CuGenDBv2

Gene ID	CmaCh06G012430
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	60S ribosomal protein L13a
Genome location	Cma_Chr06:8287884..8289769
RNA-Seq Expression	CmaCh06G012430
Synteny	CmaCh06G012430
Gene Ontology terms	GO:0017148 - negative regulation of translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR005755 - Ribosomal protein L13, eukaryotic/archaeal IPR005822 - Ribosomal protein L13 IPR023563 - Ribosomal protein L13, conserved site IPR036899 - Ribosomal protein L13 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004133995.1 60S ribosomal protein L13a-2 [Cucumis sativus]

6.8e-103

97.47

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
        AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QA YEKKKQL KLRVKAEKVADEKLGPQLQVIAP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

XP_022147118.1 60S ribosomal protein L13a-4-like [Momordica charantia]

2.6e-102

95.96

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
        AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA YEKKKQL KLRVKAEKVADEKLGPQL+VIAP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

XP_022936364.1 60S ribosomal protein L13a-4-like [Cucurbita moschata]

4.3e-105

99.49

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
        AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

XP_022964267.1 60S ribosomal protein L13a-4 [Cucurbita moschata]

1.5e-102

96.46

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
        AYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA YEKKKQLNKLR+KAEKVA+EKLGPQL+VIAP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

XP_023521847.1 60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo]

2.1e-104

98.99

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
        AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L439 Uncharacterized protein

3.3e-103

97.47

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
        AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QA YEKKKQL KLRVKAEKVADEKLGPQLQVIAP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

A0A1S3AW63 60S ribosomal protein L13a-2-like

3.3e-103

97.47

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
        AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QA YEKKKQL KLRVKAEKVADEKLGPQLQVIAP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

A0A5A7U034 60S ribosomal protein L13a-4

3.3e-103

97.47

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
        AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QA YEKKKQL KLRVKAEKVADEKLGPQLQVIAP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

A0A6J1F834 60S ribosomal protein L13a-4-like

2.1e-105

99.49

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
        AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

A0A6J1ICM6 60S ribosomal protein L13a-4-like

2.1e-105

99.49

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
        AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

SwissProt top hits

e value

%identity

Alignment

O49885 60S ribosomal protein L13a

7.4e-92

83.33

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRL+SI+AKELLNGQKVV+VR EEICISGGLVRQKMKY+RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG  ALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
         YEG+PPP+DK KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIKELE+KRKER+Q VYE+KKQLNKLRVKAE+VA EKLG QL ++AP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

Q9FKC0 60S ribosomal protein L13a-4

2.8e-99

89.9

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        SKRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
         YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA  VYE+KKQLNKLRVKAEKVA+EKLG QL ++AP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

Q9LRX8 60S ribosomal protein L13a-2

2.6e-97

88.89

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        SKRVVVDARHHM GRL+SIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
         +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA+YE+KKQL KLR KAEKVA+EKLG QL V+A  KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

Q9SFU1 60S ribosomal protein L13a-1

2.6e-97

86.87

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRL+S++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
         +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQAVYE+KKQL+KLR KAEKVA+EKLG QL V+AP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

Q9SVR0 60S ribosomal protein L13a-3

1.7e-96

86.36

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVD RHHMLGRL+S  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
         +EG+PPPYDK+KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q +YE+KKQLNKLR KAEKVA+E+LG QL V+AP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

Arabidopsis top hits

e value

%identity

Alignment

AT3G07110.1 Ribosomal protein L13 family protein

1.9e-98

86.87

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVDARHHMLGRL+S++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
         +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQAVYE+KKQL+KLR KAEKVA+EKLG QL V+AP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

AT3G24830.1 Ribosomal protein L13 family protein

1.9e-98

88.89

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        SKRVVVDARHHM GRL+SIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
         +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA+YE+KKQL KLR KAEKVA+EKLG QL V+A  KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

AT4G13170.1 Ribosomal protein L13 family protein

1.2e-97

86.36

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        +KRVVVD RHHMLGRL+S  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
         +EG+PPPYDK+KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q +YE+KKQLNKLR KAEKVA+E+LG QL V+AP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

AT5G48760.1 Ribosomal protein L13 family protein

2.0e-100

89.9

Show/hide

Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        SKRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
         YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA  VYE+KKQLNKLRVKAEKVA+EKLG QL ++AP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

AT5G48760.2 Ribosomal protein L13 family protein

2.0e-100

89.9

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Query:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK
        SKRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK
Subjt:  SKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLK

Query:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY
         YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA  VYE+KKQLNKLRVKAEKVA+EKLG QL ++AP KY
Subjt:  AYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVKAEKVADEKLGPQLQVIAPTKY

Sequences

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CDS sequence

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GATCAAAAATGGTGTCGGGTTCTGGAATCTGCGCCAAGCGCGTCGTCGTTGACGCCAGGCACCACATGCTCGGGAGGCTGTCTTCTATCATCGCCAAGGAGCAAG
CGCGTCGTCGTTGACGCCAGGCACCACATGCTCGGGAGGCTGTCTTCTATCATCGCCAAGGAGCTTCTCAATGGGCAGAAGGTGGTTGTTGTTCGATGTGAAGAA
ATTTGCATTTCTGGAGGATTGGTTCGTCAGAAGATGAAGTACATGAGATTCTTGAGGAAGCGTATGAATACCAAGCCATCTCATGGTCCCATTCATTTCCGTGCT
CCTGCCAAGATCCTTTGGCGAACAATCCGTGGTATGATCCCACACAAGACAAAGCGTGGAGCTGCTGCTCTTGCTCGTTTGAAGGCATATGAAGGCGTTCCACCT
CCATATGACAAGATGAAAAGGATGGTCATCCCCGACGCTCTCAAGGTTTTGAGGCTTCAAGCTGGACACAAATACTGCTTGTTGGGTAGACTCTCATCTGAAGTG
GGATGGAACCACTATGACACTATCAAGGAGCTTGAAAGGAAGAGGAAGGAGAGGGCTCAAGCCGTGTACGAGAAGAAGAAGCAGTTGAATAAGTTAAGGGTCAAA
GCCGAGAAGGTTGCAGACGAGAAGCTCGGTCCCCAGTTGCAAGTAATAGCCCCGACTAAATACTAG

mRNA sequence

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Protein sequence

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DQKWCRVLESAPSASSLTPGTTCSGGCLLSSPRSKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRA
PAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLNKLRVK
AEKVADEKLGPQLQVIAPTKY

CmaCh06G012430 (gene) of Cucurbita maxima (Rimu) v1.1 genome