; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh06G016580 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh06G016580
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionDuplicated homeodomain-like superfamily protein
Genome locationCma_Chr06:10258163..10259349
RNA-Seq ExpressionCmaCh06G016580
SyntenyCmaCh06G016580
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8692976.1 Transcription factor DIVARICATA [Hibiscus syriacus]2.0e-1642.86Show/hide
Query:  PTPMENSGFLSDVVNFCSNNQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRK
        PT  ++SG     ++  SNNQ++   + + + G S R +   WT +EH+LFL+G++ +G G+W+SI+  VV+T+T TQVASHAQK+F RQ   K++RKR 
Subjt:  PTPMENSGFLSDVVNFCSNNQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRK

Query:  SIHDIDTVDPELLS-EVYARLESQPETRTRSRP
        SIHDI TVD  ++   V   + S P    R  P
Subjt:  SIHDIDTVDPELLS-EVYARLESQPETRTRSRP

TYK16992.1 myb-like protein J [Cucumis melo var. makuwa]1.5e-1654.02Show/hide
Query:  QSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTR-QQIPKEQRKRKSIHDIDTVDPELLSEVYARL
        +++++R  W++ EH+LFL GM + G   WK IA+ VV+TKTH QVASHAQK+F    ++ K +RKR SIHDI TV+PE L+EV A L
Subjt:  QSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTR-QQIPKEQRKRKSIHDIDTVDPELLSEVYARL

XP_023522314.1 transcription factor SRM1-like [Cucurbita pepo subsp. pepo]1.7e-8781.57Show/hide
Query:  MLFCAPSTYNNLSPLAPAPAPAPTPTPTPTPMENSGFLSDVVNFCSNNQMHRVAANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLT
        M FCAPSTYNNLSPLA A          PTPME++GFLSDV+NFCSNN  H VAANNGRV QSS+ RIIWT+DEHKLFLVGMAIFGSGNWKSIANKVVLT
Subjt:  MLFCAPSTYNNLSPLAPAPAPAPTPTPTPTPMENSGFLSDVVNFCSNNQMHRVAANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLT

Query:  KTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLESQPETRTRSRPRPRPRPPPTPPLPSLTNYSPLRMDPDPTQPYEQFNNYVPNV
        KTH QVASHAQKF TRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLESQPETRTRS    RP PPP PP P LTNYSP RMDP+PTQPYE FNNYVPNV
Subjt:  KTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLESQPETRTRSRPRPRPRPPPTPPLPSLTNYSPLRMDPDPTQPYEQFNNYVPNV

Query:  EQLPLPSQPEFVHNQNV
        EQ  LP QP FVHNQN+
Subjt:  EQLPLPSQPEFVHNQNV

XP_039012789.1 transcription factor DIVARICATA-like [Hibiscus syriacus]1.2e-1646.02Show/hide
Query:  PTPMENSGFLSDVVNFCSNNQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRK
        PT  ++SG     ++  SNNQ++   + + + G S R +   WT +EH+LFL+G++ +G G+W+SI+  VV+T+T TQVASHAQK+F RQ   K++RKR 
Subjt:  PTPMENSGFLSDVVNFCSNNQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRK

Query:  SIHDIDTVDPELL
        SIHDI TVD  ++
Subjt:  SIHDIDTVDPELL

XP_039032769.1 transcription factor DIVARICATA-like [Hibiscus syriacus]2.0e-1654.35Show/hide
Query:  SNNQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVD
        SNNQ++   + + + G S R +   WT +EHKLFL+G++ FG G+W+SI+  VV+T+T TQVASHAQK+F RQ   K++RKR SIHDI TVD
Subjt:  SNNQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVD

TrEMBL top hitse value%identityAlignment
A0A5B6UEW1 Myb-like protein J1.6e-1643.97Show/hide
Query:  SNNQMHRVAANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPELL-----
        S+NQ+  V+ +        +    WT +EHKLFL+G+  FG G+W+SI+  VV+T+T TQVASHAQK+F RQ   K++RKR SIHDI TVD + +     
Subjt:  SNNQMHRVAANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPELL-----

