; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh07G005200 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh07G005200
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionE3 ubiquitin-protein ligase RHA2B-like
Genome locationCma_Chr07:2245525..2246761
RNA-Seq ExpressionCmaCh07G005200
SyntenyCmaCh07G005200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036272.1 putative E3 ubiquitin-protein ligase RHA2B [Cucumis melo var. makuwa]3.0e-7692.21Show/hide
Query:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTA F TLL+LE VIL+RTIFGLRPN DKRVI TAQFLKLIE+KNPTIRFSNK+T S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
        CLDNWLKLCFATCPLCR KVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
Subjt:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG

XP_008440648.1 PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Cucumis melo]1.5e-7592.16Show/hide
Query:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTA F TLL+LE VIL+RTIFGLRPN DKRVI TAQFLKLIE+KNPTIRFSNK+T S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
        CLDNWLKLCFATCPLCR KVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
Subjt:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH

XP_022963436.1 E3 ubiquitin-protein ligase RHA2B-like isoform X1 [Cucurbita moschata]7.5e-8097.4Show/hide
Query:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTA F TLLILELVILVRTIFGLRPN DKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
        CLDNWLKLCFATCPLCR KVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
Subjt:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG

XP_023003552.1 E3 ubiquitin-protein ligase RHA2B-like isoform X1 [Cucurbita maxima]3.3e-83100Show/hide
Query:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
        CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
Subjt:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG

XP_038883588.1 E3 ubiquitin-protein ligase RHA2B-like [Benincasa hispida]6.0e-7792.86Show/hide
Query:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTA F TLL+LE VIL+RTIFGLRPN DKRV+ TAQFLKLIEEKNPTIRFSNK+TSS ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
        CLDNWLKLCFATCPLCR KVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
Subjt:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG

TrEMBL top hitse value%identityAlignment
A0A0A0KM08 RING-type domain-containing protein4.2e-7691.56Show/hide
Query:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTA F TLL+LE VIL+RTIFGLRPN DKRVI TAQF KLIE+KNPTIRFSNK+T S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
        CLDNWLKLCFATCPLCR KVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
Subjt:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG

A0A1S3B160 probable E3 ubiquitin-protein ligase RHA2B7.1e-7692.16Show/hide
Query:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTA F TLL+LE VIL+RTIFGLRPN DKRVI TAQFLKLIE+KNPTIRFSNK+T S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
        CLDNWLKLCFATCPLCR KVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH
Subjt:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALH

A0A5A7SYH1 Putative E3 ubiquitin-protein ligase RHA2B1.4e-7692.21Show/hide
Query:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTA F TLL+LE VIL+RTIFGLRPN DKRVI TAQFLKLIE+KNPTIRFSNK+T S ADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
        CLDNWLKLCFATCPLCR KVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
Subjt:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG

A0A6J1HG49 E3 ubiquitin-protein ligase RHA2B-like isoform X13.7e-8097.4Show/hide
Query:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTA F TLLILELVILVRTIFGLRPN DKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
        CLDNWLKLCFATCPLCR KVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
Subjt:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG

A0A6J1KMW2 E3 ubiquitin-protein ligase RHA2B-like isoform X11.6e-83100Show/hide
Query:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
        MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD
Subjt:  MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKD

Query:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
        CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG
Subjt:  CLDNWLKLCFATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHG

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING17.7e-1140.58Show/hide
Query:  EKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDD
        E  P +  +    +S  +QCAVC+ +FEEG + +++ C H +HKDCL  WL+L   +CP+CR ++  DD
Subjt:  EKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDD

Q8LPN7 E3 ubiquitin-protein ligase RING1-like7.0e-1243.94Show/hide
Query:  PTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDD
        PT++ +  +  S  +QCAVC+ EFE+G  V+++ C H FH+DCL  WL+L   +CP+CR ++  DD
Subjt:  PTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDD

Q9XF92 Brassinosteroid-responsive RING protein 17.7e-1145.45Show/hide
Query:  LIEEKNPTIRFSNKITSSPAD---QCAVCLSEFEEGEKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRRKVLPDDI
        LI E  P I+F  ++T+S  D    CAVCL EFE  +++R L+ C H FH+ CLD W+     TCPLCR   +PD++
Subjt:  LIEEKNPTIRFSNKITSSPAD---QCAVCLSEFEEGEKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRRKVLPDDI

Q9ZT50 E3 ubiquitin-protein ligase RHA2A1.1e-1254.39Show/hide
Query:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDDIVAGYHR
        C VCLS+ +EGE+VRKL+C H FHK CL+ WL     TCPLCR  ++ DD V+   R
Subjt:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDDIVAGYHR

Q9ZU51 E3 ubiquitin-protein ligase RHA2B5.7e-1439.05Show/hide
Query:  LELVILVRTIFG------LRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCR
        L L+ L+ T F       L P+    V+ T+    L ++ N    FS + + + A  C VCLS+ + GE+VRKL C H FHK CL+ WL+     CPLCR
Subjt:  LELVILVRTIFG------LRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCR

Query:  RKVLP
          +LP
Subjt:  RKVLP

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A7.7e-1454.39Show/hide
Query:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDDIVAGYHR
        C VCLS+ +EGE+VRKL+C H FHK CL+ WL     TCPLCR  ++ DD V+   R
Subjt:  CAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDDIVAGYHR

AT2G01150.1 RING-H2 finger protein 2B4.1e-1539.05Show/hide
Query:  LELVILVRTIFG------LRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCR
        L L+ L+ T F       L P+    V+ T+    L ++ N    FS + + + A  C VCLS+ + GE+VRKL C H FHK CL+ WL+     CPLCR
Subjt:  LELVILVRTIFG------LRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCR

Query:  RKVLP
          +LP
Subjt:  RKVLP

AT3G19950.1 RING/U-box superfamily protein5.0e-1343.94Show/hide
Query:  PTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDD
        PT++ +  +  S  +QCAVC+ EFE+G  V+++ C H FH+DCL  WL+L   +CP+CR ++  DD
Subjt:  PTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDD

AT3G62690.1 AtL51.4e-1248.53Show/hide
Query:  EKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKL-QCNHTFHKDCLDNWLKLCFATCPLCRRKVLP
        EK P   +S K   SP ++C+VCLSEFEE ++ R L +C H FH DC+D W +   ++CPLCR  V P
Subjt:  EKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKL-QCNHTFHKDCLDNWLKLCFATCPLCRRKVLP

AT5G45290.1 RING/U-box superfamily protein1.9e-1241.43Show/hide
Query:  IRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDDIVAGYH
        I+   K  S    QC +CL E+EE + +R L C+H FHK C+D WLK     CPLCR  +   D  +  H
Subjt:  IRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRRKVLPDDIVAGYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTCTCTCCGAGTTTTTCTCCCACCTCCACACAATGACCGCCTTCTTCACCACCCTGTTAATTCTCGAACTAGTTATTCTCGTTCGCACGATCTTCGGCTTGAG
GCCTAACGGTGACAAGCGCGTGATTCCGACGGCGCAGTTTTTGAAACTGATCGAGGAGAAGAATCCGACGATTCGCTTCTCCAATAAGATTACCTCTAGTCCCGCCGATC
AGTGTGCCGTTTGCCTCTCTGAATTCGAGGAAGGGGAGAAGGTACGGAAATTGCAGTGTAACCACACTTTTCACAAGGATTGCCTTGATAATTGGCTGAAACTCTGTTTC
GCTACGTGTCCGCTTTGCCGGAGGAAGGTTTTGCCGGACGATATTGTCGCCGGCTATCACAGGCTGCGGGACCGTGTAGAGTACGACGGGAGCGACGAGGAGCTCATCTT
TTTGTTATCAGCATTACATGGAGGACTAAATGCACTGTTGGTGGGCAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
GAGTAAAAAATTGGAAGAATTGGAATCTATCTGTCAATCTCTATCTGGGCAGCCATGGGAGCTCTCTCCGAGTTTTTCTCCCACCTCCACACAATGACCGCCTTCTTCAC
CACCCTGTTAATTCTCGAACTAGTTATTCTCGTTCGCACGATCTTCGGCTTGAGGCCTAACGGTGACAAGCGCGTGATTCCGACGGCGCAGTTTTTGAAACTGATCGAGG
AGAAGAATCCGACGATTCGCTTCTCCAATAAGATTACCTCTAGTCCCGCCGATCAGTGTGCCGTTTGCCTCTCTGAATTCGAGGAAGGGGAGAAGGTACGGAAATTGCAG
TGTAACCACACTTTTCACAAGGATTGCCTTGATAATTGGCTGAAACTCTGTTTCGCTACGTGTCCGCTTTGCCGGAGGAAGGTTTTGCCGGACGATATTGTCGCCGGCTA
TCACAGGCTGCGGGACCGTGTAGAGTACGACGGGAGCGACGAGGAGCTCATCTTTTTGTTATCAGCATTACATGGAGGACTAAATGCACTGTTGGTGGGCAGCAATTAA
Protein sequenceShow/hide protein sequence
MGALSEFFSHLHTMTAFFTTLLILELVILVRTIFGLRPNGDKRVIPTAQFLKLIEEKNPTIRFSNKITSSPADQCAVCLSEFEEGEKVRKLQCNHTFHKDCLDNWLKLCF
ATCPLCRRKVLPDDIVAGYHRLRDRVEYDGSDEELIFLLSALHGGLNALLVGSN