; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh08G000980 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G000980
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptiontranscription factor IBH1
Genome locationCma_Chr08:523742..524197
RNA-Seq ExpressionCmaCh08G000980
SyntenyCmaCh08G000980
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575326.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3969.39Show/hide
Query:  MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAY
        MA +SG TP+ S+SS+LRLARTFLRSF+ IKS+ P  A   S  ELRRRSRRIK+ AYSSMAR AGP+  WARALLFKL TRARHRT + RR     S  
Subjt:  MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAY

Query:  PDDHVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHH
         DD VGKLRRLVPGG+ MDVCTLLEET +YI CLSAQVKVM AI  H
Subjt:  PDDHVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHH

KAG6592893.1 hypothetical protein SDJN03_12369, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4395.28Show/hide
Query:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDDHVGKLR
        MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMAR AGPQR WARALLFKLNTRARHRT MRRR STMPSAYPDDHVGKLR
Subjt:  MNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDDHVGKLR

Query:  RLVPGG
        RL+PGG
Subjt:  RLVPGG

KAG7025295.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-6894.7Show/hide
Query:  MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAY
        MA ESG TPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQR WARALLFKLNTRARH T MRRR STMPSAY
Subjt:  MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAY

Query:  PDDHVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSKN
        PDDHVGKLRRL+PGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLS N
Subjt:  PDDHVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSKN

XP_008464343.1 PREDICTED: transcription factor IBH1 [Cucumis melo]5.7e-4269.39Show/hide
Query:  ESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDD
        +S IT +NS+SS  R ARTFLR FSRIKS+R  T AS    +L+R+S+RIK+ AYSSMARVAGP+R WARALLFKL TR RHRT MRR+    PS  PDD
Subjt:  ESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDD

Query:  HVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIA-HHLS
         VGKLRRL+PGG+ MDVCTLLEETA+YIHCLS QVKVM AI+  HLS
Subjt:  HVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIA-HHLS

XP_023005092.1 transcription factor IBH1 [Cucurbita maxima]8.8e-75100Show/hide
Query:  MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAY
        MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAY
Subjt:  MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAY

Query:  PDDHVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSKN
        PDDHVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSKN
Subjt:  PDDHVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSKN

TrEMBL top hitse value%identityAlignment
A0A0A0KDQ3 Uncharacterized protein3.6e-3462.16Show/hide
Query:  ESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDD
        +S IT +NS+SS L  ART              T AS    +L+R+SRRIK+AAYSSMARVAG +R WARALLF+L+TR RH+T MRR+    PS   DD
Subjt:  ESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDD

Query:  HVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIA-HHLSK
         VGKLRRL+PGG+ MDVCTLLEETA+YIHCLS QVKVM AI+ HHLSK
Subjt:  HVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIA-HHLSK

A0A1S3CLD3 transcription factor IBH12.8e-4269.39Show/hide
Query:  ESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDD
        +S IT +NS+SS  R ARTFLR FSRIKS+R  T AS    +L+R+S+RIK+ AYSSMARVAGP+R WARALLFKL TR RHRT MRR+    PS  PDD
Subjt:  ESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDD

Query:  HVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIA-HHLS
         VGKLRRL+PGG+ MDVCTLLEETA+YIHCLS QVKVM AI+  HLS
Subjt:  HVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIA-HHLS

A0A5D3BPL2 Transcription factor IBH12.8e-4269.39Show/hide
Query:  ESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDD
        +S IT +NS+SS  R ARTFLR FSRIKS+R  T AS    +L+R+S+RIK+ AYSSMARVAGP+R WARALLFKL TR RHRT MRR+    PS  PDD
Subjt:  ESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDD

Query:  HVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIA-HHLS
         VGKLRRL+PGG+ MDVCTLLEETA+YIHCLS QVKVM AI+  HLS
Subjt:  HVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIA-HHLS

A0A6J1KS83 transcription factor IBH14.3e-75100Show/hide
Query:  MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAY
        MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAY
Subjt:  MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAY

Query:  PDDHVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSKN
        PDDHVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSKN
Subjt:  PDDHVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSKN

A0A7N2RCD6 Uncharacterized protein4.3e-2752Show/hide
Query:  GITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRC---STMPSAYPD
        G+T +N++S  ++ AR F+R+  +++   P   +S S  E+R+RS+RIKIAAYSSMA   G +R W+RA+LFKL  RARH   MRRR      + +  P 
Subjt:  GITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRC---STMPSAYPD

Query:  D--HVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSK
        D     KLR+LVPGG  MD+C+LLEETA YI CLS QVKVM  IA HLSK
Subjt:  D--HVGKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSK

SwissProt top hitse value%identityAlignment
Q01I07 Transcription factor IBH11.2e-1339.26Show/hide
Query:  LARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSM-------RRRCSTMPSAYPDDHVG-----
        LA  FLR+ SRI    P T          RR+R I+ AAYSSMAR A P+R W+RALL +   R R RT M       RRR    P+  P    G     
Subjt:  LARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSM-------RRRCSTMPSAYPDDHVG-----

Query:  -------------------------KLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAI
                                  LRRLVPGG GM+  +LLEETADY+  L AQV++M  +
Subjt:  -------------------------KLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAI

Q7XR02 Transcription factor IBH16.9e-1439.26Show/hide
Query:  LARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSM-------RRRCSTMPSAYPDDHVG-----
        LA  FLR+ SRI    P T          RR+R I+ AAYSSMAR A P+R W+RALL ++  R R RT M       RRR    P+  P    G     
Subjt:  LARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSM-------RRRCSTMPSAYPDDHVG-----

