLGS KLLKECSLLLESRLQQTLSEWSNVDS LGIDDLDAYVERMKEELIAVEAESSKISN
Subjt:  MEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESSKISN

Query:  EIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQVEDT
        EIEVLKRTSIEDSNKL+MDLEVLKLSLDRCASQDPEKAT NCYSVNGEDQMDM VERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQVEDT
Subjt:  EIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQVEDT

Query:  IGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRIVLCA
        IGGLKVIDVTDNF+RLSLHSH+PNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTM+LKNAEIFPGDVHLHDIINAS   +NSSLEWFVRKVQDRIVLCA
Subjt:  IGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRIVLCA

Query:  LRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVEKIMK
        LRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHY KGVSLSLICKVEKMANSLDVGLRHDLSSFADAVEKIMK
Subjt:  LRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVEKIMK

Query:  EQMHLELQFDSAL
        EQMHLELQFDSAL
Subjt:  EQMHLELQFDSAL

KAG7028748.1 hypothetical protein SDJN02_09929, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-21997.36Show/hide
Query:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
        MAELMEATPSVS SVD+QAVRSCISEIEELQRSLEEDEAYTTDSLGS KLLKECSLLLESRLQQTLSEWSNVDS LGIDDLDAYVERMKEELIAVEAESS
Subjt:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS

Query:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
        KISNEIEVLKRTSIEDSNKL+MDLEVLKLSLDRCASQDPEKAT NCYSVNGEDQMDM VERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
Subjt:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ

Query:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
        VEDTIGGLKVIDVTDNF+RLSLHSH+PNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTM+LKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
Subjt:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI

Query:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
        VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHY KGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
Subjt:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE

Query:  KIMKEQMHLELQFDSAL
        KIMKEQMHLELQFDSAL
Subjt:  KIMKEQMHLELQFDSAL

XP_022934086.1 uncharacterized protein LOC111441363 [Cucurbita moschata]8.8e-21896.64Show/hide
Query:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
        MAELMEATPSVS SVD+QAVRSCISE+EELQRSLEEDEAYTTDSLGS KLLKECSLLLESRLQQTLSEWSNVDS LGIDDLDAYVERMKEELIAVEAESS
Subjt:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS

Query:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
        KISNEIEVLKRTSIEDSNKL+MDLEVLKLSLDRCASQDPEKAT NCYSVNGEDQMDM VERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
Subjt:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ

Query:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
        VEDTIGGLKVIDVTDNF+RLSLHSH+PNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTM+LKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
Subjt:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI

Query:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
        VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKV QGWPLSDSPLKLISLKSSDHY  GVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
Subjt:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE

Query:  KIMKEQMHLELQFDSAL
        KIMKEQMHLELQFDSAL
Subjt:  KIMKEQMHLELQFDSAL

XP_022974773.1 uncharacterized protein LOC111473498 [Cucurbita maxima]4.4e-225100Show/hide
Query:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
        MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
Subjt:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS

Query:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
        KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
Subjt:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ

Query:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
        VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
Subjt:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI

Query:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
        VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
Subjt:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE

Query:  KIMKEQMHLELQFDSAL
        KIMKEQMHLELQFDSAL
Subjt:  KIMKEQMHLELQFDSAL

XP_023538691.1 uncharacterized protein LOC111799561 [Cucurbita pepo subsp. pepo]1.6e-21997.36Show/hide
Query:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
        MAELMEATPSVS SVD+QAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDS LGIDDLDAYVERMKEELIAVEAESS
Subjt:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS

Query:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
        KIS+EIEVLKRTSIEDSNKL+MDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDM VERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
Subjt:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ

Query:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
        VEDTIGGLKVIDVTDNFVR+SLHSH+PNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTM+L NAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
Subjt:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI

Query:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
        VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRH+LSSFADAVE
Subjt:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE

Query:  KIMKEQMHLELQFDSAL
        KIMKEQMHLELQFDSAL
Subjt:  KIMKEQMHLELQFDSAL

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q3 Uncharacterized protein1.1e-18483.13Show/hide
Query:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
        M E MEATPSV  S+DLQAVR   SE+EELQRSLEE+E  TTDSLGSEKLL+EC+L LESR+QQ LSE+SNVDS LGIDDLDAYVE MKEEL+AVEAESS
Subjt:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS

Query:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
        KISNEIEVLKRT+IEDSNKLKMDLEVLKLSLDR  SQDPE+ATFNC S+NGED M++ V RECNAFEVLEL+SQIEKN++ LKSLQE+DEIFKSLDVIEQ
Subjt:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ

Query:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
        VE TIGG+KVIDV DN +RLSLH+H+PN+E+FS+LQRLEG+IE SELDHEL+IEVL+GTM+LKNAEIFP DVHLHDIINASKS SNSSLEWFVRKVQDRI
Subjt:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI

Query:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
        VLC LRRF VKSANKS HSFEYLDQDE I+C+MIGGIDA IKVSQGWPL+DSPLKLISLKSSDHY KGVSLSLICKVEKMANSLD  +R +LSSFADAVE
Subjt:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE

Query:  KIMKEQMHLELQFDS
        KI+KEQMHLELQ DS
Subjt:  KIMKEQMHLELQFDS

A0A5A7U6L2 Uncharacterized protein3.4e-18382.41Show/hide
Query:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
        M E ME TPSV  S+DLQAVR   SE+EELQRSLEE+E  + DSLGSEKLL+EC+L LESR+QQ LSE+SNVDS LGIDDLDAYVE MKEEL+AVEAESS
Subjt:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS

Query:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
        KISNEIEVLKRT+IEDSNKLKMDLEVLKLSLDR ASQDPE+ATFNC S+NGED+M++ V+RECNAFEVLEL+SQIEKN++ LKSLQE+DEIFKSLDVIEQ
Subjt:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ

Query:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
        VE TIGG+KVIDV DN +RLSLH+H+PN+E+FS+LQRLEG+IE SELDHEL+IEV  GTM+LKNAEIFP DVHLHDIINASKS SNSSLEWFVRKVQDRI
Subjt:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI

Query:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
        VLC LRRF VKSANKSSHSFEYLDQDE I+C+MIGGIDA IKVSQGWPL+DSPLKLISLKSSDHY KG+SLSLICKVEKMANSLD  +R +LSSFADAVE
Subjt:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE

Query:  KIMKEQMHLELQFDS
        KI+KEQMHLELQ DS
Subjt:  KIMKEQMHLELQFDS

A0A6J1CZ44 uncharacterized protein LOC1110160983.5e-18883.69Show/hide
Query:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
        M E MEATPSV   +DLQAVR  ISE+EELQRSLEEDEA +TDSLGSEKLLKEC+L LESRLQQ LSE+SNVDS LGIDDLDAYVE MKEEL+ VEAESS
Subjt:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS

Query:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
        KISNEIE +KR +IEDSN+LKMDLEVLKLSLDR  S+DPEKATFNC S +GEDQ++M  +RECNAFEVL+LDSQIE+N+R LKSLQELDEIFKSLDVIEQ
Subjt:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ

Query:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
        VEDTIGGLKVIDV +NF+RLSL +H+PNLE+ SSLQRLEG+IEPSEL+HELLIEVLEGTM+LKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
Subjt:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI

Query:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
        VLC LRRFVVK+ANKSSHSFEYLD+D TIICTMIGGI AVI+VSQGWPLSDSPLKLISLK+SDHY KG+SLSLICKVEKMANSLDV +RH+LSSFADA+E
Subjt:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE

Query:  KIMKEQMHLELQFDSAL
        KI+KE+MHLEL  D AL
Subjt:  KIMKEQMHLELQFDSAL

A0A6J1F0V9 uncharacterized protein LOC1114413634.3e-21896.64Show/hide
Query:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
        MAELMEATPSVS SVD+QAVRSCISE+EELQRSLEEDEAYTTDSLGS KLLKECSLLLESRLQQTLSEWSNVDS LGIDDLDAYVERMKEELIAVEAESS
Subjt:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS

Query:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
        KISNEIEVLKRTSIEDSNKL+MDLEVLKLSLDRCASQDPEKAT NCYSVNGEDQMDM VERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
Subjt:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ

Query:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
        VEDTIGGLKVIDVTDNF+RLSLHSH+PNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTM+LKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
Subjt:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI

Query:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
        VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKV QGWPLSDSPLKLISLKSSDHY  GVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
Subjt:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE

Query:  KIMKEQMHLELQFDSAL
        KIMKEQMHLELQFDSAL
Subjt:  KIMKEQMHLELQFDSAL

A0A6J1IHB4 uncharacterized protein LOC1114734982.1e-225100Show/hide
Query:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
        MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS
Subjt:  MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESS

Query:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
        KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ
Subjt:  KISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQ

Query:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
        VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI
Subjt:  VEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRI

Query:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
        VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE
Subjt:  VLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVE

Query:  KIMKEQMHLELQFDSAL
        KIMKEQMHLELQFDSAL
Subjt:  KIMKEQMHLELQFDSAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G23910.1 BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.2)1.2e-8442.68Show/hide
Query:  SVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESSKISNEIEVLKRTS
        S+DLQ +R  + E++   R+  E+   +  S     ++++  L  E ++++ + E+ +VD LL ++D DAY+E ++ EL +VEAES+K+S EIE L ++ 
Subjt:  SVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESSKISNEIEVLKRTS

Query:  IEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDV
         +DS++L+ DLE L LSLD  +SQD EK+  N  S      M++    + + F++ EL++Q+E+    LKSL++LD + K  D  EQVED + GLKV++ 
Subjt:  IEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQVEDTIGGLKVIDV

Query:  TDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSF-----------SNSSLEWFVRKVQDRIVL
          NF+RL L +++  L+ F    + + + EPSEL HELLI + + T ++   E+FP D+++ DII A+ SF           + SS++W V KVQD+I+ 
Subjt:  TDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSF-----------SNSSLEWFVRKVQDRIVL

Query:  CALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVEKI
          LR+++V S+    ++FEY D+DETI+  + GGIDA +KVS GWPL ++PLKL SLK+SD+  KG+SLSLICKVE++ANSLD+  R +LS F DA+EKI
Subjt:  CALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVEKI

Query:  MKEQMHLELQ
        + EQ   ELQ
Subjt:  MKEQMHLELQ

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.2e-7345.32Show/hide
Query:  DAYVERMKEELIAVEAESSKISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERT
        DAY+E ++ EL +VEAES+K+S EIE L ++   DS++L+ DLE L LSLD  +SQD EK+  N  S      M++    + + F++ EL++Q+E+    
Subjt:  DAYVERMKEELIAVEAESSKISNEIEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERT

Query:  LKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINAS
        LKSL++LD + K  D  EQVED + GLKV++   NF+RL L +++  L+ F    + + + EPSEL HELLI + + T ++   E+FP D+++ DII A+
Subjt:  LKSLQELDEIFKSLDVIEQVEDTIGGLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINAS

Query:  KSF-----------SNSSLEWFVRKVQDRIVLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVS
         SF           + SS++W V KVQD+I+   LR+  V S+    ++FEY D+DETI+  + GGIDA +KVS GWPL ++PLKL SLK+SD+  KG S
Subjt:  KSF-----------SNSSLEWFVRKVQDRIVLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVS

Query:  LSLICKVEKMANSLDVGLRHDLSSFADAVEKIMKEQMHLELQ
        LSLI K+E++ANSLD+  R +LS F DAVEKI+ +Q   EL+
Subjt:  LSLICKVEKMANSLDVGLRHDLSSFADAVEKIMKEQMHLELQ

AT3G24255.2 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.5e-7741.01Show/hide
Query:  SVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDD-------LDAYVERMKEELIAVEAESSKISNEI
        S+DLQ +R  + E +   R+  E+   +  S     ++++  L  E ++++ + ++ +VD LL +D         DAY+E ++ EL +VEAES+K+S EI
Subjt:  SVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDD-------LDAYVERMKEELIAVEAESSKISNEI

Query:  EVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQVEDTIG
        E L ++   DS++L+ DLE L LSLD  +SQD EK+  N  S      M++    + + F++ EL++Q+E+    LKSL++LD + K  D  EQVED + 
Subjt:  EVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQVEDTIG

Query:  GLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSF-----------SNSSLEWFVRK
        GLKV++   NF+RL L +++  L+ F    + + + EPSEL HELLI + + T ++   E+FP D+++ DII A+ SF           + SS++W V K
Subjt:  GLKVIDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSF-----------SNSSLEWFVRK

Query:  VQDRIVLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSF
        VQD+I+   LR+  V S+    ++FEY D+DETI+  + GGIDA +KVS GWPL ++PLKL SLK+SD+  KG SLSLI K+E++ANSLD+  R +LS F
Subjt:  VQDRIVLCALRRFVVKSANKSSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSF

Query:  ADAVEKIMKEQMHLELQ
         DAVEKI+ +Q   EL+
Subjt:  ADAVEKIMKEQMHLELQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAATTGATGGAAGCTACTCCGTCTGTGTCTCTAAGCGTCGATCTCCAAGCAGTTCGCAGTTGCATAAGCGAGATAGAAGAGTTGCAGAGATCTTTGGAG
GAAGATGAAGCTTATACGACGGATTCATTAGGTTCTGAGAAGTTACTGAAGGAGTGTTCTCTCCTTCTCGAGAGCAGACTACAGCAGACTCTGTCAGAATGGTCT
AACGTAGATAGTTTATTGGGGATTGATGATTTAGATGCATATGTTGAACGTATGAAAGAGGAACTTATCGCGGTGGAAGCTGAAAGCAGCAAAATCTCCAATGAG
ATCGAGGTTCTTAAGAGAACCAGTATAGAAGATTCGAATAAATTAAAGATGGATCTTGAAGTATTAAAATTGTCGTTAGATCGTTGTGCATCACAGGACCCAGAG
AAGGCAACATTTAATTGCTACTCTGTGAATGGTGAAGATCAAATGGACATGACAGTTGAGCGTGAATGCAATGCCTTTGAGGTATTGGAACTCGATAGCCAGATT
GAGAAGAACGAAAGAACTCTAAAATCTCTGCAGGAACTAGATGAGATATTTAAAAGTTTGGATGTTATTGAACAGGTCGAGGACACAATTGGTGGTCTGAAGGTC
ATTGATGTCACTGATAATTTCGTTCGATTATCATTACATTCTCATCTTCCAAACTTGGAAGAGTTTTCAAGCTTACAGAGACTTGAAGGTATGATTGAGCCATCC
GAATTGGATCATGAGTTGCTGATAGAAGTTTTGGAGGGGACAATGAAGTTAAAGAATGCTGAGATCTTTCCCGGTGATGTCCATTTGCACGATATCATCAACGCT
TCAAAGTCCTTCAGCAATTCTTCATTGGAATGGTTTGTGAGAAAAGTACAAGATAGGATTGTTTTATGTGCTCTTAGGCGATTTGTTGTGAAGAGTGCAAACAAA
TCGAGTCATTCCTTCGAGTATTTAGATCAAGACGAAACGATAATATGTACTATGATTGGAGGAATTGATGCAGTCATTAAGGTATCTCAAGGTTGGCCATTGTCC
GATTCTCCTTTGAAACTCATATCTCTCAAGAGCTCAGACCATTATATAAAAGGAGTTTCTTTAAGCCTCATTTGCAAGGTGGAGAAAATGGCAAATTCCTTGGAC
GTTGGTCTTCGCCACGATCTATCAAGCTTTGCAGATGCTGTTGAAAAGATAATGAAGGAGCAAATGCACTTAGAACTCCAATTTGACAGTGCTTTATGA
mRNA sequenceShow/hide mRNA sequence
GGTACCGAAGAATTCTCTCCCCTTCTCTCTCAATTTGAATTTTTGCGCGGACGAATCAGCGCGAGGAATCTCGTTCGGATTCTGTGCAAATTCCGGCAAAGGTAA
AGGAGAAAATAATGGCAGAATTGATGGAAGCTACTCCGTCTGTGTCTCTAAGCGTCGATCTCCAAGCAGTTCGCAGTTGCATAAGCGAGATAGAAGAGTTGCAGA
GATCTTTGGAGGAAGATGAAGCTTATACGACGGATTCATTAGGTTCTGAGAAGTTACTGAAGGAGTGTTCTCTCCTTCTCGAGAGCAGACTACAGCAGACTCTGT
