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CmaCh08G006200 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh08G006200
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionSodium channel protein type 10 subunit alpha like
Genome locationCma_Chr08:3481646..3484377
RNA-Seq ExpressionCmaCh08G006200
SyntenyCmaCh08G006200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593392.1 hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sororia]2.5e-6597.71Show/hide
Query:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MA+PSLSTSNALYHPSRAVTAPAIAIPLFSSFHA PEISFSPLHHRRSSLLLS NPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
Subjt:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
XP_022959617.1 uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata]6.1e-6496.95Show/hide
Query:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MA+PSLSTSNALYHPSRAVTAPAIAIPLFSSFHA PEISFSPLHHRRSSLLLS NP AKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
Subjt:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
XP_023004358.1 uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima]2.0e-67100Show/hide
Query:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
Subjt:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
XP_023513765.1 uncharacterized protein LOC111778275 isoform X1 [Cucurbita pepo subsp. pepo]4.6e-6496.95Show/hide
Query:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHA PEISFSPLHHRRSSLLLS NPCAKSAVC AAVRPPPDSDPPPDEDPIRLKGF AIFSKFGDRVQI
Subjt:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
XP_038899182.1 uncharacterized protein LOC120086544 [Benincasa hispida]8.2e-4578.51Show/hide
Query:  ALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSL
        +L+  S++VTA +IA+PL S+FHARPEI FS    R S LLLS + C KSAVC+AAVRPPPDSDPPP+EDPIRLKGFPAI SKF DRVQIFFAVLFWMSL
Subjt:  ALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSL

Query:  FFWTSALDGKNRPNKGSRFRR
        FFWTSALDGKNRPNKGSRFRR
Subjt:  FFWTSALDGKNRPNKGSRFRR
TrEMBL top hitse value%identityAlignment
A0A1S3CE06 uncharacterized protein LOC1034997981.0e-4071.54Show/hide
Query:  SNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWM
        S +L+  S +V A +IA+PL S+FH R +I FSP   R S L  S N  AKS VC+AAVRPPPDSDPPP+EDP+RL G PAIFSKF DRVQIF AVLFWM
Subjt:  SNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWM

Query:  SLFFWTSALDGKNRPNKGSRFRR
        SLFFWTSALDGKNRPNKGSRFRR
Subjt:  SLFFWTSALDGKNRPNKGSRFRR
A0A6J1CXJ1 uncharacterized protein LOC1110151782.2e-4376.47Show/hide
Query:  YHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFF
        YH + ++TA  IA+PL S F   PEI FS  H RRSSLLLS NP A SA C+AAVRPPPDS PPPD+DPIR KGFPA FSKF DRVQIFFAVLFWMSLFF
Subjt:  YHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSLFF

Query:  WTSALDGKNRPNKGSRFRR
        WTS LDGKNRPNKGSRFRR
Subjt:  WTSALDGKNRPNKGSRFRR
A0A6J1H516 uncharacterized protein LOC111460643 isoform X12.9e-6496.95Show/hide
Query:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MA+PSLSTSNALYHPSRAVTAPAIAIPLFSSFHA PEISFSPLHHRRSSLLLS NP AKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
Subjt:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
A0A6J1KW20 uncharacterized protein LOC111497700 isoform X25.0e-4087.74Show/hide
Query:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKG     S     + I
Subjt:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLF
        FF VLF
Subjt:  FFAVLF
A0A6J1KZ93 uncharacterized protein LOC111497700 isoform X19.7e-68100Show/hide
Query:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
Subjt:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
        FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
Subjt:  FFAVLFWMSLFFWTSALDGKNRPNKGSRFRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52550.1 unknown protein3.7e-1135.66Show/hide
Query:  STSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLF
        S+SN   H  R    P  +   FS F +      SPL  +   L+ +  P  + AV       PP  DPPP ++   L     + S   DRV+IF +VL 
Subjt:  STSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLF

Query:  WMSLFFWTSALDGK-----NRPNKGSRFR
        W+SLFFW SAL G+      +  KGSRF+
Subjt:  WMSLFFWTSALDGK-----NRPNKGSRFR
AT3G15780.1 unknown protein3.0e-1336.36Show/hide
Query:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI
        MA  + +TS  LYH S       I  P    +H           HRR+++LL+     +          PP  DPPP ED  +L+G     ++  DRV+I
Subjt:  MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQI

Query:  FFAVLFWMSLFFWTSALD--GKNRPNKGSRFR
        F AV FWM LFFW +  D  GK +  KGSRF+
Subjt:  FFAVLFWMSLFFWTSALD--GKNRPNKGSRFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACTGCCCCCGCAATCGCCATTCCTCTCTTCTCAAGCTTCCATGCTCGTCCGGA
AATTTCCTTCTCTCCGCTTCATCATCGTCGTTCATCTCTCTTGCTCTCTTTTAATCCCTGTGCTAAATCCGCCGTTTGTACTGCAGCAGTACGCCCGCCTCCGGACTCCG
ATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTC
TTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCATAGTCGACTTTTCTCTCCTCACAATGGCATCGCCCTCTCTCTCTACTTCGAACGCTCTCTACCATCCTTCACGGGCCGTTACTGCCCCCGCAATCGCCATT
CCTCTCTTCTCAAGCTTCCATGCTCGTCCGGAAATTTCCTTCTCTCCGCTTCATCATCGTCGTTCATCTCTCTTGCTCTCTTTTAATCCCTGTGCTAAATCCGCCGTTTG
TACTGCAGCAGTACGCCCGCCTCCGGACTCCGATCCGCCTCCTGACGAGGATCCGATTCGTCTAAAAGGTTTTCCAGCAATTTTCTCAAAATTTGGAGACAGAGTACAGA
TTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCTGCATTGGATGGAAAAAATAGACCTAATAAGGGCTCTCGATTTAGACGATAGTTTCGTAAAAAA
AGCATTCTTTTGTAAAGGATTGCAGGTTAATATAAATAGTGTTAAGCTGCTTGATTTTAGCTATGTTCAAGATATATAGAAGCCTTAGACGAGGTAGATAAAGCTTGCTC
AATTAGATGTTGATACCAAAGGTAAACTGTCATGGAAAGCCCTGTTCTGTATCATATTCTTATCAAGTGTCTTAAAACTTTCCTGAATCCTACTCTAATTATTAACTTTT
TTTCTTTTTTGAACCTTGATTTGTGCACATCATCCTTGCGTAGGGCTATGCAAGTGCACATCATCCTCGTATTGCGTCATGTCAATTTTCTTTGTATTGTTTCAACTTCT
CTGATGCCTCTAGAGTGACAACGACCAATCTTTTTCACTACTAAGTTACAATTCTGTATAGATTGTTCTGGTAGGTGTTTTCTTTGACAGGGATTTGGTTGATGGATGTA
CAAGATTGTCTACGAGGGTTGCAGTTGAAACATTTGGAATCATTGTGTTGCTTGCAGCATCAGAATGATGGGAGATATGTTTGGTTCTTGAGATAATTAGAAGTCTTTGC
CACAACCTGGTTGACACATTGCCCATAGTTATACGTATGGCTACAATTTATTTTTGCATTAAATAAATTTTAAAAGTAGTGGTCAAATTGTATTTTGCTAGGTTTATGAG
AAGCCGAAAGTACTTGAGCTTTTAGTAGATGACATAGCTTTAAAAAAATTAAAA
Protein sequenceShow/hide protein sequence
MASPSLSTSNALYHPSRAVTAPAIAIPLFSSFHARPEISFSPLHHRRSSLLLSFNPCAKSAVCTAAVRPPPDSDPPPDEDPIRLKGFPAIFSKFGDRVQIFFAVLFWMSL
FFWTSALDGKNRPNKGSRFRR