; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh07G008080 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh07G008080
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCma_Chr07:3717610..3719719
RNA-Seq ExpressionCmaCh07G008080
SyntenyCmaCh07G008080
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025198.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.0e-8866.06Show/hide
Query:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN
        +FN+IV NA++DAY KCG+ D SYSIFS+M+ER+VVTWTSMVVAY+QTS LDD FRV SCMP K+VHTWTALIN+ V NKY NEALDLF+QMLEEK SPN
Subjt:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN

Query:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          TFVG   AC DL LIAKGK IHGLIIRR+S LNF             SKSGDMKSAR LFNLILEKD +SWNSLITG                     
Subjt:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV
            +  FL VLSACSHTGLSS+GLYI ELMEK   IK SL+HYAV+IDMFGR+N+L+E LDL+SRA NGSKHV
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV

XP_022132706.1 pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia]4.6e-8967.52Show/hide
Query:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN
        +FN+IV NA+IDAY KCGE DTSYSIFSQMQER+VVTWTSMVVAY+QTS LDD FRV SCMP K+VHTWTALIN+F  NKY NEALDLFEQMLEEKIS N
Subjt:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN

Query:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          TFVG   AC DL LIAKGK IHGLIIR +  LNF             SKSGDMKSARTLFNL+ EKD +SWNSLITG                     
Subjt:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV
            +  FL VLSACSHTGL S+GLY+ ELMEK  GIK SLDHYAVLIDMFGRKNRLAE LDL++RA N S HV
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV

XP_023543897.1 pentatricopeptide repeat-containing protein At2g21090-like isoform X1 [Cucurbita pepo subsp. pepo]5.1e-8866.79Show/hide
Query:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN
        +FNMIV NAVI+AY KCGE  TSYS+FS+MQ+R+VVTWTSMVVAY+QTS LDD FRV   MP K+VHTWTALIN+FV NKY NEALDLF+QMLEEK SPN
Subjt:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN

Query:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          TFVG   AC DL LIAKGK IHG+I RR+S LNF             SKSGDMKSARTLFNL+ +KD +SWNSLITG                     
Subjt:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV
            E  FL VLSACSHTGLSS+GLYI ELMEK   IK SLDHYAVLIDMFGRKNRLAE LDL+SRA N SKHV
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV

XP_023543899.1 pentatricopeptide repeat-containing protein At2g21090-like isoform X2 [Cucurbita pepo subsp. pepo]5.1e-8866.79Show/hide
Query:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN
        +FNMIV NAVI+AY KCGE  TSYS+FS+MQ+R+VVTWTSMVVAY+QTS LDD FRV   MP K+VHTWTALIN+FV NKY NEALDLF+QMLEEK SPN
Subjt:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN

Query:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          TFVG   AC DL LIAKGK IHG+I RR+S LNF             SKSGDMKSARTLFNL+ +KD +SWNSLITG                     
Subjt:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV
            E  FL VLSACSHTGLSS+GLYI ELMEK   IK SLDHYAVLIDMFGRKNRLAE LDL+SRA N SKHV
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV

XP_038882958.1 pentatricopeptide repeat-containing protein At2g21090 isoform X1 [Benincasa hispida]6.0e-8966.42Show/hide
Query:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN
        +FNMIV NA++DAY KCG+ D SYSIFS+M+ER+VVTWTSMVVAY+QTS LDD FRV SCMP K+VHTWTALIN    NKY NEALDLF+QMLEEKISPN
Subjt:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN

Query:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          TFVG   AC DL LIAKGK IHG IIRR++ LNF             SKSGDMKSARTLF+LILEKD +SWNSLITG                     
Subjt:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV
            +  FL +LSACSHTGLSS+GL+I ELME    IK SLDHYAVLIDMFGRKNRLAE LDL+SRA NGSKHV
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV

TrEMBL top hitse value%identityAlignment
A0A5D3C8H5 Pentatricopeptide repeat-containing protein5.0e-8966.06Show/hide
Query:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN
        +FN+IV NA++DAY KCG+ D SYSIFS+M+ER+VVTWTSMVVAY+QTS LDD FRV SCMP K+VHTWTALIN+ V NKY NEALDLF+QMLEEK SPN
Subjt:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN

