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CmaCh08G006060 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G006060
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionserine-rich protein-related
Genome locationCma_Chr08:3423447..3423743
RNA-Seq ExpressionCmaCh08G006060
SyntenyCmaCh08G006060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058731.1 uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa]1.7e-2671.43Show/hide
Query:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMP-PLPPP-GNQSKAASTTD---LVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASDY
        MANKTA SS RLCLCAPTTHPGSFRCSLHRR   +S+K P PLPPP G+QSKAA+TT     +KAFLMQ++KPSS  LQRR NFQPK SRFCN  +A D 
Subjt:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMP-PLPPP-GNQSKAASTTD---LVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASDY

Query:  GLAVS
         LAVS
Subjt:  GLAVS

KAG6593379.1 hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia]5.6e-4696.94Show/hide
Query:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAASTTDLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCNAASDYGLAVS
        MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKA S TDLVKAFLMQVIKPSSQDLQRRRNFQPK SRFCNAASDYGLAVS
Subjt:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAASTTDLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCNAASDYGLAVS

KAG7025727.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-4596.88Show/hide
Query:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAASTTDLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCNAASDYGLA
        MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKA S TDLVKAFLMQVIKPSSQDLQRRRNFQPK SRFCNAASDYGLA
Subjt:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAASTTDLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCNAASDYGLA

KGN45240.1 hypothetical protein Csa_016736 [Cucumis sativus]6.8e-2869.81Show/hide
Query:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPP---GNQSKAASTT---DLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASD
        M NKTA SS RLCLCAPTTHPGSFRCSLHRR+  +S+K PPLPPP   G+QSKAA+TT    L+KAFLMQ++KPSS DLQRR +F+PK SRFC+  +ASD
Subjt:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPP---GNQSKAASTT---DLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASD

Query:  YGLAVS
          LAVS
Subjt:  YGLAVS

XP_008461151.1 PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo]6.4e-2670.48Show/hide
Query:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMP-PLPPP-GNQSKAASTTD---LVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASDY
        M NKTA SS RLCLCAPTTHPGSFRCSLHRR   +S+K P PLPPP G+QSKAA+TT     +KAFLMQ++KPSS  LQRR NFQPK SRFCN  +A D 
Subjt:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMP-PLPPP-GNQSKAASTTD---LVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASDY

Query:  GLAVS
         LAVS
Subjt:  GLAVS

TrEMBL top hitse value%identityAlignment
A0A0A0K698 Uncharacterized protein3.3e-2869.81Show/hide
Query:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPP---GNQSKAASTT---DLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASD
        M NKTA SS RLCLCAPTTHPGSFRCSLHRR+  +S+K PPLPPP   G+QSKAA+TT    L+KAFLMQ++KPSS DLQRR +F+PK SRFC+  +ASD
Subjt:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPP---GNQSKAASTT---DLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASD

Query:  YGLAVS
          LAVS
Subjt:  YGLAVS

A0A1S3CEH6 uncharacterized protein LOC1034998223.1e-2670.48Show/hide
Query:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMP-PLPPP-GNQSKAASTTD---LVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASDY
        M NKTA SS RLCLCAPTTHPGSFRCSLHRR   +S+K P PLPPP G+QSKAA+TT     +KAFLMQ++KPSS  LQRR NFQPK SRFCN  +A D 
Subjt:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMP-PLPPP-GNQSKAASTTD---LVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASDY

Query:  GLAVS
         LAVS
Subjt:  GLAVS

A0A5A7UZ19 Uncharacterized protein8.1e-2771.43Show/hide
Query:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMP-PLPPP-GNQSKAASTTD---LVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASDY
        MANKTA SS RLCLCAPTTHPGSFRCSLHRR   +S+K P PLPPP G+QSKAA+TT     +KAFLMQ++KPSS  LQRR NFQPK SRFCN  +A D 
Subjt:  MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMP-PLPPP-GNQSKAASTTD---LVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN--AASDY

Query:  GLAVS
         LAVS
Subjt:  GLAVS

A0A5B7BSA6 Uncharacterized protein (Fragment)2.5e-2058.76Show/hide
Query:  NKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAASTTDLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCNA-ASDYGLAVS
        N ++ SS R CLC+PTTHPGSFRCSLHR  RK S +          SK  S T L+KAFLM +IKPSS DLQRRRNFQPK +RFC    ++ G+AVS
Subjt:  NKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAASTTDLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCNA-ASDYGLAVS