Query:  ----SEVYARLESQPE
            SE Y  ++  P+
Subjt:  ----SEVYARLESQPE

A0A5D3CZL0 Myb-like protein J7.4e-1754.02Show/hide
Query:  QSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTR-QQIPKEQRKRKSIHDIDTVDPELLSEVYARL
        +++++R  W++ EH+LFL GM + G   WK IA+ VV+TKTH QVASHAQK+F    ++ K +RKR SIHDI TV+PE L+EV A L
Subjt:  QSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTR-QQIPKEQRKRKSIHDIDTVDPELLSEVYARL

A0A6A2YB53 Transcription factor DIVARICATA9.7e-1754.35Show/hide
Query:  SNNQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVD
        SNNQ++   + + + G S R +   WT +EHKLFL+G++ FG G+W+SI+  VV+T+T TQVASHAQK+F RQ   K++RKR SIHDI TVD
Subjt:  SNNQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVD

A0A6A2ZN51 Transcription factor DIVARICATA9.7e-1742.86Show/hide
Query:  PTPMENSGFLSDVVNFCSNNQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRK
        PT  ++SG     ++  SNNQ++   + + + G S R +   WT +EH+LFL+G++ +G G+W+SI+  VV+T+T TQVASHAQK+F RQ   K++RKR 
Subjt:  PTPMENSGFLSDVVNFCSNNQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRK

Query:  SIHDIDTVDPELLS-EVYARLESQPETRTRSRP
        SIHDI TVD  ++   V   + S P    R  P
Subjt:  SIHDIDTVDPELLS-EVYARLESQPETRTRSRP

A0A7J7D8X1 Transcription factor DIVARICATA2.2e-1650Show/hide
Query:  NQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVD
        +++H+++  + +  ++ R +   WT +EHKLFL+G+  FG G+W+SI+  VV+T+T TQVASHAQK+F RQ   K++RKR SIHDI TVD
Subjt:  NQMHRVAANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVD

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS12.5e-1451.35Show/hide
Query:  QSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTV
        Q  R  I WT +EH+LFL+G+  FG G+W+SI+   V+++T TQVASHAQK+F R       R+R SIHDI +V
Subjt:  QSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTV

Q8LH59 Transcription factor MYBS12.5e-1451.35Show/hide
Query:  QSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTV
        Q  R  I WT +EH+LFL+G+  FG G+W+SI+   V+++T TQVASHAQK+F R       R+R SIHDI +V
Subjt:  QSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTV

Q8S9H7 Transcription factor DIVARICATA6.2e-1339.32Show/hide
Query:  ANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLESQPET
        +++GR  +  R + + WT +EHKLFL+G+  +G G+W++I+   V+T+T TQVASHAQK+F RQ    + ++R SIHDI TV+   LS+           
Subjt:  ANNGRVGQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLESQPET

Query:  RTRSRPRPRPRPPPTPP
             P P  + PP+ P
Subjt:  RTRSRPRPRPRPPPTPP

Q9FKF9 Probable transcription factor At5g616204.2e-0929.59Show/hide
Query:  DVVNFCSNNQMHRVAANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPEL
        D   + S+ Q+H   +  G+     +    WT +EH+ FL+G+   G G+W+ IA   V T+T TQVASHAQK+F R  +  ++++R S+ DI       
Subjt:  DVVNFCSNNQMHRVAANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPEL

Query:  LSEVYARLESQPETRTRSRPRPRPRPPPTPPLPSLTNYSPLRMDPDPTQPYEQFNN----YVPNVEQLP
               LE Q E + R+      + PP  P+  +    P+      T+   +F N    Y+P  + +P
Subjt:  LSEVYARLESQPETRTRSRPRPRPRPPPTPPLPSLTNYSPLRMDPDPTQPYEQFNN----YVPNVEQLP

