; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh08G005590 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G005590
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCCR4-NOT transcription complex subunit like
Genome locationCma_Chr08:3190678..3193819
RNA-Seq ExpressionCmaCh08G005590
SyntenyCmaCh08G005590
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022959607.1 uncharacterized protein LOC111460632 [Cucurbita moschata]1.4e-5069.27Show/hide
Query:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY
        MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR                                                     Y
Subjt:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY

Query:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
        KNTKGLKLRQRSFSITASNSSDGNSTKE+NDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIAL VKLISTK
Subjt:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK

XP_023004845.1 uncharacterized protein LOC111498025 [Cucurbita maxima]1.6e-5170.39Show/hide
Query:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY
        MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR                                                     Y
Subjt:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY

Query:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
        KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
Subjt:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK

XP_023513741.1 uncharacterized protein LOC111778262 isoform X1 [Cucurbita pepo subsp. pepo]8.2e-7281.63Show/hide
Query:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR-YQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVL
        MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR +   C          FSSPLRS+AL TIISEDIWTVTLAMSMLTWKFICCLVL
Subjt:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR-YQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVL

Query:  ----------------YKNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
                        YKNTK LKLRQRSFSITASNSSDGNSTKE+ DGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
Subjt:  ----------------YKNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK

XP_023513742.1 uncharacterized protein LOC111778262 isoform X2 [Cucurbita pepo subsp. pepo]8.9e-5076.47Show/hide
Query:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR-YQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVL
        MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR +   C          FSSPLRS+AL TIISEDIWTVTLAMSMLTWKFICCLVL
Subjt:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR-YQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVL

Query:  ----------------YKNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVT
                        YKNTK LKLRQRSFSITASNSSDGNSTKE+ DGSKVT
Subjt:  ----------------YKNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVT

XP_023513743.1 uncharacterized protein LOC111778262 isoform X3 [Cucurbita pepo subsp. pepo]2.0e-4968.72Show/hide
Query:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY
        MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR                                                     Y
Subjt:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY

Query:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
        KNTK LKLRQRSFSITASNSSDGNSTKE+ DGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
Subjt:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK

TrEMBL top hitse value%identityAlignment
A0A6J1CV15 uncharacterized protein LOC1110150327.6e-3150.28Show/hide
Query:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY
        MAS+FAAPPSQL L S R S + +A LPSIVGVK H +GFP+PSFR                                                     +
Subjt:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY

Query:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
        ++TKGL+L QRSFSITASNSSDGNS KEE      TGDAQGPPFLTILAGFFVFSL++W++SS+ T+LI LVVKLI  K
Subjt:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK

A0A6J1GPL5 uncharacterized protein LOC1114559841.8e-3252.78Show/hide
Query:  MASVFAAPPSQLVLSSHRPSLDHKAFLP-SIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVL
        MAS+F+APPS+L L+S RPSL H A LP SI G+++H N FPIPSFR                                                     
Subjt:  MASVFAAPPSQLVLSSHRPSLDHKAFLP-SIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVL

Query:  YKNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
        Y+NTKGL+LRQRSFSITASNSSDGNS KEEN  SK + DAQGPPFLTILAG FVFSL+LW++SS+ T+LI LVVKLISTK
Subjt:  YKNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK

A0A6J1H506 uncharacterized protein LOC1114606326.6e-5169.27Show/hide
Query:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY
        MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR                                                     Y
Subjt:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY

Query:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
        KNTKGLKLRQRSFSITASNSSDGNSTKE+NDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIAL VKLISTK
Subjt:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK

A0A6J1JUC2 uncharacterized protein LOC1114884362.2e-3051.4Show/hide
Query:  MASVFAAPPSQLVLSSHRPSLDHKAFLP-SIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVL
        MAS+FAAPPS+L L+S RPSL H A LP SI G+++H N FPIPSFR                                                     
Subjt:  MASVFAAPPSQLVLSSHRPSLDHKAFLP-SIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVL

Query:  YKNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLIST
        Y+NTKGL+L  RSFSITASNSSDGNS +EEN  SK + DAQGPPFLTILAG FVFSL+LW++SS+ T+LI LVVKLIST
Subjt:  YKNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLIST

A0A6J1KVQ7 uncharacterized protein LOC1114980257.8e-5270.39Show/hide
Query:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY
        MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFR                                                     Y
Subjt:  MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLY

Query:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
        KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
Subjt:  KNTKGLKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTCTTCGCCGCGCCGCCGTCTCAACTGGTCCTCTCTTCTCACCGCCCAAGTTTGGATCACAAAGCCTTTCTTCCTTCCATCGTCGGCGTTAAATTT
CATCGGAATGGCTTTCCAATTCCTTCTTTCAGATATCAGTTTGCGTGTAATGTAATGCACCTTTGGGTTGATACCTACTTCAGCAGTCCTCTACGATCCCTCGCA
TTAGGCACAATTATTTCAGAAGATATCTGGACTGTTACCCTTGCAATGAGCATGTTAACATGGAAGTTCATCTGTTGCTTAGTTCTGTACAAGAACACCAAAGGA
TTGAAATTGAGGCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGGAATTCCACCAAGGAGGAAAATGATGGAAGTAAAGTAACTGGTGATGCCCAA
GGTCCTCCATTTCTTACCATTTTGGCTGGATTTTTTGTCTTTTCCCTCGTCCTTTGGATAGTCAGTTCCTCTGTCACAACCCTTATAGCTCTAGTCGTCAAGTTG
ATCTCAACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
TCCACACCCTCCGTGCAGCATCTCGTGCGAACTTTCCTCGTCCGAAGTTGACGAAGTCATTGTAACAAGACTGAAGGTGAATGGCTTCCGTCTTCGCCGCGCCGC
CGTCTCAACTGGTCCTCTCTTCTCACCGCCCAAGTTTGGATCACAAAGCCTTTCTTCCTTCCATCGTCGGCGTTAAATTTCATCGGAATGGCTTTCCAATTCCTT
CTTTCAGATATCAGTTTGCGTGTAATGTAATGCACCTTTGGGTTGATACCTACTTCAGCAGTCCTCTACGATCCCTCGCATTAGGCACAATTATTTCAGAAGATA
TCTGGACTGTTACCCTTGCAATGAGCATGTTAACATGGAAGTTCATCTGTTGCTTAGTTCTGTACAAGAACACCAAAGGATTGAAATTGAGGCAAAGATCTTTTT
CTATAACAGCATCAAATTCCTCAGATGGGAATTCCACCAAGGAGGAAAATGATGGAAGTAAAGTAACTGGTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGG
CTGGATTTTTTGTCTTTTCCCTCGTCCTTTGGATAGTCAGTTCCTCTGTCACAACCCTTATAGCTCTAGTCGTCAAGTTGATCTCAACAAAGTAGTGTTGCATTA
TTGGCAAAATTTCATGTTTAGTTTCCTCTCAATTATGTTTAGTTTTGGGGGAAGGACCTGAATATAGGCAGTTGATTTGGTAAGACTTAAGTACTAAATGTACAT
TGACTCATTTTGTAGTAATCTAGTTGAATCTTCTTTCTTTATATGTCATTTTCTAGAGTCGTTACCATCATTCTTATTCCCATCCAGATTAAAATCTAATGGCAA
AGGGAACAAGAACTAAATGGTACTATACTTGGACAATGATGAAGGATTTCTACAGAACAAGGTGGCAAAATATATTATCCGTTGGAGAAATTACATTCCAAACAG
TGCTGAAGCTGTAAACTTCCGCCGGTCATCAGTGGAAGCAGTTATCACCGGCATCCAAATATCAGCAGTATGACTCAAAAGAGACTGCACCTGTGGGTCAGCAGC
CATTGCTGAAGAAATCATTTCATCCACATCGTCTAGCTTTTCAGATAACTTATCCAACTCCTTCGCAAGTTCCATCTGAATAAATAGGAAATTGACTTTTTAGAC
ATTAGATTCAATCTCTTCAAGAAAATGTTGATAAATGCAATGAGTGTATGAAGGAAACCAGACGGACTTCATCGAGCTGCTTTAAGGACTTTGAGGGTACTTTTG
TTACTTCAAGTCCAAGGGCTTCGATCTTCATACGAAGCTCAACTTCCTCCTGGTTGGTCAGTGATTCCACCTGCAAGATAATTGCATCTTAGGAAAGAAAAGAGC
AGAGAAGTTCACAAAATTTCCTGGCATGGATGGATATGTCCGAGCAGGTATTTCTGACGAGGATTATTGAAAGAATTAGTCCTACATTGACTAATTAAGAAGAAG
AGCATGAGTTTATAAATAAGGAACACTATTTTTATGAGAGCTTAGACTAAAAGGTGGACAATATCTGTGGAGGGTCGTGGCTTCTTCATCAGATATTATGTTCAT
CTCCCTAAGTTACCTATTCCCAGCCTTTCCCAACCCAACTCTAGTGTAAATCTACAATGTAACGGTTCAAGCCCACTGTTAACAATATTGCCCGCCTTTGAAATT
TTTCCTCAACATTTTTAAAATGCATCTATTAGGGAGAGGTTTCCACACCCTTGTAAATAATGTTTCGTTCTCCTCCTCGTGAATGAGGTTAGATCCATCGTCCGG
ACTGAAGAATTCCAATTCATAGACAACCAATCCAATCAGGAAAAGAATCAGAAACAAGAAGAAGGTAAATGGCAGCAAATGAAATGAACATAGGGAAATAAAAGC
GAAAGTGGATGAATGAATGAGGAGGAAAATGGAGGGAAATTATGACCTGGTGAAGAAGACTGGCAAGAAGCTGGAATAGTTGCTCGTCCGCCTTCCATTTCTCG
Protein sequenceShow/hide protein sequence
MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYQFACNVMHLWVDTYFSSPLRSLALGTIISEDIWTVTLAMSMLTWKFICCLVLYKNTKG
LKLRQRSFSITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK