CuGenDBv2

Gene ID	CmaCh07G010640
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Protein TIC 214
Genome location	Cma_Chr07:5696652..5696899
RNA-Seq Expression	CmaCh07G010640
Synteny	CmaCh07G010640
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0009706 - chloroplast inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008896 - Protein TIC214

Homology

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GenBank top hits

e value

%identity

Alignment

ALO22556.1 Ycf1 [Cucurbita pepo subsp. fraterna]

9.3e-27

86.76

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

ALO22637.1 Ycf1 [Cucurbita pepo subsp. ovifera]

9.3e-27

86.76

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

ALO22749.1 Ycf1 [Cucurbita pepo subsp. pepo]

9.3e-27

86.76

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

ALO22868.1 Ycf1 [Cucurbita pedatifolia]

9.3e-27

86.76

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

YP_009447594.1 Ycf1 [Cucurbita moschata]

9.3e-27

86.76

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

TrEMBL top hits

e value

%identity

Alignment

A0A0S2IDU4 Ycf1

4.5e-27

86.76

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

A0A0S2IFQ3 Ycf1

4.5e-27

86.76

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

A0A0S2IGK3 Ycf1

4.5e-27

86.76

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

A0A0S2IGY8 Ycf1

4.5e-27

86.76

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

A0A2H4T231 Protein TIC 214

4.5e-27

86.76

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

SwissProt top hits

e value

%identity

Alignment

A0ZZ93 Protein TIC 214

2.1e-21

79.31

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Query:  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++KHLD  K KL K KFFLWPNYRLEDLACMNRYWF+TNN SRFSM+RI MYP+LKIR
Subjt:  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

Q06R72 Protein TIC 214

2.1e-21

82.46

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Query:  SKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        S+ LDR KN L K KFFLWPNYRLEDLACMNRYWFDTNN SRFSMLRI +YP+LKIR
Subjt:  SKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

Q0ZIW0 Protein TIC 214

2.7e-21

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Query:  SKHLDRYKN---KLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        +KHLDR KN   KL K K FLWPNYRLEDLACMNRYWFDTNN S FSM+RIHMYP+LKIR
Subjt:  SKHLDRYKN---KLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

Q2L951 Protein TIC 214

2.1e-21

79.31

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Query:  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++KHLD  K KL K KFFLWPNYRLEDLACMNRYWF+TNN SRFSM+RI MYP+LKIR
Subjt:  RSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

Q4VZL0 Protein TIC 214

4.8e-26

77.94

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Query:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        ++  D  +  RSKHLDRY+N+L   K FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  IEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

Arabidopsis top hits

e value

%identity

Alignment

ATCG01130.1 Ycf1 protein

3.9e-15

54.41

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Query:  IQDFTMQIRSK---HLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKI
        IQ+ T  +  K    LD+ KN L   K FLWPN++LEDLACMNRYWF+T N + FSM+RI MY +  I
Subjt:  IQDFTMQIRSK---HLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKI

Sequences

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CDS sequence

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ATGATATCCATAGAAATACAGGATTTTACAATGCAAATAAGAAGCAAACATCTTGATAGATATAAAAATAAACTAAATAAATTCAAGTTCTTTTTGTGGCCCAAT
TATCGATTAGAAGATTTAGCTTGTATGAATCGTTATTGGTTTGATACCAATAATAGCAGTCGTTTTAGTATGCTAAGGATCCATATGTATCCACAATTGAAAATT
CGTTAA

mRNA sequence

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Protein sequence

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MISIEIQDFTMQIRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

CmaCh07G010640 (gene) of Cucurbita maxima (Rimu) v1.1 genome