| GenBank top hits | e value | %identity | Alignment |
|---|
| KAF3633692.1 DNA-directed RNA polymerase subunit beta [Capsicum annuum] | 2.6e-30 | 49.72 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
GD VGKLTPQ+ KES+YAP+DRLLRAILGI VSTSKETCL LP IGG G + + I+ K EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQKTIS------------------------GKKQI----------------DGRTGNPFEQPVIIGKPYILK
++PR+DMPY+Q S GK+ + DGRTGNPFEQPVIIGKPYILK
Subjt: MVPREDMPYMQKTIS------------------------GKKQI----------------DGRTGNPFEQPVIIGKPYILK
|
|
| KAG2271714.1 hypothetical protein Bca52824_066269 [Brassica carinata] | 1.9e-28 | 45.59 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
GD VGKLTPQ+AKES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + + I+ K EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQ-----------------------------------------------------KTIS---------GKKQI-DGRTGNPFEQPVIIGKP
++PR+DMPY+Q KT + GK +I DGRTG+PFEQPVIIGKP
Subjt: MVPREDMPYMQ-----------------------------------------------------KTIS---------GKKQI-DGRTGNPFEQPVIIGKP
Query: YILK
YILK
Subjt: YILK
|
|
| QHO01631.1 DNA-directed RNA polymerase subunit beta [Arachis hypogaea] | 1.1e-28 | 44.9 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVELLINGKEIKVGDKVAGRHGNQGILSQMVPREDMPYMQK---------
GD VGKLTPQM +ES+YAPEDRLLRAILGI VS+SKETCL LP IGG G +++ +EIKVGDKVAGRHGN+GI+S+++PR+DMPY+Q
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVELLINGKEIKVGDKVAGRHGNQGILSQMVPREDMPYMQK---------
Query: ------------------------------------------------------------------TISGKKQI-DGRTGNPFEQPVIIGKPYILK
GK +I DGRTGNPFEQPVIIGKPYILK
Subjt: ------------------------------------------------------------------TISGKKQI-DGRTGNPFEQPVIIGKPYILK
|
|
| QHO34042.1 DNA-directed RNA polymerase subunit beta [Arachis hypogaea] | 1.1e-28 | 44.9 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVELLINGKEIKVGDKVAGRHGNQGILSQMVPREDMPYMQK---------
GD VGKLTPQM +ES+YAPEDRLLRAILGI VS+SKETCL LP IGG G +++ +EIKVGDKVAGRHGN+GI+S+++PR+DMPY+Q
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVELLINGKEIKVGDKVAGRHGNQGILSQMVPREDMPYMQK---------
Query: ------------------------------------------------------------------TISGKKQI-DGRTGNPFEQPVIIGKPYILK
GK +I DGRTGNPFEQPVIIGKPYILK
Subjt: ------------------------------------------------------------------TISGKKQI-DGRTGNPFEQPVIIGKPYILK
|
|
| QHO40720.1 DNA-directed RNA polymerase subunit beta [Arachis hypogaea] | 1.1e-28 | 44.9 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVELLINGKEIKVGDKVAGRHGNQGILSQMVPREDMPYMQK---------
GD VGKLTPQM +ES+YAPEDRLLRAILGI VS+SKETCL LP IGG G +++ +EIKVGDKVAGRHGN+GI+S+++PR+DMPY+Q
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVELLINGKEIKVGDKVAGRHGNQGILSQMVPREDMPYMQK---------
Query: ------------------------------------------------------------------TISGKKQI-DGRTGNPFEQPVIIGKPYILK
GK +I DGRTGNPFEQPVIIGKPYILK
Subjt: ------------------------------------------------------------------TISGKKQI-DGRTGNPFEQPVIIGKPYILK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A109WXU0 DNA-directed RNA polymerase subunit beta | 1.5e-28 | 44.24 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
GD VGKLTPQMAKES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + + I+ K EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQ------------------------------------------------------------------KTIS---------GKKQI-DGRT
++PREDMPY+Q +T S GK +I DGRT
Subjt: MVPREDMPYMQ------------------------------------------------------------------KTIS---------GKKQI-DGRT
Query: GNPFEQPVIIGKPYILK
GNPFEQPVIIGKPYILK
Subjt: GNPFEQPVIIGKPYILK
|
|
| A0A1X9RPG7 DNA-directed RNA polymerase subunit beta | 1.2e-28 | 42.4 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVEL---------------------LINGKEIKVGDKVAGRHGNQGILSQ
GD VGKLTPQMAKES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + ++ +EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVEL---------------------LINGKEIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQ--KTIS-------------------------------------------------------------------------GKKQI-DGRT
++PR+DMPY+Q KT+ GK +I DGRT
Subjt: MVPREDMPYMQ--KTIS-------------------------------------------------------------------------GKKQI-DGRT
Query: GNPFEQPVIIGKPYILK
G+PFEQPVIIGKPYILK
Subjt: GNPFEQPVIIGKPYILK
|
|
| A0A291IB39 DNA-directed RNA polymerase subunit beta | 1.5e-28 | 44.24 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
GD VGKLTPQMAKES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + + I+ K EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQ------------------------------------------------------------------KTIS---------GKKQI-DGRT
++PREDMPY+Q +T S GK +I DGRT
Subjt: MVPREDMPYMQ------------------------------------------------------------------KTIS---------GKKQI-DGRT