Query:  -------------------------KLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAI
                                  LRRLVPGG GM+  +LLEETADY+  L AQV++M  +
Subjt:  -------------------------KLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAI

Q9SKX1 Transcription factor IBH11.8e-1440.15Show/hide
Query:  FLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVA-GPQRTWARALLFKLN---------TRARHRTSMRRRCSTMPSAYPDDHVGKLRRLV
        FL+S S ++ + P     +  +    R R+IK AAY SMAR A G  R W+RALL + +         +R + + S +RR S   +   ++   +LR LV
Subjt:  FLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVA-GPQRTWARALLFKLN---------TRARHRTSMRRRCSTMPSAYPDDHVGKLRRLV

Query:  PGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLS
        PGG GM+   L+EETA YI CLS QVKVM  +   LS
Subjt:  PGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLS

Arabidopsis top hitse value%identityAlignment
AT2G43060.1 ILI1 binding bHLH 11.3e-1540.15Show/hide
Query:  FLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVA-GPQRTWARALLFKLN---------TRARHRTSMRRRCSTMPSAYPDDHVGKLRRLV
        FL+S S ++ + P     +  +    R R+IK AAY SMAR A G  R W+RALL + +         +R + + S +RR S   +   ++   +LR LV
Subjt:  FLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVA-GPQRTWARALLFKLN---------TRARHRTSMRRRCSTMPSAYPDDHVGKLRRLV

Query:  PGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLS
        PGG GM+   L+EETA YI CLS QVKVM  +   LS
Subjt:  PGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLS

AT3G05800.1 AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 11.0e-0431.5Show/hide
Query:  AFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPS-------------------AYPDDHVGKLRRLVPGGDGMDVCTL
        A +  RRS  ++  A   +A  A     W+RA+L      +R  TS+RRR +T P+                   +   + V  L  LVPG     +  L
Subjt:  AFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPS-------------------AYPDDHVGKLRRLVPGGDGMDVCTL

Query:  LEETADYIHCLSAQVKVMNAIAHHLSK
        L+ETADYI  L  QV+ M A++  LS+
Subjt:  LEETADYIHCLSAQVKVMNAIAHHLSK

AT3G06590.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.9e-0429.86Show/hide
Query:  RRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALL---FKLNTRARHR-------------------TSMRRRCSTM---PSAYPDDH--V
        R  ++A++ S+   ++R + ++ AA  ++A  A  +  W+RA+L    KL  R + R                    S +RR S +     + PD +  V
Subjt:  RRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALL---FKLNTRARHR-------------------TSMRRRCSTM---PSAYPDDH--V

Query:  GKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLS
          L RLVPG     V  +LEE  DYI  L  QV+ MN++   LS
Subjt:  GKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLS

AT3G06590.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.9e-0429.86Show/hide
Query:  RRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALL---FKLNTRARHR-------------------TSMRRRCSTM---PSAYPDDH--V
        R  ++A++ S+   ++R + ++ AA  ++A  A  +  W+RA+L    KL  R + R                    S +RR S +     + PD +  V
Subjt:  RRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALL---FKLNTRARHR-------------------TSMRRRCSTM---PSAYPDDH--V

Query:  GKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLS
          L RLVPG     V  +LEE  DYI  L  QV+ MN++   LS
Subjt:  GKLRRLVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTATGAATCCGGTATAACCCCGATGAATTCCTCTTCATCTTCTCTCCGACTAGCTCGAACCTTCCTCCGGTCCTTCTCCCGGATCAAATCCCGAAGACCCACCAC
TGCGGCCTCTCGGTCCGCTTTCGAGCTTAGACGCCGGAGTCGACGGATAAAAATCGCAGCCTACTCCTCCATGGCTCGCGTGGCTGGGCCACAACGGACATGGGCTAGAG
CCCTCCTCTTCAAGCTCAATACTCGAGCTAGACATAGGACTTCGATGAGACGCCGCTGTTCAACCATGCCCTCGGCCTACCCCGACGACCATGTCGGGAAGCTCCGCCGC
TTAGTTCCGGGTGGCGACGGAATGGACGTGTGCACCTTGCTGGAGGAAACTGCCGACTACATCCATTGCCTCTCCGCGCAGGTTAAGGTCATGAATGCCATAGCTCATCA
TTTATCAAAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTATGAATCCGGTATAACCCCGATGAATTCCTCTTCATCTTCTCTCCGACTAGCTCGAACCTTCCTCCGGTCCTTCTCCCGGATCAAATCCCGAAGACCCACCAC
TGCGGCCTCTCGGTCCGCTTTCGAGCTTAGACGCCGGAGTCGACGGATAAAAATCGCAGCCTACTCCTCCATGGCTCGCGTGGCTGGGCCACAACGGACATGGGCTAGAG
CCCTCCTCTTCAAGCTCAATACTCGAGCTAGACATAGGACTTCGATGAGACGCCGCTGTTCAACCATGCCCTCGGCCTACCCCGACGACCATGTCGGGAAGCTCCGCCGC
TTAGTTCCGGGTGGCGACGGAATGGACGTGTGCACCTTGCTGGAGGAAACTGCCGACTACATCCATTGCCTCTCCGCGCAGGTTAAGGTCATGAATGCCATAGCTCATCA
TTTATCAAAAAATTGA
Protein sequenceShow/hide protein sequence
MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDDHVGKLRR
LVPGGDGMDVCTLLEETADYIHCLSAQVKVMNAIAHHLSKN