CuGenDBv2

Gene ID	CmaCh07G013060
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	WD_REPEATS_REGION domain-containing protein
Genome location	Cma_Chr07:7399968..7400330
RNA-Seq Expression	CmaCh07G013060
Synteny	CmaCh07G013060
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022151653.1 uncharacterized protein LOC111019565 [Momordica charantia]

2.0e-58

91.67

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PF  ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGSSESD
        LERLEMEN+ IS SGSSESD
Subjt:  LERLEMENLAISGSGSSESD

XP_022925065.1 uncharacterized protein LOC111432424 [Cucurbita moschata]

3.0e-62

98.33

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGSSESD
        LERLEMENLA+SGSGSSESD
Subjt:  LERLEMENLAISGSGSSESD

XP_022966491.1 uncharacterized protein LOC111466129 [Cucurbita maxima]

4.7e-63

100

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGSSESD
        LERLEMENLAISGSGSSESD
Subjt:  LERLEMENLAISGSGSSESD

XP_023517134.1 uncharacterized protein LOC111780983 [Cucurbita pepo subsp. pepo]

1.5e-61

97.5

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGSSESD
        LERLEMENLA+S SGSSESD
Subjt:  LERLEMENLAISGSGSSESD

XP_038881129.1 uncharacterized protein LOC120072731 [Benincasa hispida]

2.4e-59

93.33

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA GQSRWTSPGHE++PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGSSESD
        LERLEME L +SGSGSSESD
Subjt:  LERLEMENLAISGSGSSESD

TrEMBL top hits

e value

%identity

Alignment

A0A067KZT1 Uncharacterized protein

6.2e-53

86.44

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PF TAS MLR RL  SLRTRGG A G SRWTSPGHEE+PKGYLFNRTPPP GQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGSSE
        LERLEME L +SGSG SE
Subjt:  LERLEMENLAISGSGSSE

A0A6J1DCT8 uncharacterized protein LOC111019565

9.9e-59

91.67

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PF  ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGSSESD
        LERLEMEN+ IS SGSSESD
Subjt:  LERLEMENLAISGSGSSESD

A0A6J1EGU8 uncharacterized protein LOC111432424

1.5e-62

98.33

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGSSESD
        LERLEMENLA+SGSGSSESD
Subjt:  LERLEMENLAISGSGSSESD

A0A6J1HPH2 uncharacterized protein LOC111466129

2.3e-63

100

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGSSESD
        LERLEMENLAISGSGSSESD
Subjt:  LERLEMENLAISGSGSSESD

I3NMS3 Uncharacterized protein

1.1e-52

86.44

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS  PF TAS+MLR RL  SLRTRGGAA G SRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGSSE
        LERLEME L  SGSG SE
Subjt:  LERLEMENLAISGSGSSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42310.1 unknown protein

1.7e-42

68.97

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS      A+  LR+R+       G  + G SRW +PGHEE+PKGY  NRTPP PGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGS
        LERLEME LA +G  S
Subjt:  LERLEMENLAISGSGS

AT3G57785.1 unknown protein

1.5e-43

71.55

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        M S  P   A+  LR+R+    R+ G  +TG SRW +PGHEE+PKGY  NRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAISGSGS
        LERLEME LA +G  S
Subjt:  LERLEMENLAISGSGS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCCCTCCCCAACGCCCTTTGCAACCGCCTCAAATATGCTCCGGCACCGCCTTCTCCCTTCTCTCAGGACCCGCGGTGGCGCCGCCACAGGCCAGAGCCGGTGGACCAG
TCCCGGCCACGAGGAGCAGCCAAAGGGCTATCTTTTCAATCGGACGCCGCCTCCGCCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATGTTACTAGTT
TTCTTACTATCGTGATTCTTGGCGTTGGCCTCAACGCCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAGGCCCTAGAGCGTCTTGAGATGGAGAATCTGGCT
ATTTCTGGCTCTGGATCATCTGAATCTGATTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLA
ISGSGSSESD

CmaCh07G013060 (gene) of Cucurbita maxima (Rimu) v1.1 genome