Query:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          TFVG   AC DL LIAKGK IHGLIIRR+S LNF             SKSGDMKSAR LFNLILEKD +SWNSLITG                     
Subjt:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV
            +  FL VLSACSHTGLSS+GLYI ELMEK   IK SL+HYAV+IDMFGR+N+L+E LDL+SRA NGSKHV
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV

A0A6J1BT15 pentatricopeptide repeat-containing protein At2g13600-like2.2e-8967.52Show/hide
Query:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN
        +FN+IV NA+IDAY KCGE DTSYSIFSQMQER+VVTWTSMVVAY+QTS LDD FRV SCMP K+VHTWTALIN+F  NKY NEALDLFEQMLEEKIS N
Subjt:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN

Query:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          TFVG   AC DL LIAKGK IHGLIIR +  LNF             SKSGDMKSARTLFNL+ EKD +SWNSLITG                     
Subjt:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV
            +  FL VLSACSHTGL S+GLY+ ELMEK  GIK SLDHYAVLIDMFGRKNRLAE LDL++RA N S HV
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV

A0A6J1ECZ4 pentatricopeptide repeat-containing protein At2g21090-like isoform X33.2e-8866.42Show/hide
Query:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN
        +FNMIV NAVI+AY KCGE  TSYS+FS+MQ+R+VVTWTSMVVAY+QTS LDD FRV   MP K+VHTWTALIN+FV NKY NEALDLF+QMLEEK SPN
Subjt:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN

Query:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          TFVG   AC DL LIAKGK IH +IIRR+S LNF             SKSGDMKSARTLFNL+ +KD +SWNSLITG                     
Subjt:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV
            E  FL VLSACSHTGLSS+GLYI ELMEK   IK SLDHYAVLIDMFGRKNRLAE LDL+SRA N SKH+
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV

A0A6J1EJM2 pentatricopeptide repeat-containing protein At2g21090-like isoform X13.2e-8866.42Show/hide
Query:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN
        +FNMIV NAVI+AY KCGE  TSYS+FS+MQ+R+VVTWTSMVVAY+QTS LDD FRV   MP K+VHTWTALIN+FV NKY NEALDLF+QMLEEK SPN
Subjt:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN

Query:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          TFVG   AC DL LIAKGK IH +IIRR+S LNF             SKSGDMKSARTLFNL+ +KD +SWNSLITG                     
Subjt:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV
            E  FL VLSACSHTGLSS+GLYI ELMEK   IK SLDHYAVLIDMFGRKNRLAE LDL+SRA N SKH+
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV

A0A6J1IJL9 pentatricopeptide repeat-containing protein At2g21090-like isoform X13.2e-8866.42Show/hide
Query:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN
        +FNMIV NAVI+AY KCGE  TSYS+FS+MQ+R+VVTWTSMVVAY+QTS LDD FRV   MP K+VHTWTALIN+FV NKY NEALDLF+QMLEEK SPN
Subjt:  KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPN

Query:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          TFVG   AC DL LIAKGK IHG+IIRR+S LNF             SKSGDMKSARTLFNL+ +KD +SWNSLITG                     
Subjt:  DLTFVG---ACVDLGLIAKGKTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV
            E  FL VLSACSHTGLSS+GLYI E MEK   IK SLDHYAVLIDMFGRKNRLAE LDL+SRA N SKH+
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHV

SwissProt top hitse value%identityAlignment
O23266 Pentatricopeptide repeat-containing protein At4g14050, mitochondrial2.7e-3128.79Show/hide
Query:  EFKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKIS
        E+  + +V ++++D Y+KCG L+++ ++F  ++ +N ++WT+MV  Y+++   ++   +   +P K++++WTALI+ FV +    EA  +F +M  E++ 
Subjt:  EFKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKIS

Query:  PND----LTFVGACVDLGLIAKGKTIHGLIIR---------RNSGLN-FSKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          D     + VGAC +L     G+ +HGL+I           N+ ++ ++K  D+ +A+ +F+ +  +D +SW SLI G                     
Subjt:  PND----LTFVGACVDLGLIAKGKTIHGLIIR---------RNSGLN-FSKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLM
            E  F+ ++ ACSH G   KG  + + M K  GI+ SL HY  L+D+ GR   L E  +L+
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLM

O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic3.9e-3030.74Show/hide
Query:  NMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQM-LEEKISPND
        N+ + NA++D Y+KCG ++ +  +F  M+E++ VTWT+M+  Y+ +   +    VL+ MP+KD+  W ALI+++  N   NEAL +F ++ L++ +  N 
Subjt:  NMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQM-LEEKISPND

Query:  LTFV---GACVDLGLIAKGKTIHGLIIRRNSGLNF----------SKSGDMKSARTLFNLILEKDELSWNSLITG--------------DKTESA-----
        +T V    AC  +G +  G+ IH  I +    +NF          SK GD++ +R +FN + ++D   W+++I G               K + A     
Subjt:  LTFV---GACVDLGLIAKGKTIHGLIIRRNSGLNF----------SKSGDMKSARTLFNLILEKDELSWNSLITG--------------DKTESA-----

Query:  ---FLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVL
           F +V  ACSHTGL  +   +   ME   GI     HYA ++D+ GR   L + +
Subjt:  ---FLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVL

Q9C501 Pentatricopeptide repeat-containing protein At1g333501.2e-2829.85Show/hide
Query:  FKFNMIVLNAVIDAY-SKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEE-KI
        F   ++V  A++ +Y S    +  +  +F +M ERNVV+WT+M+  Y+++  + +   +   MPE+DV +W A++ +   N    EA+ LF +M+ E  I
Subjt:  FKFNMIVLNAVIDAY-SKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEE-KI

Query:  SPNDLTFV---GACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLIT-----GDKTES-----------
         PN++T V    AC   G +   K IH    RR+   +          + K G+++ A ++F +  +K   +WNS+I      G   E+           
Subjt:  SPNDLTFV---GACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLIT-----GDKTES-----------

Query:  ---------AFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMS
                  F+ +L+AC+H GL SKG    +LM    GI+  ++HY  LID+ GR  R  E L++MS
Subjt:  ---------AFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMS

Q9FG16 Pentatricopeptide repeat-containing protein At5g065403.7e-3331.2Show/hide
Query:  FKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISP
        F+ ++ V N+++  Y+ CG +  +  IF QM  R+VV+WTSMV  Y +  M+++   +   MP +++ TW+ +IN +  N    +A+DLFE M  E +  
Subjt:  FKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISP

Query:  ND---LTFVGACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITG----------------------D
        N+   ++ + +C  LG +  G+  +  +++ +  +N          F + GD++ A  +F  + E D LSW+S+I G                       
Subjt:  ND---LTFVGACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITG----------------------D

Query:  KTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAH
          +  F  VLSACSH GL  KGL I E M+K  GI+  L+HY  ++DM GR  +LAE  + + + H
Subjt:  KTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAH

Q9FIF7 Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic9.5e-2928.14Show/hide
Query:  VIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---G
        +++ Y K GEL  +  +F +M +R+ V  T M+  YS+   + +   +   +  KD   WTA+I+  V NK  N+AL+LF +M  E +S N+ T V    
Subjt:  VIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---G

Query:  ACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITGDKTESAFLD----------------------VL
        AC DLG +  G+ +H  +  +   L+          +S+ GD+  AR +F ++ +KD +S+N++I+G     A ++                      +L
Subjt:  ACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITGDKTESAFLD----------------------VL

Query:  SACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHVM
        +ACSH GL   GL +   M++   ++  ++HY  ++D+ GR  RL E    +        H+M
Subjt:  SACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHVM

Arabidopsis top hitse value%identityAlignment
AT1G33350.1 Pentatricopeptide repeat (PPR) superfamily protein8.8e-3029.85Show/hide
Query:  FKFNMIVLNAVIDAY-SKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEE-KI
        F   ++V  A++ +Y S    +  +  +F +M ERNVV+WT+M+  Y+++  + +   +   MPE+DV +W A++ +   N    EA+ LF +M+ E  I
Subjt:  FKFNMIVLNAVIDAY-SKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEE-KI

Query:  SPNDLTFV---GACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLIT-----GDKTES-----------
         PN++T V    AC   G +   K IH    RR+   +          + K G+++ A ++F +  +K   +WNS+I      G   E+           
Subjt:  SPNDLTFV---GACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLIT-----GDKTES-----------

Query:  ---------AFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMS
                  F+ +L+AC+H GL SKG    +LM    GI+  ++HY  LID+ GR  R  E L++MS
Subjt:  ---------AFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMS

AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.7e-3130.74Show/hide
Query:  NMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQM-LEEKISPND
        N+ + NA++D Y+KCG ++ +  +F  M+E++ VTWT+M+  Y+ +   +    VL+ MP+KD+  W ALI+++  N   NEAL +F ++ L++ +  N 
Subjt:  NMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQM-LEEKISPND

Query:  LTFV---GACVDLGLIAKGKTIHGLIIRRNSGLNF----------SKSGDMKSARTLFNLILEKDELSWNSLITG--------------DKTESA-----
        +T V    AC  +G +  G+ IH  I +    +NF          SK GD++ +R +FN + ++D   W+++I G               K + A     
Subjt:  LTFV---GACVDLGLIAKGKTIHGLIIRRNSGLNF----------SKSGDMKSARTLFNLILEKDELSWNSLITG--------------DKTESA-----

Query:  ---FLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVL
           F +V  ACSHTGL  +   +   ME   GI     HYA ++D+ GR   L + +
Subjt:  ---FLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVL

AT4G14050.1 Pentatricopeptide repeat (PPR) superfamily protein1.9e-3228.79Show/hide
Query:  EFKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKIS
        E+  + +V ++++D Y+KCG L+++ ++F  ++ +N ++WT+MV  Y+++   ++   +   +P K++++WTALI+ FV +    EA  +F +M  E++ 
Subjt:  EFKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKIS

Query:  PND----LTFVGACVDLGLIAKGKTIHGLIIR---------RNSGLN-FSKSGDMKSARTLFNLILEKDELSWNSLITG---------------------
          D     + VGAC +L     G+ +HGL+I           N+ ++ ++K  D+ +A+ +F+ +  +D +SW SLI G                     
Subjt:  PND----LTFVGACVDLGLIAKGKTIHGLIIR---------RNSGLN-FSKSGDMKSARTLFNLILEKDELSWNSLITG---------------------

Query:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLM
            E  F+ ++ ACSH G   KG  + + M K  GI+ SL HY  L+D+ GR   L E  +L+
Subjt:  -DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLM

AT5G06540.1 Pentatricopeptide repeat (PPR) superfamily protein2.7e-3431.2Show/hide
Query:  FKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISP
        F+ ++ V N+++  Y+ CG +  +  IF QM  R+VV+WTSMV  Y +  M+++   +   MP +++ TW+ +IN +  N    +A+DLFE M  E +  
Subjt:  FKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISP

Query:  ND---LTFVGACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITG----------------------D
        N+   ++ + +C  LG +  G+  +  +++ +  +N          F + GD++ A  +F  + E D LSW+S+I G                       
Subjt:  ND---LTFVGACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITG----------------------D

Query:  KTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAH
          +  F  VLSACSH GL  KGL I E M+K  GI+  L+HY  ++DM GR  +LAE  + + + H
Subjt:  KTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAH

AT5G59200.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.8e-3028.14Show/hide
Query:  VIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---G
        +++ Y K GEL  +  +F +M +R+ V  T M+  YS+   + +   +   +  KD   WTA+I+  V NK  N+AL+LF +M  E +S N+ T V    
Subjt:  VIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---G