A0A6J1DD51 uncharacterized protein LOC1110193815.3e-2671.29Show/hide
Query:  MANKTAPSS---RRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAASTTDLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCNAASDYGLAV
        MA KTAPSS    RLCLCAPTTHPGSFRCSLHRR RKAS+K       G      + TDLVKAFLMQ+IKPSS DLQRRRNFQPK SRFCN  S  GLAV
Subjt:  MANKTAPSS---RRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAASTTDLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCNAASDYGLAV

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13227.1 serine-rich protein-related3.0e-0579.17Show/hide
Query:  SSRRLCLCAPTTHPGSFRCSLHRR
        S R+ CLCAPTTHPGSFRC  HRR
Subjt:  SSRRLCLCAPTTHPGSFRCSLHRR

AT5G11090.1 serine-rich protein-related3.8e-0837.93Show/hide
Query:  RLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPG--NQSKAASTTDL----------VKAFLMQVIKPSSQDLQRRRNFQPKLSR
        R C+C+PTTHPGSFRCSLH+ +     +          N  ++A T  L          V+  L  +I+PSS  L+RR  +QP+ SR
Subjt:  RLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPG--NQSKAASTTDL----------VKAFLMQVIKPSSQDLQRRRNFQPKLSR

AT5G20370.1 serine-rich protein-related8.4e-0834.62Show/hide
Query:  SRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAAST------TDLVKAFLM--------------------QVIKPSSQDLQRRRNFQPK
        ++R CLC+PTTHPGSFRCS HRR+    +K          ++  +T       +L K  LM                     + KPSS    RR  F+P+
Subjt:  SRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAAST------TDLVKAFLM--------------------QVIKPSSQDLQRRRNFQPK

Query:  LSRF
        LSRF
Subjt:  LSRF

AT5G25280.1 serine-rich protein-related6.8e-1037.23Show/hide
Query:  PSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPG--NQSKAASTTDL----------VKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN
        P SRR C+C+PTTHPGSFRCSLH+ +     +          N  ++A T  L          V+  L  +I+PSS  L+RR  ++P+ SR  +
Subjt:  PSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPG--NQSKAASTTDL----------VKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN

AT5G25280.2 serine-rich protein-related6.8e-1037.23Show/hide
Query:  PSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPG--NQSKAASTTDL----------VKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN
        P SRR C+C+PTTHPGSFRCSLH+ +     +          N  ++A T  L          V+  L  +I+PSS  L+RR  ++P+ SR  +
Subjt:  PSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPG--NQSKAASTTDL----------VKAFLMQVIKPSSQDLQRRRNFQPKLSRFCN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACAAAACCGCTCCTTCTTCCCGCCGCCTCTGTCTCTGTGCTCCGACCACTCACCCTGGCTCCTTCCGCTGCAGCCTCCACCGTCGTATGCGGAAGGCC
TCCAACAAAATGCCGCCGCTTCCTCCGCCTGGAAACCAATCGAAGGCCGCCTCCACGACAGATCTCGTTAAGGCGTTTCTTATGCAGGTAATCAAGCCGTCGAGT
CAAGATCTCCAGAGAAGGAGGAATTTCCAGCCTAAGCTTTCTCGATTCTGTAATGCCGCTTCCGACTATGGATTGGCGGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACAAAACCGCTCCTTCTTCCCGCCGCCTCTGTCTCTGTGCTCCGACCACTCACCCTGGCTCCTTCCGCTGCAGCCTCCACCGTCGTATGCGGAAGGCC
TCCAACAAAATGCCGCCGCTTCCTCCGCCTGGAAACCAATCGAAGGCCGCCTCCACGACAGATCTCGTTAAGGCGTTTCTTATGCAGGTAATCAAGCCGTCGAGT
CAAGATCTCCAGAGAAGGAGGAATTTCCAGCCTAAGCTTTCTCGATTCTGTAATGCCGCTTCCGACTATGGATTGGCGGTTTCTTGA
Protein sequenceShow/hide protein sequence
MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAASTTDLVKAFLMQVIKPSSQDLQRRRNFQPKLSRFCNAASDYGLAVS