CAGAATGGTCTAACGTAGATAGTTTATTGGGGATTGATGATTTAGATGCATATGTTGAACGTATGAAAGAGGAACTTATCGCGGTGGAAGCTGAAAGCAGCAAAA
TCTCCAATGAGATCGAGGTTCTTAAGAGAACCAGTATAGAAGATTCGAATAAATTAAAGATGGATCTTGAAGTATTAAAATTGTCGTTAGATCGTTGTGCATCAC
AGGACCCAGAGAAGGCAACATTTAATTGCTACTCTGTGAATGGTGAAGATCAAATGGACATGACAGTTGAGCGTGAATGCAATGCCTTTGAGGTATTGGAACTCG
ATAGCCAGATTGAGAAGAACGAAAGAACTCTAAAATCTCTGCAGGAACTAGATGAGATATTTAAAAGTTTGGATGTTATTGAACAGGTCGAGGACACAATTGGTG
GTCTGAAGGTCATTGATGTCACTGATAATTTCGTTCGATTATCATTACATTCTCATCTTCCAAACTTGGAAGAGTTTTCAAGCTTACAGAGACTTGAAGGTATGA
TTGAGCCATCCGAATTGGATCATGAGTTGCTGATAGAAGTTTTGGAGGGGACAATGAAGTTAAAGAATGCTGAGATCTTTCCCGGTGATGTCCATTTGCACGATA
TCATCAACGCTTCAAAGTCCTTCAGCAATTCTTCATTGGAATGGTTTGTGAGAAAAGTACAAGATAGGATTGTTTTATGTGCTCTTAGGCGATTTGTTGTGAAGA
GTGCAAACAAATCGAGTCATTCCTTCGAGTATTTAGATCAAGACGAAACGATAATATGTACTATGATTGGAGGAATTGATGCAGTCATTAAGGTATCTCAAGGTT
GGCCATTGTCCGATTCTCCTTTGAAACTCATATCTCTCAAGAGCTCAGACCATTATATAAAAGGAGTTTCTTTAAGCCTCATTTGCAAGGTGGAGAAAATGGCAA
ATTCCTTGGACGTTGGTCTTCGCCACGATCTATCAAGCTTTGCAGATGCTGTTGAAAAGATAATGAAGGAGCAAATGCACTTAGAACTCCAATTTGACAGTGCTT
TATGATGATCTTATTGGATATTTCAAATTTACAATCACGCCAATTGAACACAACGAGATCCTATATACAGGTAAGCAAACTGAACATCTATCTACTAATACAAGT
GCTCAGTAACTGATCATTTTTCATGCTGAAAATTTTCGCTGAACTGCTAATTGCTATAATATATATTCCTTTTTGTTTGTATAGATTAAAGACTTCGTTGCTCTG
TTGATTTATCATCATCATTATTATTATTGATAATTAGGATATCGGAAGCTGTATTTTTTGCATCTTGCTCATAGCCGTCCCAAAATTATCTAGAGAATGTTAGGA
ATCTCGAACCTCCATAATGCTATGATATTATCCACTTTGAGCATAAATCACGAACCTCCACAATAGTATGATATTGTCCACAATGGTATCATATTCCTTCTAAAT
GCTAGAAATCACGAGATCATTATAATTTACCAATTTTATTAAGTTTTGAATCTAAGGCTTAGAATTTGGGATCTTAGAAAACCATCCGAACAAAAATTCAAGCGA
TTGAGATATTATACATTTATTCTAGCCTG
Protein sequenceShow/hide protein sequence
MAELMEATPSVSLSVDLQAVRSCISEIEELQRSLEEDEAYTTDSLGSEKLLKECSLLLESRLQQTLSEWSNVDSLLGIDDLDAYVERMKEELIAVEAESSKISNE
IEVLKRTSIEDSNKLKMDLEVLKLSLDRCASQDPEKATFNCYSVNGEDQMDMTVERECNAFEVLELDSQIEKNERTLKSLQELDEIFKSLDVIEQVEDTIGGLKV
IDVTDNFVRLSLHSHLPNLEEFSSLQRLEGMIEPSELDHELLIEVLEGTMKLKNAEIFPGDVHLHDIINASKSFSNSSLEWFVRKVQDRIVLCALRRFVVKSANK
SSHSFEYLDQDETIICTMIGGIDAVIKVSQGWPLSDSPLKLISLKSSDHYIKGVSLSLICKVEKMANSLDVGLRHDLSSFADAVEKIMKEQMHLELQFDSAL