; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G015540 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G015540
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr06:9721755..9728126
RNA-Seq ExpressionCmaCh06G015540
SyntenyCmaCh06G015540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597564.1 putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2092.86Show/hide
Query:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG
        MKGLHSSGLRATPVLRNRPQEAYSTINEYRR+NPSN VHRTSKH+PLNNTE PSRG
Subjt:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG

KAG7029008.1 putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-2091.07Show/hide
Query:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG
        MKGLHSSGLRATPVLRN+PQEAYSTINEYRR+NPSN VHRTSKH+PLNNTE PSRG
Subjt:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG

XP_022934625.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucurbita moschata]1.6e-2092.86Show/hide
Query:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG
        MKGLHSSGLRATPVLRNRPQEAYSTINEYRR+NPSN VHRTSKH+PLNNTE PSRG
Subjt:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG

XP_022975218.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucurbita maxima]4.9e-2298.21Show/hide
Query:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG
        MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSN VHRTSKHSPLNNTEGPSRG
Subjt:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG

XP_023539285.1 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Cucurbita pepo subsp. pepo]1.2e-2092.86Show/hide
Query:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG
        MKGLHSSGLRATPVLRNRPQ+AYSTINEYRRQNPSN VHRTSKH+PLNNTE PSRG
Subjt:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG

TrEMBL top hitse value%identityAlignment
A0A0A0L5W1 Uncharacterized protein3.2e-1166.07Show/hide
Query:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG
        M+G  SS  RATPVLRNRP +AY+ IN++RRQ PSN++ RTSK SP NN E PSRG
Subjt:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG

A0A1S3AXI6 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial6.3e-0757.89Show/hide
Query:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNN-TEGPSRG
        M+G  S   R TPVLRNRP +AY+ IN +RRQ PS+++ RTSK S  NN  E PSRG
Subjt:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNN-TEGPSRG

A0A5A7U127 Putative pentatricopeptide repeat-containing protein6.3e-0757.89Show/hide
Query:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNN-TEGPSRG
        M+G  S   R TPVLRNRP +AY+ IN +RRQ PS+++ RTSK S  NN  E PSRG
Subjt:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNN-TEGPSRG

A0A6J1F885 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial7.7e-2192.86Show/hide
Query:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG
        MKGLHSSGLRATPVLRNRPQEAYSTINEYRR+NPSN VHRTSKH+PLNNTE PSRG
Subjt:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG

A0A6J1IIL6 putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial2.4e-2298.21Show/hide
Query:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG
        MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSN VHRTSKHSPLNNTEGPSRG
Subjt:  MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGCTTCATTCTTCGGGTCTCAGGGCGACGCCTGTTCTAAGAAATCGACCTCAAGAAGCTTACTCCACGATTAACGAGTATCGGAGACAAAACCCTTCG
AATGCAGTCCACAGAACTTCAAAACACAGCCCCTTAAACAACACTGAAGGGCCTTCAAGAGGTTATGTGGATAACGTTGCATGTGCAATGGGTGCCACATGTTTT
GACCCCGTTGAAACTTTCTCCAAGAACTTGCTGTGTTTGGATCTTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGGCTTCATTCTTCGGGTCTCAGGGCGACGCCTGTTCTAAGAAATCGACCTCAAGAAGCTTACTCCACGATTAACGAGTATCGGAGACAAAACCCTTCG
AATGCAGTCCACAGAACTTCAAAACACAGCCCCTTAAACAACACTGAAGGGCCTTCAAGAGGTTATGTGGATAACGTTGCATGTGCAATGGGTGCCACATGTTTT
GACCCCGTTGAAACTTTCTCCAAGAACTTGCTGTGTTTGGATCTTGTCTAGACGCTGTCCATGGGATAGAGGGATAGCTATTCTCCATATTGGGGGGTGAATTTA
GTTGGCGCTCGAGCGAGTGGTTGGATTATTTCACTCGATCATAATGTCTCAACGTGACAGCAAAACGCCCTGACATCACGAGTCGATCAGTTTGCATCTCAGCCA
AGTTTGCTTCGACGTGATGAGCTCGACCCGAGCGGTAGGAAATTAAAAGAAGGCTGCAAAACTTTGTAAAAACTTCTATCAAACTACAAAGTTTCTTATCCATGG
AGATGGTTTGGCTGAATCTAACCCCCCATATGTTTTGAG
Protein sequenceShow/hide protein sequence
MKGLHSSGLRATPVLRNRPQEAYSTINEYRRQNPSNAVHRTSKHSPLNNTEGPSRGYVDNVACAMGATCFDPVETFSKNLLCLDLV