CuGenDBv2

Gene ID	CmaCh07G010790
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	kinetochore protein SPC24 homolog
Genome location	Cma_Chr07:5751283..5753294
RNA-Seq Expression	CmaCh07G010790
Synteny	CmaCh07G010790
Gene Ontology terms	GO:0051983 - regulation of chromosome segregation (biological process)
InterPro domains	IPR044951 - Kinetochore protein SPC24-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022144074.1 uncharacterized protein LOC111013852 isoform X1 [Momordica charantia]

4.6e-87

87.56

Show/hide

Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH
        MGDFSGK+NIEELLSYGNDLV LLKDQ DVQTLNQCL+H  ALQS C DDFSNVH  VQDYEKKIE CR KTEEAKARTVAD EMD+LE+E+EEELR+EH
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH

Query:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS
        LLMEEIRLVT++INELD QRISVQERKQA KKLEQQELRAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFELDPTKTS+FDICN IW+MINS
Subjt:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P

XP_022144075.1 uncharacterized protein LOC111013852 isoform X2 [Momordica charantia]

1.9e-85

86.5

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Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHL
        MGDFSGK+NIEELLSYGNDLV LLKDQ DVQTLNQCL+H  ALQS C DDFSNVH   +YEKKIE CR KTEEAKARTVAD EMD+LE+E+EEELR+EHL
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHL

Query:  LMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP
        LMEEIRLVT++INELD QRISVQERKQA KKLEQQELRAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFELDPTKTS+FDICN IW+MINSP
Subjt:  LMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP

XP_022931907.1 uncharacterized protein LOC111438184 [Cucurbita moschata]

4.5e-95

93.53

Show/hide

Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH
        MGDFSGKMNIE+LLSYG+DLV LLKDQNDVQTLNQCLQHFNALQSS HDD  NVH  VQDYEKKIEECRVKTEEAKARTVADDEMDILEKE+EEE+REEH
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH

Query:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS
        LLMEEIRLV+NQINELDRQRISVQE+KQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTK SSFDICNDIWNMINS
Subjt:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P

XP_022966574.1 uncharacterized protein LOC111466216 [Cucurbita maxima]

3.5e-103

100

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Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHL
        MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHL
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHL

Query:  LMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP
        LMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP
Subjt:  LMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP

XP_023518318.1 uncharacterized protein LOC111781837 [Cucurbita pepo subsp. pepo]

4.1e-96

94.53

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Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH
        MGDFSGKMNIE+LLSYG+DLV LLKDQNDVQTLNQCLQ FNALQSSCHDD  NVH  VQDYEKKIEECRVKTEEAKARTVADDEMDILEKE+EEE+REEH
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH

Query:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS
        LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTK SSFDICNDIWNMINS
Subjt:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CQL9 uncharacterized protein LOC111013852 isoform X2

9.3e-86

86.5

Show/hide

Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHL
        MGDFSGK+NIEELLSYGNDLV LLKDQ DVQTLNQCL+H  ALQS C DDFSNVH   +YEKKIE CR KTEEAKARTVAD EMD+LE+E+EEELR+EHL
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHL

Query:  LMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP
        LMEEIRLVT++INELD QRISVQERKQA KKLEQQELRAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFELDPTKTS+FDICN IW+MINSP
Subjt:  LMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP

A0A6J1CR83 uncharacterized protein LOC111013852 isoform X1

2.2e-87

87.56

Show/hide

Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH
        MGDFSGK+NIEELLSYGNDLV LLKDQ DVQTLNQCL+H  ALQS C DDFSNVH  VQDYEKKIE CR KTEEAKARTVAD EMD+LE+E+EEELR+EH
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH

Query:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS
        LLMEEIRLVT++INELD QRISVQERKQA KKLEQQELRAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFELDPTKTS+FDICN IW+MINS
Subjt:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P

A0A6J1F034 uncharacterized protein LOC111438184

2.2e-95

93.53

Show/hide

Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH
        MGDFSGKMNIE+LLSYG+DLV LLKDQNDVQTLNQCLQHFNALQSS HDD  NVH  VQDYEKKIEECRVKTEEAKARTVADDEMDILEKE+EEE+REEH
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH

Query:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS
        LLMEEIRLV+NQINELDRQRISVQE+KQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTK SSFDICNDIWNMINS
Subjt:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P

A0A6J1HU69 uncharacterized protein LOC111466216

1.7e-103

100

Show/hide

Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHL
        MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHL
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHL

Query:  LMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP
        LMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP
Subjt:  LMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP

A0A6J1IPN8 uncharacterized protein LOC111478320

4.0e-81

81.59

Show/hide

Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH
        M DF+GK NIEE+LSYG+DLV LL DQNDVQTLNQCL+HF  LQSSC DDFSNV   VQDYEKKIE CR KTEEAKA TVADDE+DILEKE+ EEL + +
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH

Query:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS
        LLMEEIR++T++IN+LDRQRISVQERKQA KKLEQQELR QRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQ+FE DPT  SSFDICN IWNMINS
Subjt:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINS

Query:  P
        P
Subjt:  P

SwissProt top hits

e value

%identity

Alignment

Q67XT3 Kinetochore protein SPC24 homolog

9.3e-43

43.72

Show/hide

Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH
        MG+ S   +IE+L+SYG+DL+ LL  +N    ++Q  + F AL  +CH+DF+ +   ++D + K+  C+ KTEEA +   A+DE++ L+KE++EE+  E 
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH

Query:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMIN
         L +E+RLV +++ +L+ Q  S+ E KQ+TK+  + +LRA++KLSMYASVT++IP++DD SKISG++VDR KR+++KF+ +  K ++++ CN IW++IN
Subjt:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMIN

Arabidopsis top hits

e value

%identity

Alignment

AT3G08880.1 unknown protein

6.6e-44

43.72

Show/hide

Query:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH
        MG+ S   +IE+L+SYG+DL+ LL  +N    ++Q  + F AL  +CH+DF+ +   ++D + K+  C+ KTEEA +   A+DE++ L+KE++EE+  E 
Subjt:  MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEH

Query:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMIN
         L +E+RLV +++ +L+ Q  S+ E KQ+TK+  + +LRA++KLSMYASVT++IP++DD SKISG++VDR KR+++KF+ +  K ++++ CN IW++IN
Subjt:  LLMEEIRLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMIN

AT5G01570.1 unknown protein

2.5e-27

38.17

Show/hide

Query:  NIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHLLMEEIRL
        N E ++S+G++L+ +L D+     L Q L+   A+  SC +DF  +H  +QD +KK++ C+ KT+EA +    ++E++ L+KE++EEL  E  L EE+  
Subjt:  NIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVH-LVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHLLMEEIRL

Query:  VTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTK-TSSFDICND
                 R     +E + A K+ ++ +LR + KL MYASVT +IPN+DD  K SG++V R+KR++ KFE D  K TS ++ CN+
Subjt:  VTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTK-TSSFDICND

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGGATTTCTCCGGAAAGATGAACATCGAGGAACTCTTATCTTATGGCAACGATCTGGTGGTTTTATTGAAGGACCAAAACGACGTTCAAACCTTGAATCAA
TGTCTCCAACATTTCAACGCCCTTCAATCTTCTTGTCACGATGATTTCAGTAATGTTCACTTAGTTCAAGATTATGAGAAGAAAATCGAGGAATGCCGGGTGAAA
ACAGAGGAGGCGAAAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTTGAAAAGGAGGTCGAAGAGGAACTTAGGGAAGAACATTTGCTCATGGAGGAGATT
AGACTTGTCACCAATCAAATTAATGAGCTAGACCGACAAAGGATTTCGGTTCAAGAAAGGAAGCAGGCAACGAAGAAACTTGAACAACAAGAACTTAGGGCGCAG
AGGAAGCTTTCAATGTATGCATCAGTCACTGACATCATTCCAAACATGGATGATCACTCTAAAATATCTGGCCATATTGTGGATAGAAATAAACGGGTTGTGCAG
AAGTTTGAATTGGATCCGACTAAGACGTCTTCTTTTGATATATGCAATGACATTTGGAATATGATTAATTCCCCATAG

mRNA sequence

Show/hide mRNA sequence

TACTGTGTCTGACGAGTGGCTCCTGAATTCAAAATTTGTATCACCGCATCACTCTTCTCTCCAATCTCGTTGTTGGTTCGTTGTTGATTTAGAGGAATGGGGGAT
TTCTCCGGAAAGATGAACATCGAGGAACTCTTATCTTATGGCAACGATCTGGTGGTTTTATTGAAGGACCAAAACGACGTTCAAACCTTGAATCAATGTCTCCAA
CATTTCAACGCCCTTCAATCTTCTTGTCACGATGATTTCAGTAATGTTCACTTAGTTCAAGATTATGAGAAGAAAATCGAGGAATGCCGGGTGAAAACAGAGGAG
GCGAAAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTTGAAAAGGAGGTCGAAGAGGAACTTAGGGAAGAACATTTGCTCATGGAGGAGATTAGACTTGTC
ACCAATCAAATTAATGAGCTAGACCGACAAAGGATTTCGGTTCAAGAAAGGAAGCAGGCAACGAAGAAACTTGAACAACAAGAACTTAGGGCGCAGAGGAAGCTT
TCAATGTATGCATCAGTCACTGACATCATTCCAAACATGGATGATCACTCTAAAATATCTGGCCATATTGTGGATAGAAATAAACGGGTTGTGCAGAAGTTTGAA
TTGGATCCGACTAAGACGTCTTCTTTTGATATATGCAATGACATTTGGAATATGATTAATTCCCCATAG

Protein sequence

Show/hide protein sequence

MGDFSGKMNIEELLSYGNDLVVLLKDQNDVQTLNQCLQHFNALQSSCHDDFSNVHLVQDYEKKIEECRVKTEEAKARTVADDEMDILEKEVEEELREEHLLMEEI
RLVTNQINELDRQRISVQERKQATKKLEQQELRAQRKLSMYASVTDIIPNMDDHSKISGHIVDRNKRVVQKFELDPTKTSSFDICNDIWNMINSP

CmaCh07G010790 (gene) of Cucurbita maxima (Rimu) v1.1 genome