Query:  ACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITGDKTESAFLD----------------------VL
        AC DLG +  G+ +H  +  +   L+          +S+ GD+  AR +F ++ +KD +S+N++I+G     A ++                      +L
Subjt:  ACVDLGLIAKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITGDKTESAFLD----------------------VL

Query:  SACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHVM
        +ACSH GL   GL +   M++   ++  ++HY  ++D+ GR  RL E    +        H+M
Subjt:  SACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHVM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCACGAGTTCAAGTTTAATATGATTGTTCTCAATGCTGTAATTGATGCATACAGTAAATGTGGCGAACTGGATACGTCATATTCTATTTTCAGTCAAATGCAGGA
GAGAAATGTTGTTACCTGGACCTCAATGGTTGTAGCCTATTCTCAGACATCGATGTTAGATGATGTTTTTCGAGTGTTAAGTTGTATGCCGGAAAAAGATGTCCATACTT
GGACTGCTTTGATTAATTCTTTTGTAAGCAACAAGTATAGAAATGAGGCCCTGGATTTATTTGAACAAATGCTGGAGGAAAAGATTTCTCCTAATGATTTGACATTTGTA
GGTGCTTGTGTAGATCTTGGTTTGATAGCAAAAGGAAAAACGATTCATGGACTCATAATCAGAAGGAACAGTGGCCTTAATTTTTCAAAGAGTGGGGACATGAAATCAGC
TAGGACGTTGTTTAACTTGATTCTTGAAAAAGATGAATTGTCGTGGAATTCATTAATAACTGGGGATAAGACCGAAAGTGCGTTTCTAGATGTGCTGTCTGCCTGTTCCC
ATACTGGTTTGTCATCTAAAGGATTATATATTCCGGAGTTAATGGAGAAGTGTTGTGGTATTAAGCATAGTTTAGATCATTATGCGGTCTTGATTGATATGTTTGGAAGA
AAAAATAGACTTGCCGAAGTATTGGATTTAATGTCCAGGGCACATAATGGATCAAAACATGTCATGGGGTGCAGTTTTGGGGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCACGAGTTCAAGTTTAATATGATTGTTCTCAATGCTGTAATTGATGCATACAGTAAATGTGGCGAACTGGATACGTCATATTCTATTTTCAGTCAAATGCAGGA
GAGAAATGTTGTTACCTGGACCTCAATGGTTGTAGCCTATTCTCAGACATCGATGTTAGATGATGTTTTTCGAGTGTTAAGTTGTATGCCGGAAAAAGATGTCCATACTT
GGACTGCTTTGATTAATTCTTTTGTAAGCAACAAGTATAGAAATGAGGCCCTGGATTTATTTGAACAAATGCTGGAGGAAAAGATTTCTCCTAATGATTTGACATTTGTA
GGTGCTTGTGTAGATCTTGGTTTGATAGCAAAAGGAAAAACGATTCATGGACTCATAATCAGAAGGAACAGTGGCCTTAATTTTTCAAAGAGTGGGGACATGAAATCAGC
TAGGACGTTGTTTAACTTGATTCTTGAAAAAGATGAATTGTCGTGGAATTCATTAATAACTGGGGATAAGACCGAAAGTGCGTTTCTAGATGTGCTGTCTGCCTGTTCCC
ATACTGGTTTGTCATCTAAAGGATTATATATTCCGGAGTTAATGGAGAAGTGTTGTGGTATTAAGCATAGTTTAGATCATTATGCGGTCTTGATTGATATGTTTGGAAGA
AAAAATAGACTTGCCGAAGTATTGGATTTAATGTCCAGGGCACATAATGGATCAAAACATGTCATGGGGTGCAGTTTTGGGGTCTAG
Protein sequenceShow/hide protein sequence
MGHEFKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV
GACVDLGLIAKGKTIHGLIIRRNSGLNFSKSGDMKSARTLFNLILEKDELSWNSLITGDKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGR
KNRLAEVLDLMSRAHNGSKHVMGCSFGV