; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh08G005260 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G005260
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionNuclear transcription factor Y subunit
Genome locationCma_Chr08:3030325..3033469
RNA-Seq ExpressionCmaCh08G005260
SyntenyCmaCh08G005260
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593299.1 Nuclear transcription factor Y subunit A-9, partial [Cucurbita argyrosperma subsp. sororia]4.8e-15798.23Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +GHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG

KAG7025650.1 Nuclear transcription factor Y subunit A-9 [Cucurbita argyrosperma subsp. argyrosperma]4.8e-15798.23Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +GHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG

XP_022960500.1 nuclear transcription factor Y subunit A-1-like isoform X2 [Cucurbita moschata]9.0e-15697.53Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +GHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG

XP_023004607.1 nuclear transcription factor Y subunit A-4-like isoform X1 [Cucurbita maxima]6.4e-170100Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR

XP_023004609.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita maxima]6.4e-170100Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR

TrEMBL top hitse value%identityAlignment
A0A1S3CED9 Nuclear transcription factor Y subunit2.6e-12481.56Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPS+P  V+Q+V D AKYLLQS+KYSEPWWHGVGNNTI  EDA KTSSAEYL+VTV S A   QANDEN GKEVQHLKYIPFSTSPPVGE LD NSQMEL
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +GHSIVLTSYPFSDAQ CQMLTSYGPQ TLP  YGLHHARMPLPLEME EPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSN
        SGGRFLNTKKPN+V+SN   EEDINSG NH ++PVSE GS YMV +E G+K+TLD   ++ +E M QNMQITHAFFN GKSN
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSN

A0A6J1H7S4 Nuclear transcription factor Y subunit4.4e-15697.53Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +GHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG

A0A6J1HB71 Nuclear transcription factor Y subunit4.4e-15697.53Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEV DGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYL+VTVTSAAMLSQANDENTGKEVQHLKYIPFSTSP VGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        +GHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI+SRKPYLHESRHLHAMRRARG
Subjt:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSE GSNYMVANENGMKDTLD QQKEDKEFMPQNMQITHAFFNGGKSNG
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNG

A0A6J1KWS3 Nuclear transcription factor Y subunit3.1e-170100Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR

A0A6J1L019 Nuclear transcription factor Y subunit3.1e-170100Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
        MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMEL

Query:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
        IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG
Subjt:  IGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARG

Query:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR
        SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR
Subjt:  SGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-73.8e-2463.74Show/hide
Query:  GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDIN
        G+    +PLP +   EPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG GGRFLN KK +    + + EE  N
Subjt:  GLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDIN

Q8LFU0 Nuclear transcription factor Y subunit A-105.9e-2534.6Show/hide
Query:  PWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELIGHSIVLTSYPFSDAQCCQMLTSYGPQ
        PWW+  G+  +T E  +  +S  +  V   +        D+ T   +         T  P GE+   +     +  ++    + F  AQ       Y   
Subjt:  PWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELIGHSIVLTSYPFSDAQCCQMLTSYGPQ

Query:  TTLPHFYGLHHA--------RMPLPLEMEAE---PVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVIS
          +  +YG+  A        R+ +PL+ME E    +YVN+KQYHGI+RRRQSRAKAE   K+ + RKPY+H SRHLHAMRR RGSGGRFLNTK  ++   
Subjt:  TTLPHFYGLHHA--------RMPLPLEMEAE---PVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVIS

Query:  NKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDT
        +K      NS  + V  P +E+ ++   ANE+ + D+
Subjt:  NKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDT

Q8VY64 Nuclear transcription factor Y subunit A-41.3e-2440.59Show/hide
Query:  TSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNS-QMELIGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFY--------GLHHARMPLPLEM
        +S   LS  N+ +  KE    +  P   S    E +D NS   E + H +    YP+ D       + +  Q  LPH Y        G+    +PL  + 
Subjt:  TSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNS-QMELIGHSIVLTSYPFSDAQCCQMLTSYGPQTTLPHFY--------GLHHARMPLPLEM

