CuGenDBv2

Gene ID	CmaCh07G008430
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Vacuolar protein sorting 55 family protein
Genome location	Cma_Chr07:3914975..3919747
RNA-Seq Expression	CmaCh07G008430
Synteny	CmaCh07G008430
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR007262 - Vps55/LEPROT

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6595172.1 Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia]

3.6e-52

100

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Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

XP_022963366.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita moschata]

3.6e-52

100

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Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

XP_022963368.1 vacuolar protein sorting-associated protein 55 homolog isoform X2 [Cucurbita moschata]

3.6e-52

100

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Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

XP_022972744.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita maxima]

3.6e-52

100

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Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

XP_023518928.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita pepo subsp. pepo]

3.6e-52

100

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Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHI6 Uncharacterized protein

8.6e-52

99.02

Show/hide

Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

A0A6J1HFY6 vacuolar protein sorting-associated protein 55 homolog isoform X1

1.7e-52

100

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Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

A0A6J1HHK6 vacuolar protein sorting-associated protein 55 homolog isoform X2

1.7e-52

100

Show/hide

Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

A0A6J1I9J0 vacuolar protein sorting-associated protein 55 homolog isoform X2

1.7e-52

100

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Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

A0A6J1ICF8 vacuolar protein sorting-associated protein 55 homolog isoform X1

1.7e-52

100

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Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

SwissProt top hits

e value

%identity

Alignment

P47111 Vacuolar protein sorting-associated protein 55

8.4e-04

25.77

Show/hide

Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGG----STQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCF
        +CAL++N++PL   L+++L P+P   F  G    ++ F++     G    A FLTG      +A+P++  H  +I   +  +  +   I   +++ F
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGG----STQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCF

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog

1.2e-23

56.04

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Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL
        ACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL

Arabidopsis top hits

e value

%identity

Alignment

AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein

8.8e-25

56.04

Show/hide

Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL
        ACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein

8.8e-25

56.04

Show/hide

Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL
        ACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein

8.8e-25

56.04

Show/hide

Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL
        ACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL

AT3G11530.1 Vacuolar protein sorting 55 (VPS55) family protein

3.0e-49

85.29

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Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFL SRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CTV+CFHR SL+D
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

AT3G11530.2 Vacuolar protein sorting 55 (VPS55) family protein

3.0e-49

85.29

Show/hide

Query:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED
        ACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFL SRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CTV+CFHR SL+D
Subjt:  ACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLED

Query:  DW
        DW
Subjt:  DW

Sequences

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CDS sequence

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ATGTGTTTCTGCGATAATAAGCATGCTTGTGCCCTATATAACAATTGGTGGCCTCTGTTATCAGCTTTGATGTATGTGCTTGTTCCAATGCCTTGTTTATTTTTC
GGAGGTGGGTCGACGCAGTTTTTGACTAGTCGAGATGGCGGAGGATGGATCGGTGCTGCTAAATTCTTGACGGGAGCATCAACCGTGGGGAGTTTGGCAATTCCT
ATTATCCTCAGGCATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCGTTCTTCATTTTCGTTTGCACCGTGTTGTGCTTCCACCGTGTTAGC
CTTGAAGATGATTGGTGCGTGGTTTTCGGTTAA

mRNA sequence

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Protein sequence

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MCFCDNKHACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVS
LEDDWCVVFG

CmaCh07G008430 (gene) of Cucurbita maxima (Rimu) v1.1 genome