; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh07G003280 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh07G003280
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionchaperonin-like RBCX protein 1, chloroplastic
Genome locationCma_Chr07:1429497..1430768
RNA-Seq ExpressionCmaCh07G003280
SyntenyCmaCh07G003280
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0009409 - response to cold (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0015977 - carbon fixation (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0110102 - chloroplast ribulose bisphosphate carboxylase complex assembly (biological process)
GO:0033314 - mitotic DNA replication checkpoint (biological process)
GO:0061077 - chaperone-mediated protein folding (biological process)
GO:0005664 - nuclear origin of replication recognition complex (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0044183 - protein folding chaperone (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0003688 - DNA replication origin binding (molecular function)
InterPro domainsIPR038052 - Chaperonin-like RbcX superfamily
IPR003435 - Chaperonin-like RbcX


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594678.1 Chaperonin-like RBCX protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-9097.67Show/hide
Query:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH
        MESCARILSPTHFPSLFP PNLNRSNFNPVWPKK  ASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAH ELMEFLDRH
Subjt:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH

Query:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
        SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
Subjt:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK

KAG7026647.1 Chaperonin-like RBCX protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.5e-8685.28Show/hide
Query:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLE-----------------
        MESCARILSPTHFPSLFP PNLNRSNFNPVWPKK  ASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLE                 
Subjt:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLE-----------------

Query:  --------SYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
                SYNPEAH ELMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
Subjt:  --------SYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK

XP_022926897.1 chaperonin-like RBCX protein 1, chloroplastic [Cucurbita moschata]1.5e-9198.26Show/hide
Query:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH
        MESCARILSPTHFPSLFP PNLNRSNFNPVWPKK EASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAH ELMEFLDRH
Subjt:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH

Query:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
        SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
Subjt:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK

XP_023003335.1 chaperonin-like RBCX protein 1, chloroplastic [Cucurbita maxima]9.6e-94100Show/hide
Query:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH
        MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH
Subjt:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH

Query:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
        SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
Subjt:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK

XP_023518339.1 chaperonin-like RBCX protein 1, chloroplastic [Cucurbita pepo subsp. pepo]6.9e-9297.67Show/hide
Query:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH
        MESCARILSPTHFPS+FPLPNLNR NFNPVWP+KPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAH ELMEFLDRH
Subjt:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH

Query:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
        SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
Subjt:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK

TrEMBL top hitse value%identityAlignment
A0A1S3B054 uncharacterized protein LOC1034846356.1e-7886.71Show/hide
Query:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH
        MES ARILSPT FPS+F LPNLNR N  PV P KP ASKS+RLHC KMYVPGFGEASPE+KAA+NLHNFFTYVAVRIVTAQLESYNPEA+ ELMEFLDRH
Subjt:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH

Query:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP-DAEK
        SLNDGDKFL++LMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLA KMVGESNTR+MREY+TETSP D EK
Subjt:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP-DAEK

A0A5D3CNU4 Chaperonin-like RBCX protein 16.1e-7886.71Show/hide
Query:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH
        MES ARILSPT FPS+F LPNLNR N  PV P KP ASKS+RLHC KMYVPGFGEASPE+KAA+NLHNFFTYVAVRIVTAQLESYNPEA+ ELMEFLDRH
Subjt:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH

Query:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP-DAEK
        SLNDGDKFL++LMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLA KMVGESNTR+MREY+TETSP D EK
Subjt:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP-DAEK

A0A6J1BTL5 chaperonin-like RBCX protein 1, chloroplastic9.4e-7988.24Show/hide
Query:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASK--SLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLD
        MES AR+LSPT FPSLFPLPNLNRS   P+WP KP+ASK   L+L CHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIV AQLESYNPEAH ELMEFLD
Subjt:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASK--SLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLD

Query:  RHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP
        RHSLNDGDKFL++LMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKM  ESNTRLMREYVTETSP
Subjt:  RHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSP

A0A6J1EFL9 chaperonin-like RBCX protein 1, chloroplastic7.4e-9298.26Show/hide
Query:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH
        MESCARILSPTHFPSLFP PNLNRSNFNPVWPKK EASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAH ELMEFLDRH
Subjt:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH

Query:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
        SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
Subjt:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK

A0A6J1KRH1 chaperonin-like RBCX protein 1, chloroplastic4.7e-94100Show/hide
Query:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH
        MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH
Subjt:  MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRH

Query:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
        SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK
Subjt:  SLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK

SwissProt top hitse value%identityAlignment
Q44177 RuBisCO chaperone RbcX6.6e-0533.68Show/hide
Query:  KAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESN
        + A  L ++ TY AVR+++ QL   NP     L EF  RH + + D +L  +M E   +K L LRIL VR    +   E+  L  +    + +SN
Subjt:  KAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESN

Q55670 RuBisCO chaperone RbcX9.6e-0431.53Show/hide
Query:  KNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESN---TRLMR
        K L ++ TY AV  + ++L   NP     L ++L  HS+ +G+ FL+ L+ E   +K L LRIL VR    ++    D L  +    + ESN    R + 
Subjt:  KNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESN---TRLMR

Query:  EYVTETSPDAE
        E +T T  + +
Subjt:  EYVTETSPDAE

Q94AU9 Chaperonin-like RBCX protein 1, chloroplastic3.3e-5269.93Show/hide
Query:  SNFNPVWPKKPEAS----------KSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMR
        S  NP + K+P  S          K  R+  +KMYVPGFGEASPEAKAAK+LH+FFTYVAVRIV+AQLESYNPEA+ EL EFLD +S++DGDKF + LMR
Subjt:  SNFNPVWPKKPEAS----------KSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMR

Query:  ESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETS
         SSRH +LALRILEVRSAYCKNDFEWDN+KRLA K V +SNTRLMREYV ETS
Subjt:  ESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETS

Arabidopsis top hitse value%identityAlignment
AT4G04330.1 Chaperonin-like RbcX protein2.3e-5369.93Show/hide
Query:  SNFNPVWPKKPEAS----------KSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMR
        S  NP + K+P  S          K  R+  +KMYVPGFGEASPEAKAAK+LH+FFTYVAVRIV+AQLESYNPEA+ EL EFLD +S++DGDKF + LMR
Subjt:  SNFNPVWPKKPEAS----------KSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMR

Query:  ESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETS
         SSRH +LALRILEVRSAYCKNDFEWDN+KRLA K V +SNTRLMREYV ETS
Subjt:  ESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETS

AT5G19855.1 Chaperonin-like RbcX protein2.6e-0434.62Show/hide
Query:  KNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVR-SAYCKNDFEWDNLKRLASKMVGESNTRLMREY
        K + N+FTY AVR V  QL   NP  +T     +  +   DG +FL  L +ES   + LA R++  R   Y K   + D+ K    + + + N  LMRE 
Subjt:  KNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLSNLMRESSRHKSLALRILEVR-SAYCKNDFEWDNLKRLASKMVGESNTRLMREY

Query:  VTET
        + ET
Subjt:  VTET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCATGTGCAAGGATTCTCTCCCCTACTCACTTCCCTTCTCTTTTCCCACTGCCCAATTTAAACAGAAGCAATTTCAATCCAGTTTGGCCAAAAAAGCCAGAAGC
CTCCAAGTCTTTGCGCTTGCATTGCCATAAGATGTATGTCCCCGGGTTTGGAGAAGCGTCGCCCGAAGCGAAGGCAGCCAAGAATCTGCACAATTTCTTCACGTATGTTG
CTGTTAGGATCGTGACGGCGCAGCTTGAGAGCTACAATCCAGAGGCGCATACAGAATTAATGGAGTTTCTTGATAGGCATTCACTGAACGATGGGGACAAGTTCCTGAGC
AATTTGATGCGGGAATCTTCAAGGCATAAGAGTCTCGCATTGCGCATACTAGAGGTTCGATCTGCATACTGCAAAAACGATTTCGAATGGGACAACCTCAAGCGATTAGC
TTCCAAAATGGTGGGTGAATCTAACACGAGACTGATGAGGGAATATGTGACAGAGACGAGTCCAGATGCCGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
AGTGGTTATTTATGTGGTTTGAATGAACCTCCTTTTTGTATTTTCAAGAAAGCTCGAGGCAAAATATCTCTCTCTCGCTCTCTCTGGTTTCAGTTTTCTTGTGAAGCAGT
TCGATAAAGCTCGAGGCCATCTATGGAATCATGTGCAAGGATTCTCTCCCCTACTCACTTCCCTTCTCTTTTCCCACTGCCCAATTTAAACAGAAGCAATTTCAATCCAG
TTTGGCCAAAAAAGCCAGAAGCCTCCAAGTCTTTGCGCTTGCATTGCCATAAGATGTATGTCCCCGGGTTTGGAGAAGCGTCGCCCGAAGCGAAGGCAGCCAAGAATCTG
CACAATTTCTTCACGTATGTTGCTGTTAGGATCGTGACGGCGCAGCTTGAGAGCTACAATCCAGAGGCGCATACAGAATTAATGGAGTTTCTTGATAGGCATTCACTGAA
CGATGGGGACAAGTTCCTGAGCAATTTGATGCGGGAATCTTCAAGGCATAAGAGTCTCGCATTGCGCATACTAGAGGTTCGATCTGCATACTGCAAAAACGATTTCGAAT
GGGACAACCTCAAGCGATTAGCTTCCAAAATGGTGGGTGAATCTAACACGAGACTGATGAGGGAATATGTGACAGAGACGAGTCCAGATGCCGAAAAGTGAGGAAATTCT
GCACCTTCTGTTTTTGCAATTATTATACATAAATTCAGTGTATTTATAATATGATCATGCCACTCCACTTGTTGGGGCTTTGTTCCAAACAAAAATTGGCAAACTCGATG
ATGGAAATATATACAGATTAAATTTTGTTGCGAGTTA
Protein sequenceShow/hide protein sequence
MESCARILSPTHFPSLFPLPNLNRSNFNPVWPKKPEASKSLRLHCHKMYVPGFGEASPEAKAAKNLHNFFTYVAVRIVTAQLESYNPEAHTELMEFLDRHSLNDGDKFLS
NLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLASKMVGESNTRLMREYVTETSPDAEK