Query: GNPFEQPVIIGKPYILK
GNPFEQPVIIGKPYILK
Subjt: GNPFEQPVIIGKPYILK
|
|
| A0A6H0ETD8 DNA-directed RNA polymerase subunit beta | 1.5e-28 | 43.32 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVEL---------------------LINGKEIKVGDKVAGRHGNQGILSQ
GD VGKLTPQMAKES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + ++ +EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVEL---------------------LINGKEIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQ------------------------------------------------------------------KTIS---------GKKQI-DGRT
++PREDMPY+Q +T S GK +I DGRT
Subjt: MVPREDMPYMQ------------------------------------------------------------------KTIS---------GKKQI-DGRT
Query: GNPFEQPVIIGKPYILK
GNPFEQPVIIGKPYILK
Subjt: GNPFEQPVIIGKPYILK
|
|
| A0A6H0EUS6 DNA-directed RNA polymerase subunit beta | 1.5e-28 | 44.24 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
GD VGKLTPQMAKES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + + I+ K EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQ------------------------------------------------------------------KTIS---------GKKQI-DGRT
++PREDMPY+Q +T S GK +I DGRT
Subjt: MVPREDMPYMQ------------------------------------------------------------------KTIS---------GKKQI-DGRT
Query: GNPFEQPVIIGKPYILK
GNPFEQPVIIGKPYILK
Subjt: GNPFEQPVIIGKPYILK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| A4QL11 DNA-directed RNA polymerase subunit beta | 6.0e-30 | 42.4 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
GD VGKLTPQMAKES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + + I+ K EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQ---------------------------------------------------------------------------KTISGKKQI-DGRT
++PR+DMPY+Q GK +I DGRT
Subjt: MVPREDMPYMQ---------------------------------------------------------------------------KTISGKKQI-DGRT
Query: GNPFEQPVIIGKPYILK
G+PFEQPVIIGKPYILK
Subjt: GNPFEQPVIIGKPYILK
|
|
| P06271 DNA-directed RNA polymerase subunit beta | 6.0e-30 | 41.47 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVEL---------------------LINGKEIKVGDKVAGRHGNQGILSQ
GD VGKLTPQ+ KES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + ++ +EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVEL---------------------LINGKEIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQKTIS---------------------------------------------------------------------------GKKQI-DGRT
++PR+DMPY+Q S GK +I DGRT
Subjt: MVPREDMPYMQKTIS---------------------------------------------------------------------------GKKQI-DGRT
Query: GNPFEQPVIIGKPYILK
GNPFEQPVIIGKPYILK
Subjt: GNPFEQPVIIGKPYILK
|
|
| P08036 DNA-directed RNA polymerase subunit beta (Fragment) | 6.0e-30 | 41.03 | Show/hide |
Query: RNCDA-GIVG-------GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVEL---------------------LINGKEIK
RN D GIVG GD VGKLTPQMAKES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + ++ +EIK
Subjt: RNCDA-GIVG-------GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVEL---------------------LINGKEIK
Query: VGDKVAGRHGNQGILSQMVPREDMPYMQ------------------------------------------------------------------------
VGDKVAGRHGN+GI+S+++PR+DMPY+Q
Subjt: VGDKVAGRHGNQGILSQMVPREDMPYMQ------------------------------------------------------------------------
Query: ---KTISGKKQI-DGRTGNPFEQPVIIGKPYILK
GK +I DGRTG+PFEQPVIIG PYILK
Subjt: ---KTISGKKQI-DGRTGNPFEQPVIIGKPYILK
|
|
| Q3C1G7 DNA-directed RNA polymerase subunit beta | 6.0e-30 | 41.47 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVEL---------------------LINGKEIKVGDKVAGRHGNQGILSQ
GD VGKLTPQ+ KES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + ++ +EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVGVEL---------------------LINGKEIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQKTIS---------------------------------------------------------------------------GKKQI-DGRT
++PR+DMPY+Q S GK +I DGRT
Subjt: MVPREDMPYMQKTIS---------------------------------------------------------------------------GKKQI-DGRT
Query: GNPFEQPVIIGKPYILK
GNPFEQPVIIGKPYILK
Subjt: GNPFEQPVIIGKPYILK
|
|
| Q4VZP1 DNA-directed RNA polymerase subunit beta | 5.4e-31 | 44.24 | Show/hide |
Query: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
GD VGKLTPQMAKES+YAPEDRLLRAILGI VSTSKETCL LP IGG G + + I+ K EIKVGDKVAGRHGN+GI+S+
Subjt: GDGRVGKLTPQMAKESAYAPEDRLLRAILGILVSTSKETCLNLPILIGGVG--------------------VELLINGK-EIKVGDKVAGRHGNQGILSQ
Query: MVPREDMPYMQ------------------------------------------------------------------KTIS---------GKKQI-DGRT
++PREDMPY+Q +T S GK +I DGRT
Subjt: MVPREDMPYMQ------------------------------------------------------------------KTIS---------GKKQI-DGRT
Query: GNPFEQPVIIGKPYILK
GNPFEQPVIIGKPYILK
Subjt: GNPFEQPVIIGKPYILK
|
|
