; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh07G012190 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh07G012190
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionhigh mobility group B protein 6-like
Genome locationCma_Chr07:6696877..6700634
RNA-Seq ExpressionCmaCh07G012190
SyntenyCmaCh07G012190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595551.1 hypothetical protein SDJN03_12104, partial [Cucurbita argyrosperma subsp. sororia]2.5e-12978.81Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQ +NSLSNHVPAVAKIVKSK E+VEIPLSGDANKEN PPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKVAFIDSKLLILN
        RERDMVLEM+RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISP RSLREKEREKIFTDLQFQEFE SDEEESIDENSSSDSSEF             
Subjt:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKVAFIDSKLLILN

Query:  WWFSDSLSLCLSPISSDSVPLSLSNSFPFQCPFFYSYPSSSSSPVLNFSVSFWVFFDPPAPRFISGDSDFRASDLSALLLRFINSETITLLFHRPYWFLA
                                                     L FSVSFWVFFD PA RFISGDSDFRASDLS LLLRFINSETITLLFHR YWFLA
Subjt:  WWFSDSLSLCLSPISSDSVPLSLSNSFPFQCPFFYSYPSSSSSPVLNFSVSFWVFFDPPAPRFISGDSDFRASDLSALLLRFINSETITLLFHRPYWFLA

Query:  FLAWGVVGCLLLFGSTRGSCQYILEKSCLCIIDSC
        FLAWGVVGCLLLFGSTRGSCQYILEKSCLCIIDSC
Subjt:  FLAWGVVGCLLLFGSTRGSCQYILEKSCLCIIDSC

KAG7027530.1 hypothetical protein SDJN02_11544, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-8694.71Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQ +NSLSNHVPAVAKIVKSK E+VEIPLSGDANKEN PPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV
        RERDMVLEM+RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISP RSLREKEREKIFTDLQFQEFE SDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV

XP_022924949.1 high mobility group B protein 6-like [Cucurbita moschata]2.6e-8694.71Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQ +NSLSNHVPAVAKIVKSK E+VEIPLSGDANKEN PPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV
        RERDMVLEM+RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRIS MRSLREKEREKIFTDLQFQEFE SDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV

XP_022966463.1 high mobility group B protein 6-like [Cucurbita maxima]1.6e-9198.94Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV
        RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV

XP_023517579.1 high mobility group B protein 6-like [Cucurbita pepo subsp. pepo]1.8e-8795.77Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQ +NSLSNHVPAVAKIVKSK E+VEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV
        RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFE SDEEESIDE SSSDSSEF +
Subjt:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV

TrEMBL top hitse value%identityAlignment
A0A1S3CJ78 high mobility group B protein 65.2e-6475.65Show/hide
Query:  MQSLLH--PTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK
        MQ+L H  P+  D+ LKSGRRPLQ KNSL N VP+VAKI+KSK E ++I LSGDANKEN PP  AT    ESCDLSLADELNAVK K+ERLRLDGERTEK
Subjt:  MQSLLH--PTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK

Query:  MLRERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKVAF
        MLRERD+VLE++ KE+LQRS+ QRDLEMEVDRLFRLKELRSYCMRISP+RSLREKEREKIFTD QF EFE  D EES+ ENSS DSSEF   F
Subjt:  MLRERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKVAF

A0A5A7SJQ2 High mobility group B protein 63.9e-6475.65Show/hide
Query:  MQSLLH--PTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK
        MQ+L H  P+  D+ LKSGRRPLQ KNSL N VP+VAKI+KSK E ++I LSGDANKEN PP  AT    ESCDLSLADELNAVK K+ERLRLDGERTEK
Subjt:  MQSLLH--PTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK

Query:  MLRERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKVAF
        MLRERD+VLE++ KE+LQRS+ QRDLEMEVDRLFRLKELRSYCMRISP+RSLREKEREKIFTD QF EFE  D EES+ ENSS DSSEF   F
Subjt:  MLRERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKVAF

A0A5D3CEI7 High mobility group B protein 65.2e-6475.65Show/hide
Query:  MQSLLH--PTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK
        MQ+L H  P+  D+ LKSGRRPLQ KNSL N VP+VAKI+KSK E ++I LSGDANKEN PP  AT    ESCDLSLADELNAVK K+ERLRLDGERTEK
Subjt:  MQSLLH--PTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK

Query:  MLRERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKVAF
        MLRERD+VLE++ KE+LQRS+ QRDLEMEVDRLFRLKELRSYCMRISP+RSLREKEREKIFTD QF EFE  D EES+ ENSS DSSEF   F
Subjt:  MLRERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKVAF

A0A6J1EAP1 high mobility group B protein 6-like1.3e-8694.71Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQ +NSLSNHVPAVAKIVKSK E+VEIPLSGDANKEN PPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV
        RERDMVLEM+RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRIS MRSLREKEREKIFTDLQFQEFE SDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV

A0A6J1HS84 high mobility group B protein 6-like7.6e-9298.94Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV
        RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01910.1 unknown protein5.9e-2045.86Show/hide
Query:  SCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFET
        S D SLA+EL+A K KLERLR D E TEK+L+ERD  +++    +LQR E Q+ LE++VDRLFRLKEL +Y  +ISP+RSLR KE+++      F   E 
Subjt:  SCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFET

Query:  SDEEESID--ENSSSDSSEFKVAFIDSKLLILN
         DEE S++       + S  K   ++  ++I N
Subjt:  SDEEESID--ENSSSDSSEFKVAFIDSKLLILN

AT5G01910.2 unknown protein6.5e-1957.95Show/hide
Query:  SCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREK
        S D SLA+EL+A K KLERLR D E TEK+L+ERD  +++    +LQR E Q+ LE++VDRLFRLKEL +Y  +ISP+RSLR KE+++
Subjt:  SCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMQRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCCCTTCTCCATCCCACGCATCTAGATCTTCATCTCAAGTCCGGCCGCCGCCCACTCCAACGGAAGAATTCACTCTCAAATCATGTTCCTGCAGTCGCCAAAAT
CGTCAAATCCAAGGGGGAACAGGTAGAGATCCCGCTATCCGGAGATGCCAATAAGGAGAACGAACCGCCGATTCACGCGACGGCGACGAGGACAGAGTCATGTGATTTGT
CTCTGGCTGATGAACTCAATGCGGTTAAGATGAAGCTTGAGAGATTGAGATTAGACGGTGAACGGACGGAGAAAATGTTGAGAGAGAGGGATATGGTGTTGGAGATGCAG
AGGAAGGAGATTTTGCAGAGAAGTGAGGTGCAGAGGGATCTGGAGATGGAGGTCGACAGGTTATTCAGATTGAAGGAACTCAGATCGTACTGTATGAGGATTTCTCCGAT
GCGAAGTCTCAGAGAGAAGGAGCGAGAGAAGATATTCACCGACTTACAATTTCAGGAATTTGAAACCAGCGACGAAGAAGAATCGATTGACGAGAATTCATCGTCGGATT
CCTCAGAATTCAAAGTGGCATTCATTGATTCAAAGCTTTTGATTTTGAATTGGTGGTTTTCCGATTCTCTCTCTCTCTGTCTCTCTCCGATTTCCTCGGACTCAGTACCT
CTCTCTCTCTCCAATTCATTCCCATTTCAATGTCCTTTTTTCTATTCTTATCCCTCTTCCTCTTCTTCCCCAGTTCTTAATTTTTCCGTTTCCTTTTGGGTGTTTTTCGA
TCCTCCCGCCCCCCGATTTATCTCCGGTGACAGCGATTTCAGGGCGTCTGATCTCTCTGCGCTTCTACTTCGTTTCATCAATTCCGAGACGATAACCCTTCTCTTTCATC
GACCTTACTGGTTTTTGGCATTTCTTGCTTGGGGAGTCGTAGGGTGTTTGTTGTTATTTGGATCCACTAGAGGAAGTTGTCAATACATCCTCGAAAAGAGCTGTTTGTGC
ATCATTGATTCCTGTGATTCTGAATGTGTTGCTATTGATAAGCCCTTCCATTATATTTCCCTGTTTTCACTTCCAAGCAGATGGATTTTATGTGTGTTTTTAATTGTTTT
GACATTTAGTCGCTCAGGCTTGGACATTGTTCAACGGGAATTGATTTCTAGGAAGTACAAGAATATGGGTTTAGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
AAATCGAAAAGCAGCCTCTCCCACTCTTCTCTGTTCTTTTCTTTTTTTCTCTGTGATTCCATTTCTCTTCCTCTCCTTTTCTCCATCTCCGCCAATATGCAGTCCCTTCT
CCATCCCACGCATCTAGATCTTCATCTCAAGTCCGGCCGCCGCCCACTCCAACGGAAGAATTCACTCTCAAATCATGTTCCTGCAGTCGCCAAAATCGTCAAATCCAAGG
GGGAACAGGTAGAGATCCCGCTATCCGGAGATGCCAATAAGGAGAACGAACCGCCGATTCACGCGACGGCGACGAGGACAGAGTCATGTGATTTGTCTCTGGCTGATGAA
CTCAATGCGGTTAAGATGAAGCTTGAGAGATTGAGATTAGACGGTGAACGGACGGAGAAAATGTTGAGAGAGAGGGATATGGTGTTGGAGATGCAGAGGAAGGAGATTTT
GCAGAGAAGTGAGGTGCAGAGGGATCTGGAGATGGAGGTCGACAGGTTATTCAGATTGAAGGAACTCAGATCGTACTGTATGAGGATTTCTCCGATGCGAAGTCTCAGAG
AGAAGGAGCGAGAGAAGATATTCACCGACTTACAATTTCAGGAATTTGAAACCAGCGACGAAGAAGAATCGATTGACGAGAATTCATCGTCGGATTCCTCAGAATTCAAA
GTGGCATTCATTGATTCAAAGCTTTTGATTTTGAATTGGTGGTTTTCCGATTCTCTCTCTCTCTGTCTCTCTCCGATTTCCTCGGACTCAGTACCTCTCTCTCTCTCCAA
TTCATTCCCATTTCAATGTCCTTTTTTCTATTCTTATCCCTCTTCCTCTTCTTCCCCAGTTCTTAATTTTTCCGTTTCCTTTTGGGTGTTTTTCGATCCTCCCGCCCCCC
GATTTATCTCCGGTGACAGCGATTTCAGGGCGTCTGATCTCTCTGCGCTTCTACTTCGTTTCATCAATTCCGAGACGATAACCCTTCTCTTTCATCGACCTTACTGGTTT
TTGGCATTTCTTGCTTGGGGAGTCGTAGGGTGTTTGTTGTTATTTGGATCCACTAGAGGAAGTTGTCAATACATCCTCGAAAAGAGCTGTTTGTGCATCATTGATTCCTG
TGATTCTGAATGTGTTGCTATTGATAAGCCCTTCCATTATATTTCCCTGTTTTCACTTCCAAGCAGATGGATTTTATGTGTGTTTTTAATTGTTTTGACATTTAGTCGCT
CAGGCTTGGACATTGTTCAACGGGAATTGATTTCTAGGAAGTACAAGAATATGGGTTTAGGAGGATGA
Protein sequenceShow/hide protein sequence
MQSLLHPTHLDLHLKSGRRPLQRKNSLSNHVPAVAKIVKSKGEQVEIPLSGDANKENEPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMQ
RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPMRSLREKEREKIFTDLQFQEFETSDEEESIDENSSSDSSEFKVAFIDSKLLILNWWFSDSLSLCLSPISSDSVP
LSLSNSFPFQCPFFYSYPSSSSSPVLNFSVSFWVFFDPPAPRFISGDSDFRASDLSALLLRFINSETITLLFHRPYWFLAFLAWGVVGCLLLFGSTRGSCQYILEKSCLC
IIDSCDSECVAIDKPFHYISLFSLPSRWILCVFLIVLTFSRSGLDIVQRELISRKYKNMGLGG