Query:  EAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANE
          EPV+VNAKQYHGILRRRQSRAK E   + IK++KPY+HESRHLHA+RR RG GGRFLN KK N    +   EE+  S  N  SE  S   S  +    
Subjt:  EAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANE

Query:  NG
        +G
Subjt:  NG

Q945M9 Nuclear transcription factor Y subunit A-91.6e-3039.76Show/hide
Query:  PWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENT-GKEVQHLKYIPFSTSP-PVGERLDPNSQM------------ELIGHSI-VLTSYPF
        PW                  S++ + + + S    S +N +NT  KE Q       +TSP   G+  D N +             +L+GH++   +S P+
Subjt:  PWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENT-GKEVQHLKYIPFSTSP-PVGERLDPNSQM------------ELIGHSI-VLTSYPF

Query:  SDAQCCQMLTSYG--PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK
         D     ++ +YG  P   +P + G+ H+RMPLP EM  EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK
Subjt:  SDAQCCQMLTSYG--PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK

Query:  PNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEF
         N+  S +  EE  N    HV++  S S S+   A  NG   T  G + +   +
Subjt:  PNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEF

Q9LXV5 Nuclear transcription factor Y subunit A-11.5e-2836.5Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITD-EDATKTSSAEYLDV-------TVTSAAMLSQANDENTG--KEVQHL-------KYIPFS
        M SKPG   +E V+    + Q   Y+EPWW       +     +   S++  LD         V SA+     N EN G  K+ Q          +    
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITD-EDATKTSSAEYLDV-------TVTSAAMLSQANDENTG--KEVQHL-------KYIPFS

Query:  TSPPVGERLDPNSQM----ELIGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV
          P +  R   +  +    EL+GH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  TSPPVGERLDPNSQM----ELIGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSN
        I+ RKPYLHESRH HAMRRAR SGGRF    +  +       + +  S  N       E+ SN
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSN

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.1e-3139.76Show/hide
Query:  PWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENT-GKEVQHLKYIPFSTSP-PVGERLDPNSQM------------ELIGHSI-VLTSYPF
        PW                  S++ + + + S    S +N +NT  KE Q       +TSP   G+  D N +             +L+GH++   +S P+
Subjt:  PWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENT-GKEVQHLKYIPFSTSP-PVGERLDPNSQM------------ELIGHSI-VLTSYPF

Query:  SDAQCCQMLTSYG--PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK
         D     ++ +YG  P   +P + G+ H+RMPLP EM  EPV+VNAKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK
Subjt:  SDAQCCQMLTSYG--PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK

Query:  PNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEF
         N+  S +  EE  N    HV++  S S S+   A  NG   T  G + +   +
Subjt:  PNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEF

AT5G12840.1 nuclear factor Y, subunit A11.1e-2936.5Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITD-EDATKTSSAEYLDV-------TVTSAAMLSQANDENTG--KEVQHL-------KYIPFS
        M SKPG   +E V+    + Q   Y+EPWW       +     +   S++  LD         V SA+     N EN G  K+ Q          +    
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITD-EDATKTSSAEYLDV-------TVTSAAMLSQANDENTG--KEVQHL-------KYIPFS

Query:  TSPPVGERLDPNSQM----ELIGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV
          P +  R   +  +    EL+GH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  TSPPVGERLDPNSQM----ELIGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSN
        I+ RKPYLHESRH HAMRRAR SGGRF    +  +       + +  S  N       E+ SN
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSN

AT5G12840.2 nuclear factor Y, subunit A13.7e-3036.26Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITD-EDATKTSSAEYLDV-------TVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERL
        M SKPG   +E V+    + Q   Y+EPWW       +     +   S++  LD         V SA+     N EN G            +     E  
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITD-EDATKTSSAEYLDV-------TVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERL

Query:  DPNSQM------------ELIGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI
        DP   +            EL+GH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KVI
Subjt:  DPNSQM------------ELIGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI

Query:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSN
        + RKPYLHESRH HAMRRAR SGGRF    +  +       + +  S  N       E+ SN
Subjt:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSN

AT5G12840.3 nuclear factor Y, subunit A11.1e-2936.5Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITD-EDATKTSSAEYLDV-------TVTSAAMLSQANDENTG--KEVQHL-------KYIPFS
        M SKPG   +E V+    + Q   Y+EPWW       +     +   S++  LD         V SA+     N EN G  K+ Q          +    
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITD-EDATKTSSAEYLDV-------TVTSAAMLSQANDENTG--KEVQHL-------KYIPFS

Query:  TSPPVGERLDPNSQM----ELIGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV
          P +  R   +  +    EL+GH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KV
Subjt:  TSPPVGERLDPNSQM----ELIGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKV

Query:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSN
        I+ RKPYLHESRH HAMRRAR SGGRF    +  +       + +  S  N       E+ SN
Subjt:  IKSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSN

AT5G12840.4 nuclear factor Y, subunit A13.7e-3036.26Show/hide
Query:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITD-EDATKTSSAEYLDV-------TVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERL
        M SKPG   +E V+    + Q   Y+EPWW       +     +   S++  LD         V SA+     N EN G            +     E  
Subjt:  MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITD-EDATKTSSAEYLDV-------TVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERL

Query:  DPNSQM------------ELIGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI
        DP   +            EL+GH I     P+ D     ++ +YG  Q     + G+   R  LPL+M  EPVYVNAKQY GILRRR++RAKAELE+KVI
Subjt:  DPNSQM------------ELIGHSIVLTSYPFSDAQCCQMLTSYG-PQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVI

Query:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSN
        + RKPYLHESRH HAMRRAR SGGRF    +  +       + +  S  N       E+ SN
Subjt:  KSRKPYLHESRHLHAMRRARGSGGRFLNTKKPNSVISNKTMEEDINSGINHVSEPVSESGSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGTTGATGGGGCAAAGTATTTGCTGCAATCAACCAAATACTCTGAGCCTTGGTGGCATGGCGTTGGGAAC
AATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATATCTGGACGTTACTGTTACCAGTGCAGCTATGCTTTCACAAGCAAATGATGAAAATACT
GGGAAAGAAGTTCAGCATCTCAAGTACATTCCATTTTCGACATCCCCACCCGTGGGCGAACGCCTAGATCCAAATTCCCAGATGGAACTTATTGGCCACTCGATT
GTTTTGACATCATATCCTTTTTCAGATGCACAATGTTGTCAAATGCTGACTTCATATGGACCACAAACAACGTTACCTCATTTTTATGGACTTCACCATGCTAGG
ATGCCATTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCGCGTGCCAAAGCTGAGCTTGAG
AAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGGAGGACGTTTCCTGAATACCAAAAAG
CCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGAGTGGATCAAATTACATGGTGGCT
AATGAAAATGGAATGAAGGATACACTTGATGGTCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACACGCTTTCTTCAATGGTGGAAAG
TCGAATGGCCAGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGA
mRNA sequenceShow/hide mRNA sequence
CCCTCTCCGTTTTAATTTCCTTCTCTCTGTTACCTTCCACTGCCACTGCGCGCAGAGAGGGGAGAGAGAGAGAGTAATGGAGCTGAGCTAGAAAACCAGAGCGAC
TTGCGAAGCTAAAGCTTTTCTAGGGTTCGATCGTCTGTTTCACATCACAGTTTTCATTTGCTGCATGATTTTCGGCAACCAGAGAAATATATCTATAGAGCCTCT
GTTTTGGATCTATGGAAATTGCTGAGATTGAAGTTTGTGTAGTCTGTTTTGGATGTATATCTCATGATATCTTGAAGCCCTGTAATGTTTTGTAGATGAGTTATA
TGGATCTCTGATGAGTTTCTGTCCCCATTGAATGATCATCCGGCATTCTGGAGCTCTTCAATGATTTTGAGACGTGAGGAATTTCCGGGTTGCTTAGGGTTATAG
AACTGGAACAAGTTTCAAACAATGCCCTCAAAACCAGGAATTGTAGAACAAGAAGTTGTTGATGGGGCAAAGTATTTGCTGCAATCAACCAAATACTCTGAGCCT
TGGTGGCATGGCGTTGGGAACAATACCATCACTGATGAAGATGCTACCAAAACATCTTCTGCTGAATATCTGGACGTTACTGTTACCAGTGCAGCTATGCTTTCA
CAAGCAAATGATGAAAATACTGGGAAAGAAGTTCAGCATCTCAAGTACATTCCATTTTCGACATCCCCACCCGTGGGCGAACGCCTAGATCCAAATTCCCAGATG
GAACTTATTGGCCACTCGATTGTTTTGACATCATATCCTTTTTCAGATGCACAATGTTGTCAAATGCTGACTTCATATGGACCACAAACAACGTTACCTCATTTT
TATGGACTTCACCATGCTAGGATGCCATTACCCCTTGAAATGGAAGCAGAGCCTGTTTATGTGAACGCAAAGCAGTATCATGGTATCCTGAGGAGAAGACAGTCG
CGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATATCTTCATGAATCCAGACATCTCCATGCTATGAGACGAGCAAGAGGCAGCGGAGGA
CGTTTCCTGAATACCAAAAAGCCGAACAGTGTTATTTCCAATAAAACTATGGAGGAAGACATCAATTCTGGTATCAACCATGTATCAGAACCTGTCAGTGAGAGT
GGATCAAATTACATGGTGGCTAATGAAAATGGAATGAAGGATACACTTGATGGTCAACAAAAGGAGGACAAAGAGTTCATGCCTCAAAATATGCAGATAACACAC
GCTTTCTTCAATGGTGGAAAGTCGAATGGCCAGGTTTATCCACATACAATTCAAAACTTGCTGATGAAAGCATGCAGGTGAATGCGGCTCCACAGAGGGCCGTCC
CCATCAAGTGAAAGTTTCTTGATGGGAATGGGGCTTCCTTCTCCAACGCTGTTTAACCAGTTTCACTGCAAAAAACTCGAGATTCAGTAAGATCGTTGAAGATCG
TTGATTCTTTTAAGGCTGTGTTTCTGGTTGCACAAGTTGGTGAATTTACCCCCTTCTCTGCTGGGAAGAACACCGCTTTTGGCTGTGTTTCTCAGGCAATTCATT
CTTGGCTTTAGTTGAAGGAGGATGAAGAAATGCAGTGCACCAAAAATGTGGTACTTTCGCTCTGCTATTTCCTTTCTCTTTACCTTTTCTATTTCCTATGTAATT
CTAATTCTGAATTGTGTCTCTGAAACACAAAGATTTGATGTGTGCAGACTCGTAATTTATTTTAGACGCAGTTATGTGCTGTGTATGTATTCAACTTTGTGTGCT
T
Protein sequenceShow/hide protein sequence
MPSKPGIVEQEVVDGAKYLLQSTKYSEPWWHGVGNNTITDEDATKTSSAEYLDVTVTSAAMLSQANDENTGKEVQHLKYIPFSTSPPVGERLDPNSQMELIGHSI
VLTSYPFSDAQCCQMLTSYGPQTTLPHFYGLHHARMPLPLEMEAEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK
PNSVISNKTMEEDINSGINHVSEPVSESGSNYMVANENGMKDTLDGQQKEDKEFMPQNMQITHAFFNGGKSNGQVYPHTIQNLLMKACR