Q9FNN6 Transcription factor SRM12.3e-1549.38Show/hide
Query:  ANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTV
        A   +  Q  R  I WT DEH+LFL+G+  +G G+W+SI+   V+T+T TQVASHAQK+F R     + R+R SIHDI +V
Subjt:  ANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTV

Arabidopsis top hitse value%identityAlignment
AT1G49010.1 Duplicated homeodomain-like superfamily protein2.8e-1633.72Show/hide
Query:  AANNGRVG-----QSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLE
        ++N GR G     Q  R  I WT +EH+LFL+G+  FG G+W+SI+   V+++T TQVASHAQK+F R       R+R SIHDI TV+ +  +      +
Subjt:  AANNGRVG-----QSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLE

Query:  SQPETRTRSRPRPRPRPPP----TPPLPSLTNYSPLRMDPDPTQPYEQFNNYVPNVEQLPLPSQPEFVHNQN
         Q      ++P+P+P+P P     P +  L  Y    +      P +   + V     LP P      H+ +
Subjt:  SQPETRTRSRPRPRPRPPP----TPPLPSLTNYSPLRMDPDPTQPYEQFNNYVPNVEQLPLPSQPEFVHNQN

AT5G01200.1 Duplicated homeodomain-like superfamily protein1.2e-1453.73Show/hide
Query:  WTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVD
        WT DEH  FL+G+  +G G+W++IA   V T+T TQVASHAQK+F RQ    + ++R SIHDI TV+
Subjt:  WTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVD

AT5G04760.1 Duplicated homeodomain-like superfamily protein9.2e-2058.75Show/hide
Query:  GQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPEL
        G+S R R   WT +EHKLFL+G+  +G G+W+SI+  VV+T+T TQVASHAQK+F RQ   K++RKR SIHDI TVD  L
Subjt:  GQSSRMR-IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPEL

AT5G08520.1 Duplicated homeodomain-like superfamily protein1.6e-1649.38Show/hide
Query:  ANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTV
        A   +  Q  R  I WT DEH+LFL+G+  +G G+W+SI+   V+T+T TQVASHAQK+F R     + R+R SIHDI +V
Subjt:  ANNGRVGQSSRMRIIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTV

AT5G58900.1 Homeodomain-like transcriptional regulator1.6e-1644.57Show/hide
Query:  HRVAANNGRVGQSSRMR----IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPE
        H+V     + G+S  +     + WT +EHKLFL+G+  +G G+W++I+   V+T+T TQVASHAQK+F RQ    + ++R SIHDI TV+ E
Subjt:  HRVAANNGRVGQSSRMR----IIWTVDEHKLFLVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATACCGATTAGTAATGTGGTGCTTCAGCAGTCGCCGACGACAATGACGACGCTACCGGAAAATCAATCGATGAGATTCGAGAATGACTTTAGGCTCGCCGATCC
ATCTATGAGTGAGGCGGAGATTTATCATAACGCTTATCTGAATCTATATAACGAAGATTTGTCTCCGTTCGAGACTTCTATCAACGGCGGCTATGAGGCAGAGTTTTATT
GTCCTAATGAAACGATGCCGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTTCGGCTCCGGCTCCAACTCCGACGTTTTATTGCCCTAATTATAGCTATGAAACG
ATGTCGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTCCAGCTCCAGCTCCGGCTCCGGCGTTTTATTGCCCTAATTATAGCTATGAAACGATGCTGTTTTGTGC
TCCTTCCACTTACAATAACTTATCTCCTTTGGCTCCGGCTCCGGCTCCGGCTCCGACTCCGACTCCGACTCCGACTCCAATGGAGAATTCTGGTTTTCTTTCAGATGTCG
TTAATTTTTGCTCCAATAATCAGATGCATCGGGTAGCGGCAAACAATGGCAGAGTCGGCCAATCATCAAGAATGAGGATAATTTGGACAGTTGACGAGCACAAGTTATTT
CTGGTAGGAATGGCGATATTTGGCTCGGGTAATTGGAAAAGCATCGCAAATAAAGTCGTGCTTACAAAAACTCACACGCAAGTAGCTAGTCACGCTCAAAAGTTTTTCAC
TCGGCAACAAATACCGAAAGAACAACGAAAAAGAAAGAGTATTCATGATATCGATACGGTCGATCCCGAATTATTGTCGGAGGTGTATGCTCGTTTAGAATCACAACCAG
AAACACGAACACGATCACGACCACGACCACGACCACGACCACCACCGACACCGCCACTGCCATCGTTGACAAACTATTCCCCGTTGCGCATGGATCCAGATCCGACCCAA
CCATATGAGCAATTCAATAATTACGTGCCCAATGTTGAACAGCTACCGCTGCCATCGCAGCCAGAATTTGTGCATAACCAAAACGTAAACTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATACCGATTAGTAATGTGGTGCTTCAGCAGTCGCCGACGACAATGACGACGCTACCGGAAAATCAATCGATGAGATTCGAGAATGACTTTAGGCTCGCCGATCC
ATCTATGAGTGAGGCGGAGATTTATCATAACGCTTATCTGAATCTATATAACGAAGATTTGTCTCCGTTCGAGACTTCTATCAACGGCGGCTATGAGGCAGAGTTTTATT
GTCCTAATGAAACGATGCCGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTTCGGCTCCGGCTCCAACTCCGACGTTTTATTGCCCTAATTATAGCTATGAAACG
ATGTCGTTTTGTGCTCCTTCCACTTACAATAACTTATCTCCTCCAGCTCCAGCTCCGGCTCCGGCGTTTTATTGCCCTAATTATAGCTATGAAACGATGCTGTTTTGTGC
TCCTTCCACTTACAATAACTTATCTCCTTTGGCTCCGGCTCCGGCTCCGGCTCCGACTCCGACTCCGACTCCGACTCCAATGGAGAATTCTGGTTTTCTTTCAGATGTCG
TTAATTTTTGCTCCAATAATCAGATGCATCGGGTAGCGGCAAACAATGGCAGAGTCGGCCAATCATCAAGAATGAGGATAATTTGGACAGTTGACGAGCACAAGTTATTT
CTGGTAGGAATGGCGATATTTGGCTCGGGTAATTGGAAAAGCATCGCAAATAAAGTCGTGCTTACAAAAACTCACACGCAAGTAGCTAGTCACGCTCAAAAGTTTTTCAC
TCGGCAACAAATACCGAAAGAACAACGAAAAAGAAAGAGTATTCATGATATCGATACGGTCGATCCCGAATTATTGTCGGAGGTGTATGCTCGTTTAGAATCACAACCAG
AAACACGAACACGATCACGACCACGACCACGACCACGACCACCACCGACACCGCCACTGCCATCGTTGACAAACTATTCCCCGTTGCGCATGGATCCAGATCCGACCCAA
CCATATGAGCAATTCAATAATTACGTGCCCAATGTTGAACAGCTACCGCTGCCATCGCAGCCAGAATTTGTGCATAACCAAAACGTAAACTACTGA
Protein sequenceShow/hide protein sequence
MAIPISNVVLQQSPTTMTTLPENQSMRFENDFRLADPSMSEAEIYHNAYLNLYNEDLSPFETSINGGYEAEFYCPNETMPFCAPSTYNNLSPSAPAPTPTFYCPNYSYET
MSFCAPSTYNNLSPPAPAPAPAFYCPNYSYETMLFCAPSTYNNLSPLAPAPAPAPTPTPTPTPMENSGFLSDVVNFCSNNQMHRVAANNGRVGQSSRMRIIWTVDEHKLF
LVGMAIFGSGNWKSIANKVVLTKTHTQVASHAQKFFTRQQIPKEQRKRKSIHDIDTVDPELLSEVYARLESQPETRTRSRPRPRPRPPPTPPLPSLTNYSPLRMDPDPTQ
PYEQFNNYVPNVEQLPLPSQPEFVHNQNVNY