; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh08G001850 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G001850
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionselenoprotein F-like
Genome locationCma_Chr08:1039839..1044871
RNA-Seq ExpressionCmaCh08G001850
SyntenyCmaCh08G001850
Gene Ontology termsGO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR014912 - Selenoprotein F/M domain
IPR036249 - Thioredoxin-like superfamily
IPR038219 - Selenoprotein F/M, thioredoxin-like domain superfamily
IPR039992 - Selenoprotein F/M


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592972.1 Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]8.0e-9497.19Show/hide
Query:  RSTVDTEMQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGA
        RSTVDTEMQLF DVK+PATVV MAAW AAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGA
Subjt:  RSTVDTEMQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGA

Query:  VLEVCMRKLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        VLEVCMRKLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  VLEVCMRKLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

KAG7025384.1 Selenoprotein F [Cucurbita argyrosperma subsp. argyrosperma]9.2e-9097.08Show/hide
Query:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLF DVK+PATVV MAAW AAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

XP_022960129.1 selenoprotein F-like [Cucurbita moschata]1.1e-9098.25Show/hide
Query:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLFADVKKPATVVAMAAW AAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

XP_023004122.1 selenoprotein F-like [Cucurbita maxima]9.8e-92100Show/hide
Query:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

XP_023513576.1 selenoprotein F-like [Cucurbita pepo subsp. pepo]2.0e-8996.49Show/hide
Query:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQ+F DVK+PATVV MAAW AAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

TrEMBL top hitse value%identityAlignment
A0A1S3CC00 15 kDa selenoprotein3.5e-7987.72Show/hide
Query:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQL   V  PAT V +    AAIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCC EDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEE+KD+FPSVKVQY FNSPPKL LLDDEGQHKESIRIDNWKREH LQFLQ+KVK SSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

A0A6J1GQK6 selenoprotein F-like3.9e-7887.65Show/hide
Query:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQL   VK PAT+V MA    AIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV DCLKCCTEDSDDATSKITYSGA+LEVCMR
Subjt:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA
        KLVFYPEIVGFIEEEKD+FPSV VQY FNSPPKL LLDDEGQHKESIRIDNWKREHILQFL++KVK  S+
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA

A0A6J1HA08 selenoprotein F-like5.2e-9198.25Show/hide
Query:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLFADVKKPATVVAMAAW AAIIF+ASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVK+QYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

A0A6J1JXH9 selenoprotein F-like4.3e-7787.06Show/hide
Query:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQL   VK PAT+V MA    AIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV DCLKCCTEDSDDATSKITYSGA+LEVCMR
Subjt:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA
        KLVFYPEIVGFIEEEK +FPSV VQY FNSPPKL LLDDEGQHKESIRIDNWKREHILQFL++KVK  S+
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA

A0A6J1KPJ2 selenoprotein F-like4.7e-92100Show/hide
Query:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
        MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
        KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI
Subjt:  KLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI

SwissProt top hitse value%identityAlignment
A1Z623 Selenoprotein F1.5e-1836.64Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLT
        + SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLT

Query:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK
        LLDD G   E + I  W  + + +FL +K++
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK

A8YXY3 Selenoprotein F3.9e-1936.64Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLT
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLT

Query:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK
        LLDD G   E + I  W  + + +FL +K++
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK

O60613 Selenoprotein F6.7e-1936.64Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLT
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLT

Query:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK
        LLDD G   E + I  W  + + +FL +K++
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK

Q802F3 Selenoprotein F1.1e-1836.64Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLT
        +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA+LEVC  KL  +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLT

Query:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK
        LLDD G   E + I  W  + + +FL +K++
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK

Q923V8 Selenoprotein F1.7e-1735.88Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLT
        + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLT

Query:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK
        LLDD G   E + I  W  + + +FL +K++
Subjt:  LLDDEGQHKESIRIDNWKREHILQFLQDKVK

Arabidopsis top hitse value%identityAlignment
AT1G05720.1 selenoprotein family protein1.3e-6569.75Show/hide
Query:  KPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEI
        K   +  M   +A +I I +  ++ +KEQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELV+DCLKCC +DS+D+ SK+TYSGA+LEVCMRKLVFYPEI
Subjt:  KPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKITYSGAVLEVCMRKLVFYPEI

Query:  VGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA
        VGFIEEEK+KFPSVKVQYIFNSPPKL +LD++G+HKESIRIDNWKREH+LQ++++KVK ++A
Subjt:  VGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTGGCTTCTTCCCCACGGTCGACGGTCGACGGTCGACACAGAGATGCAGCTATTCGCCGATGTAAAGAAGCCCGCTACGGTGGTGGCAATGGCGGCATGG
ACGGCGGCGATAATTTTTATTGCGTCGATGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCTCGAGAGAATGTGAGGATCTAGGTTTCACTGGCCTCGCTCTCTGT
TCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTGGCAGACTGTTTGAAGTGTTGCACGGAGGATTCTGATGATGCCACGAGTAAGATAACT
TATTCTGGTGCTGTACTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATAAATTCCCTTCAGTTAAGGTT
CAATATATCTTCAACTCTCCGCCGAAGCTGACTTTGCTGGATGATGAAGGCCAACATAAAGAGAGCATCAGGATTGATAACTGGAAACGTGAACATATTTTGCAG
TTCCTGCAAGATAAGGTTAAGCTATCTTCAGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTGGCTTCTTCCCCACGGTCGACGGTCGACGGTCGACACAGAGATGCAGCTATTCGCCGATGTAAAGAAGCCCGCTACGGTGGTGGCAATGGCGGCATGG
ACGGCGGCGATAATTTTTATTGCGTCGATGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCTCGAGAGAATGTGAGGATCTAGGTTTCACTGGCCTCGCTCTCTGT
TCTGATTGCCACACTTTAGCTGAATACATCAAAGATCAAGAATTAGTGGCAGACTGTTTGAAGTGTTGCACGGAGGATTCTGATGATGCCACGAGTAAGATAACT
TATTCTGGTGCTGTACTGGAGGTCTGCATGAGGAAGCTAGTTTTCTATCCTGAAATTGTTGGCTTCATTGAAGAAGAAAAGGATAAATTCCCTTCAGTTAAGGTT
CAATATATCTTCAACTCTCCGCCGAAGCTGACTTTGCTGGATGATGAAGGCCAACATAAAGAGAGCATCAGGATTGATAACTGGAAACGTGAACATATTTTGCAG
TTCCTGCAAGATAAGGTTAAGCTATCTTCAGCAATTTAAGGTTTCTCATCTTCCTTGTTTTTTTTTTTTTTTTTTTTCCCTTTTATATCCCTGTAAAAAACTCTT
AAAGTCTAATTGTTATATTGTAGTTTTCTTTGATACTGCAATATGTTAGTATCGTATGTTTTTCTGTGTTTGGGTAAATTTTATGTTTAATTTCACA
Protein sequenceShow/hide protein sequence
MTWLLPHGRRSTVDTEMQLFADVKKPATVVAMAAWTAAIIFIASMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCTEDSDDATSKIT
YSGAVLEVCMRKLVFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLTLLDDEGQHKESIRIDNWKREHILQFLQDKVKLSSAI